Gene detail

Detailed information of ENSNQRP00000012119.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000015129

CCTTGCTTTTGACTGGCCAATTTAGTCAAACAGCAAAGAGCATCTACCATGCGCTGGACTCACACAAGTGAGCCTGCTTGCACGCTACTCTTAAACAGACATAGCAGAGTATTGTTTTTTGGTCGTTAATCATCGTACTCAGGTATTTGTGGCGTCAGTAATAAATGTACGGTGTTGTCAATTCTTAAGCtgttataattatattttaataCCACACTCTCTTTTCTTCTTCAACAGTTGCAAATAAGCATTGTCCTCCATCGTACATGCAACCACAAGATTTAGATACAGTTCCTAAAGATTCGAAAGGAACAGAGAAAAACTTGGAAGACCCTATGTTAAAGCTGCCAAATCCACCCTGCACGAACGAGTGTTTTGATTGTATATCCGAAGAGCAGGAATGCGATGGAGTAACTGACTTACCGGTTGAAGAGGGAATGCATCGAGGTGGATGCACCTTCGTTGCACTTCGAAAAATTGAGCAGGCAACAAAAGAGTCGATCAGGACAACTGATCGGCCGTCGAACTTAGAGACCATTGCTCGTGAAAGAGGCTTTACAGTTTCAGATAATAAAGGAGCTGGAAACTGTATGTTTATTGCACTCTCGGAACAGCTTCGCCTGGTAACAGGAAGGAGAATCTCGCATAAAGATTTACGCCGACTTGTTGTTCAATACCTTAAGGAAAACCCCACGACGCGAGACGGGACACACCTCTTCCACTTTATTGATGGATATCCATCGTGGGATGCCTACCTCACAGACATGATGAAAGATCATATATGGGGTGATCATCTGATTCTCAACGGTGCGGCAAACTGCTTTAAAATTTGCGTCCACGTGATCAGTAGTCTGGGGCGTGACCATGACGAAATGATGTGCGAAGAGTTTGATGTTACTGGTAGCAACCGGCTTGTGCTAGGTCACGTGGATCAGCTTCACTATGTTAGTCTCATTCCGCATAAAGGAGGGCAAGGACAAGCCAGAGCCCCAGTCGATGTTAATGGAACTAACGCGGAGCAGAGAAGCTGCCCTAAATGTGGCAGGCTATTTGGAGAAGTTGTCTTTAACAGACATGTCATTTACTGCAATCCATCATCAGATTCCATAGGAACCACAGTTGCGCCAGAGACAAAGGGGGGAGGCCCTTTGTTAAACCTGAGAAAGCAACCCAGCTCTCACGATTGTTTTGAATCAGTTGATCGTGTAACCCATGAGCAGcCCTCAACTGAAGGATGGCGCGAACGAGAAAACCTTATACAGCTCTTAACTGAAGAGAGGCGTCAACGAGAAACCCTTAAACAGACGTTAAAGAAGATAAGAGAAAGACTACAGTGCAGCCTATCAATGGACTTGGTTCGGTGCCCACTTACCCTAGTGGAGTGTGGGCACTCGTTTTCCAAACATTTGTCTCAAATATGGGCCAGggAACGAGGAAATGAAACTTCTTGCCCTCTCTGTAGGCAGCCTTATGGTTTAACAACGGAAGTGGTGATGTTGCAAAACATTGTAGACGTTTTTAGGGAGGATAACCCGTTCAACGAAGAATTTGAAGAAGAACAAGACGGTGATTATGAGGGGCGTGAAGGAGGTGGTCAAAGAGGGAACTTACCAGTGATGGAGGAACTTGAAGGAGATAGCGAAAGAGTGAACGTACCAGTGATGGAGGAACATGAAGGAGATGGCGAAAGAGTGAACGTACCGGTGATGGAGGAACGTGAAGGAGATGGCGAAAGAGTGAACGTACCAGTGATGGAGGAACATGCAGCAACTGGCGGAAGAGTGTACGAACTTCTTGAGTTACCTGGGGACGAGGAACTCCCAGAGGGCGCTCTCTGCTAGTAGCCTGCAAACAAGTTCATCATGATgatgtacataattttttttacaaggaaTCACAgcatgaaaattcaaatttacgTGAGCGTAATGACAACGTAAAGTCAGCGTAtagttgaattttacacaacttTACGCTTCCTTTACTCTACGTAAAGTTCAGCTTTACGGCATCTTTACGCGTACATATAAAGCTggcgtaatgaaacaaaaac

Protein

Gene family

Family type	Membership / link
Ubiquitin family	DUB\|OTU\|OTU · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity RING\|U-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338 all species →	OTU	OTU-like cysteine protease	Family	Interproscan
PF12861 all species →	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003323 all species →	Domain	OTU domain	Interproscan
IPR050704 all species →	Family	OTU domain-containing ubiquitin thioesterase	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR024991 all species →	Domain	Anaphase-promoting complex subunit 11, RING-H2 finger	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12419 all species →	OTU DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0097602 all species →	Molecular Function	cullin family protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000012119.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.