Gene detail

Detailed information of ENSNQRP00000016050.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000019843

ATGGTAAGGCcacttttcggaaattccaaccgaaaattgaggagtacgttttgaggtagtccATTCATTCCGGTTGGTAAGAACCAAATGGAACGTTGCTCACCATTAACCGGTTCCTTCTCGGTTCCAGACTTACGCTACACAAATTGCCCTgtttttggattcaaaccgtAACGGATGTGGCGTTTCTAAGGTAAACTGATAAATCGCTTACAATTATGCTTTCGACACCCCAGCCGGATTTTTCTGTCgaatggtaagcaccccaggTTACCTTTTAGCGGATGGTCCTTTGCCTTACcgggaaactggggagaggatCGGAGACGGGGACAATTTCCAAACGTAAAATGGCCGCCACGGTAAAGAAAGACGGTATTCGTAAGAGACGATTCGCACAAATTTCTACCAAGCATGCTCTCTCTACACCCTACAGTCTTCAATGGCCAAAGATGACACAAAAAGGTGGCAACAAACTGATATGTGATGAGATTGTAAGAACCCTAGAGCCTCTTCAGTTTCAACAGCTTTGCACTAGAATGCCGACAGCTGTGGCTGGAGAAAATGAGGAAACAGCAGCTAGAAGATTGGAGGAACAGAAAGAAAGAGCAAAGAAACTAGAGCAACGATCTGCTCTTGAAATTGGGCTCAATCAAGTAATGAGAGCACTAGAAAAAGGGAGTCTCAGATTAGTGCTGGTTGATGGATCGATTAAGCCTACTACGCTGTTAGAGCACCTACTTGTACTGTGTGTAACACGCAATACTCCTGCCTGTGCACTTGTTGGCATGGGATTGTCTGTGATTCCAAAGTTATTAGGGGTCCGTAGAGTTGCAGCCTTTGGATTCAAGCTCACTGATAAACCTACATTGTTTGATGAGCTGGTTCATTTTATCAAAGTTAGAATTCCGCCGCTCTATGTACCTTGGTTGCAACCCAGTAAGGATGTAAGTGAGCAATCAGAAGAGGCTTATCATGAAGTTGATTCTGAGGATGAAAATTTGCCTGGCATTGAGGAAATGCAAGAAAAACCAcgaaaaaaagttagaaaactAACAAAGAATGCAGAAGAACTGAATACACAACCTGCAGTGGTAAGAAATGTTGCGGTTGACACTGAAAGACTCGCAGAGAACTCAGGGATTGCATTAGAGTACACAGAAAACCCAAAAGCGAATACTCCAGTAGGATTAGAAAACACAGGACAACCAGGAAAAGAACAGCTACCAGACGAGGAACTAAAGGAAGTTCGTGGTACCATTGATAGTCCAACTCCTGGTTTCAAAAGGGATAGTACTGTGCCCGAgaatgaaaacatagaaaagaaaaagagaagaagaagaaacagaagaaaCAAGGGGAAAAAACAGACAAGTGAGGCACCAATGCAACTGGTGTATCTTAAACCCTGTATTAAAAGTTTTGACACTACACCTAAAGACAAAGGAGACCagacaaagtaaaataaaaaaatatatatttattatttattctgtTGATGTAACAAGTTACTGGGTTTAATTGGCGcaataacaaaatcattaattaTCTTGGCCACAGGGTAGAGTTAAATGTAAAATATCATTTCCTaagcaaaataattaaagacTTTAAAAGTGAACTGTCGGTCATTATTGTAGCTGTTACAAAAGACGTGCGTGCTGTTTGCAGCGACAATTTTTTGTGGTCGTGTGgccattattttcttttgtttcaaactcatcatcatacatcaccatacgcaaaaacaaaagaaaataaaatttaaaccaaggataaaattgaaccacaacgtATGAAACATTTGGGAAAATGGCAAATATCTCTCTCTATCCTTGGGCCAGTGCTATGTTCTGTATCGTATGTTTTAAGCACATTTTTGGAAATTATGAGCGTTACTTGGCTTGTAAACTtgacatttaacaattattctttgaaatcgaggtgaatagtggcaaaatatttaccgagccgcgaaagcggcgaggtaaatattcccaaagccactattcaccgagattgagaagaataattgttttagtatatacacacgaagtgatctcaacaaaatcagaaaggaaaccattcaaaagtaggatttgattgacagatcaaatcacgcgtaagtttaaaaatagatctttgcagaattttcaaacatggcaattcacaagtttactcatttcgcaaacaacagcctaatggcttcaatggaatcgctaaaagtttgaactgtttccttacctgagaaaaaaagtagagctgtgttgttttctgttgactcgccaagtttatagccaaaagggcatgttgtg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08228 all species →	RNase_P_pop3	RNase P subunit Pop3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029064 all species →	Homologous_superfamily	Ribosomal protein eL30-like superfamily	Interproscan
IPR013241 all species →	Family	RNase P, subunit Pop3	Interproscan
IPR042848 all species →	Family	Ribonuclease P protein subunit Rpp38	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46948 all species →	RIBONUCLEASE P PROTEIN SUBUNIT P38	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0000172 all species →	Cellular Component	ribonuclease MRP complex	Interproscan
GO:0001650 all species →	Cellular Component	fibrillar center	Interproscan
GO:0001682 all species →	Biological Process	tRNA 5'-leader removal	Interproscan
GO:0004526 all species →	Molecular Function	ribonuclease P activity	Interproscan
GO:0005655 all species →	Cellular Component	nucleolar ribonuclease P complex	Interproscan
GO:0030681 all species →	Cellular Component	multimeric ribonuclease P complex	Interproscan
GO:0033204 all species →	Molecular Function	ribonuclease P RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14523	RPP38; ribonucleases P/MRP protein subunit RPP38	EC:3.1.26.5	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.