Gene detail

Detailed information of ENSNQRP00000015228.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

ENSNQRT00000018831

ATGGATGGTTTGTACCTGAAAATAACACAAGAATTTACCCCTGACCGAAAAGAAGCGAGGTTCGGTGGGAAAGAAGCACCGATGGCGGTTGAAAAAGGTGATATTATTTTCGACGTTCGCAAGCTCGGGGATGGATGGTTGTGTGGGAAGAATATAAACAGcggaaaaacaggaaaattcccCGAAAATTGCGCGGCCAAACTTTCGGGAAGTAAGAATGGAAACCCTGAATCCGACAAGAAAGATGAAAAACCTGCTGAAAAGAAAGACTCAAGCAAGCCCTCGTGGCTTCAAACACGAGCGAGTTCCAACACACCTTCTGCCAAGAAAACGCCTGAATATCCTAAACCTTTCGCCGGAAATATCAGGACGTCGAGATTGAATgacaaagaagagaaaaaggaaacttcGGGAGATTCTGGAGTTGTGGAAGATTCACCTGAGGGAAATTATGACAACGCTCCCGATGAACCAAAACCAGCGAACCGCGACGCGTTGAAAACCGGAAACAATGTCAAGGACGATAAACAGAAGGAACCGAGATCACTAGCGACAAATCTTCAGACAGATCACAAACAGAAGCCAGGAGCAGCCAAAAGGAGTGACCCAGTGAAAGAAGCGAAAGAACCAGGCAAGGCTTCAGGTAGACCTTTTGGATTAAGTTTGAGGAAAACTCGTGACGCTTTGAAACCGACGGAATCGGAAACGAAGGCAACTCCGAAGACGGGCACTAATTCGAGAAATTTCCCGCGTTCAACCCCCGCTCCACAGAAGGCTTCACAGGAGGATTTAGAAGAAAATTACGAACCTGTTGAAAAGAAAAGCGAAGAGAAAGGGCCATTGCTGTCTAAGGTAGCAACTAAAGCCAGTCAACCGAAGAAGGAAGCGAAAGCAGCTGACGTTAAGGCGGCAAAAATTAACCCGATCGATAACCCGAAGAAAGAAAGCGAGAAAAATCAATCAAACGTGACCACTACTGTCGCTGCTGGGGGCGCCGGAGTGAATATTCAAGAAAACCCTCTCGGGAAAGACGAAGGCAGTATTTATCAAGTTCCTGGTGTCGCTGGGCCGCCAAAACCGAAGCGAAGTTTTCCGTCAGGTTGCTCAGAGTGTAACGAGCCTCACATCTACGATACACCGATGCATTACCAAACGCCACCCGGGTCTCCGACCGCGGCTGACAAACGAGATGGGCGCGAAGCAAAGATCGAGAAACCGAAAGAGGCGAAACGAAAAAGCGGCTCGACAAGTCTGAAGCCAACATCATCAGTGATTAAGAAAACCAAGGAACATATAAAACACCGCATGGCTTCGTACGAGGACATTGAGTTAGAAGGTAGACGTTCGCAAGAGAGTTTGAAAGATGCCGAGCACACGGCTAAGCGAGAGAAAGAGAAGCTTCTCACGCCGAAGAAGCGACCCAGGTTGCGCATTTTACTCGGCATACTTTTAGGTTTATTACTGGGTGTGTTCGTTTTCCTAGCGCTATATCTCCTGGCCAAACTGCACGTTCTCTTATGCGCCATTTCCGCTCTGATAATCAGCATTGTTGTTGCTACAGTGTTCGGGTTCCTCGACAAAACTCGATTGCAGTGTATCGTGCTACTCATTTTCCCGAGCTTGTTTGCTGCAGGCGGAAAAATTGCGTTGTGGTTGCTGATCACGTATTTCATAATATCAGGCCCagtttgcaattttattaacAACGTACGAATTGTTGCTGTTAGTAGAGAATGCTTAATGAAAAGTGACAGTTTAGCAGACAATAGCAGCATTGATCCGCCTGGATTTGTCGCCGTGAATAACAACAATCGAGCCGTTGTACAGCGATTGCGGACCTACGAGAACCTCTCCCACACACTTCTGAGTTACATTAACAACTCTTTGTCGTTTTCATCATCTGATCGGAATGATTATTTATCTGGACACGACAATTCGTCATCTGGGATAATTTGCATGAACGCTCTTCAACGTGCCCACAACATCTGCTCCTCCGAGATCAACAGTATTTATGAAGAATGCAGCAAAACACCCGCCTTGAAGACAAAATGCGAGTTCATCACTGCAAAGAACGCGTGCGATCACTTATCAAACACTTACACGAGAAATACGTGTGACAACATAAACACTGTTAATATCGACACCTTGTTACATATTAAGAAAATAGTAGAACAAAGCCCcgagaaaatcaaaacaaaagatgataATGTCACTGCTGTTACACCAGGAGAACTTTGTCAATTTATCCGGATTGTCGAGATGCTTTTGCCATTACTTTTATTGGTTTTATTTTACGAAGCGTACAGGTATCACAAGCTCTATCTCTCTTGCAATGAATTTGATAATCACTACCTCACGCTTCGGTTCAAATCCATCGAAGACATGCGCAAGTCGAGCGGCGCCGCTGACTTACTGGTACCGCTGAAGAAGGCTGAGCTTGAGAAGTTTGTTCAGCCCACTGCTTGCCGGCTGGCAGAGTCTGAGAAGAAAAACGTGCTGAAATACCTGCTAATTTACCTGATTTACTTGCTGTTTGCGCTGATGTTCATTTTACTAGATCATTTCTTCTATGTTGTTATCACTCACCGGGAACCGCCGTCCAATACAGCTGAAGAGTGTCATGGAAAACTGAAGAGTCCTCAAGAGTTTTACACTATCACTTTGTCAACTCTACTTGGAGTGTTACTGCTGATTATATTGCTTCAACCGTTCGCGCTTCGCTTGCGTCGCTTGATCTCTTCGCGATTCTACCctagaagagagaaaaaacgcATTGCCTATCTGTATTACAAACTCCTCGAAAAGCGCAAGACGTTTTACAAATCTGTCATTGAAAACATGAATAACTTCTCAGAGGAAACTGAAATTCTTAATAGACTTGATGCAGTTTTGGTTCTCTGCAACAATTTTAGCTGGTTAAAAACAGTGCTAGAGTTCGTAGGAGTGAACATTCGCCGATGCGCTGTTTGCGGAGCAGGAGTAAATAGGAAGTATATTTTCTGTGATACTGAGGACTCTTTCCAAGACCGTGAAAATCTTATCAATCTTTTTGCTTGTTATGGTAAGGTGTACGCCTGGGATGTAGATGATGTAATCAAGATGCGTTCACAGTATCGCATAGTTGGCTCTCTGATAGGATCGCTACCTCGCAAACCGAGACAAAACAATGCTTTCTCTTTGCCGCTTCTTCTTTCTCGAGAGGAAACCACGTTGCTGCTAGATAAAGGTTTCGCCAGAATCTTTTACATGCCAAGAAACCTACCGAAACCATCAAGTGAATTGGTTGGGAAGTTTAATGAGCTACGCAAAGAAAGTGTCATCAAGCAAAATGAGCAGTTTAAAAAGATGcaagaagaaaagagaaaggaaCTAGCTGATGTAATAGCTGAtggcaagaaaagaaaacgagaaaACAAGCGAAAGAGCGGAGAGGTTACAGTTGATCACGAAGATACCAATCTTGCAAAAAAGCTAAAGAGCGAGGAATTGAACAATGAGAGTTTTGAAGCCAAGGAAACTAGTGAGAAGAAAGACTTAATTCAGTCGAATgattattgtaaaaaaatcagTAATGAAAATGTTAATGAAAGCTTTGAGGGATCATGTGTCAAGTTTATCACAAAAGAAGCTAATGAAACAATCCCGACCAATGCAAATGCTGATCAGGGGAATCACGGAAATAAACCTGTGAATGAGACTGGACTACAAACTACAATTGATTCAGATACTAGTACCAAAGGACTAAACAGTGTTTGTGACATGGGAATATTGGTACATATTCCTACGGTTATGCCGCAATTGCTGCCTTCATTTCAACTTGCAGACTGGACATATCCTCAAACGAGTTGCGAAAAGCTACGTTACCAGGTGTTTGTAGACCTCTGGGAGAAGGGATATTATTTAACGTCTGGCATTAATTTTGGAGGAGATTTCCTCGCATATCCAGGTGATCCCATTAGGTATCACTCCTTTTTCATCGTAATTATTGTTCCCTGGGGGAAGAAAATTACACCATTTGAGATCATATCAGCTGGCAGACTAGGGGCTAGTGTAAAGAAAACTGCACTTCTTTGTTCAGTAAGTGATGAAACAGGCCAGGTTATATACACGTCAGTCAAGTGGAGTGGAATAAGCTGA

Transcript

ENSNQRT00000018831

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01974 all species →	tRNA_int_endo	tRNA intron endonuclease, catalytic C-terminal domain	Domain	Interproscan
PF07782 all species →	DC_STAMP	DC-STAMP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036167 all species →	Homologous_superfamily	tRNA intron endonuclease, catalytic domain-like superfamily	Interproscan
IPR006677 all species →	Domain	tRNA intron endonuclease, catalytic domain-like	Interproscan
IPR011856 all species →	Homologous_superfamily	tRNA endonuclease-like domain superfamily	Interproscan
IPR006676 all species →	Family	tRNA-splicing endonuclease	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR012858 all species →	Domain	Dendritic cell-specific transmembrane protein-like	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13070 all species →	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006388 all species →	Biological Process	tRNA splicing, via endonucleolytic cleavage and ligation	Interproscan
GO:0000213 all species →	Molecular Function	tRNA-intron endonuclease activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000379 all species →	Biological Process	tRNA-type intron splice site recognition and cleavage	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000015228.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.