Gene detail

Detailed information of ENSNQRP00000018462.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

ENSNQRT00000022880

ATGGCAAGACATAGAAATTACAGGAATTATTCCTACGAAGATGACTTGTCTGATGACGTGTATGGACATTCAGTTGAGGATTATGATTTGGCTGTGTCACCAACAACTGCTGAGCAGTTCATATTCAGACGCAGTAACAGTCGGGACCCAAACCTCTCATCATACATGGCTGACAGGTTTGGCCGAGTAGATGAAGAGGATGAGGAGGAGTCTGAGGAGGAGACATTTGCTAGTTCCCAGGACTACAGAAGACCCCAGCTAGATCCCACAAGTGAAGCAAAATTATCATCTTGTATGGAtcagcttcattcaattcttgGAGAGACATTACATGAACCTACAGCAGTTACAGCAGTTTTACAAAGTAACTTTGATCTAGAGAGAGCTCTGGACCAAATTCTTAGTCAAGGGGGAAAACAAGACCTTAAGGCAAATTTGGATCCAGATGAGAGTGAAGACACCTTCAGGGCTGGAAGAAAGGAGGTAAAACTACTACATCCAGTGCAGAATCATGTCTCTTTGGATGCTAAGAAGGCAGAAGCTGCTCCAGTGGTCACCTCTGTGCAAGACAAACCTGTGATAGGATTCTCAACTCCTCCAGTAAACAACAAGAAATCTAGGGAAAGTTCTCCTGAAAATGAGACAGAAACAGATCAGagacaagcaaacaaaaaacaaatggaaaaggACCAGTTGCTCGCTGAAGCACATGAGGAATATCACAAACGACGGAAAGGAAAAACTCTTCTCAATTTAGTGGTCATTGgtcATGTTGATGCTGGCAAAAGCACCCTCATGGGCCATCTTCTATATCGACTTGGAGACGTTTCCAAGAAAGCAATGCATAAATATGAGACGGAATCTAAAAAGGCTGGTAAGGCTTCTTTTGCTTATGCCTGGGTGCTGGATGAAACTGGTGAAGAGCGAGAACGTGGTATTACTATGGATGTTGGTTTAACAAGATTTGAGACTGAAACAAAGCTCATCACACTCATGGATGCACCAGGACATAAAGATTTTATCCCCAACATGATCACTGGAGCTTCACAGGCTGATGTAGCAATCTTAGTGGTTGGATCCAGCACTGGAGAATTTGAGTCCGGATTTGAAGCTGGAGGGCAGACGAGAGAGCATGCGCTACTTGTCAGGTCGCTGGGTGTGACGCAGTTAATTGTGGCTGTCAATAAACTTGACAATGTTGGCTGGTCAGAAGCTCGATATAATCATGTCGTTGGAAAGCTCAAGCACTTTTTAAAACAGGCAGGATTTAAGGATTCTGATGTTGTTTATGTACCATGTAGTGGTCTTACTGGTGAGAACCTTACAAAGTGTTGTAATGAGCCCCTGCTCCGAAAGTGGTACAACGGGCCTACTTTATTGGATAGAATAGATAATTTTAAACCTCCAAAAAGGGAATTAGAGAAACCGTTTAGGTTCTGCGTGTCAGATGTTTATAAAGGTATGGGCGCTGGCATCAACGTTACCGGAAAATTAGAGGCTGGAAAACTTCAAAACGGCGACAAGATCATGGTCATGCCTGCTGGGGAACAAGGCTTGGTAAAAGCCCTCTCCATACATGACGAGCCAGTTCAGTTAGCATGTGCAGGGGATCACGTGACACTGACGTTAACTGGATTAGACATGATGCATGTTGGagtGGGAAGTGTTTTATGTCCTCCGAGCTCCCCAATAAAATGCACAATGAAACTGAAGGCTCGCATTTTAGTTTTCAACATTCGTGTTCCTATTACAAAAGGTTTTATGGTATTGTTCCACTACAAGACGTTAAATGAACCAGCCACTATCCACAGGCTCTGTAGTGTCTTACACAAGAGCACAGGAGAAGTTCTTCAAAAGAAACCCAGATGTTTAACGAAAAATTCCAATGCGGAGGTAGTAATTCACACATTCAAACCAGTTTGCGTTGAATTGTATAAAGACTATAAAGATCTTGGAAGATTTATGCTGCGCTACGGTGGTGAAACAATCGCTGCTGGAGTTGTTACAGAGATTTTATAA

Transcript

ENSNQRT00000022880

AAATTGGTTTGGTATACAGTATTTTATAGGACAATGATGGCGCATGATGGTTGTTTGTTCGAGTGAATTTTCCTGCTATTTCGTGTCACCCGTCTTTTACGAGAAAGTTTGTGCGCGTATCCCGAGCGAGAGGACTCTGGGACCTAGTCATCTTCGATCAAGTTCTGCACCAAATCGAGGTTCTTTCTCTTTGCACTTCAAGATGGCGGAATGGCGGGTGTCTTCGGGTGCTCTCATTGTTTGGTACATGTTTCACCACATAAACGACCATATTTGCTGAATTAAAGCACGCCGAGTAAATGGCAAGACATAGAAATTACAGGAATTATTCCTACGAAGATGACTTGTCTGATGACGTGTATGGACATTCAGTTGAGGATTATGATTTGGCTGTGTCACCAACAACTGCTGAGCAGTTCATATTCAGACGCAGTAACAGTCGGGACCCAAACCTCTCATCATACATGGCTGACAGGTTTGGCCGAGTAGATGAAGAGGATGAGGAGGAGTCTGAGGAGGAGACATTTGCTAGTTCCCAGGACTACAGAAGACCCCAGCTAGATCCCACAAGTGAAGCAAAATTATCATCTTGTATGGAtcagcttcattcaattcttgGAGAGACATTACATGAACCTACAGCAGTTACAGCAGTTTTACAAAGTAACTTTGATCTAGAGAGAGCTCTGGACCAAATTCTTAGTCAAGGGGGAAAACAAGACCTTAAGGCAAATTTGGATCCAGATGAGAGTGAAGACACCTTCAGGGCTGGAAGAAAGGAGGTAAAACTACTACATCCAGTGCAGAATCATGTCTCTTTGGATGCTAAGAAGGCAGAAGCTGCTCCAGTGGTCACCTCTGTGCAAGACAAACCTGTGATAGGATTCTCAACTCCTCCAGTAAACAACAAGAAATCTAGGGAAAGTTCTCCTGAAAATGAGACAGAAACAGATCAGagacaagcaaacaaaaaacaaatggaaaaggACCAGTTGCTCGCTGAAGCACATGAGGAATATCACAAACGACGGAAAGGAAAAACTCTTCTCAATTTAGTGGTCATTGgtcATGTTGATGCTGGCAAAAGCACCCTCATGGGCCATCTTCTATATCGACTTGGAGACGTTTCCAAGAAAGCAATGCATAAATATGAGACGGAATCTAAAAAGGCTGGTAAGGCTTCTTTTGCTTATGCCTGGGTGCTGGATGAAACTGGTGAAGAGCGAGAACGTGGTATTACTATGGATGTTGGTTTAACAAGATTTGAGACTGAAACAAAGCTCATCACACTCATGGATGCACCAGGACATAAAGATTTTATCCCCAACATGATCACTGGAGCTTCACAGGCTGATGTAGCAATCTTAGTGGTTGGATCCAGCACTGGAGAATTTGAGTCCGGATTTGAAGCTGGAGGGCAGACGAGAGAGCATGCGCTACTTGTCAGGTCGCTGGGTGTGACGCAGTTAATTGTGGCTGTCAATAAACTTGACAATGTTGGCTGGTCAGAAGCTCGATATAATCATGTCGTTGGAAAGCTCAAGCACTTTTTAAAACAGGCAGGATTTAAGGATTCTGATGTTGTTTATGTACCATGTAGTGGTCTTACTGGTGAGAACCTTACAAAGTGTTGTAATGAGCCCCTGCTCCGAAAGTGGTACAACGGGCCTACTTTATTGGATAGAATAGATAATTTTAAACCTCCAAAAAGGGAATTAGAGAAACCGTTTAGGTTCTGCGTGTCAGATGTTTATAAAGGTATGGGCGCTGGCATCAACGTTACCGGAAAATTAGAGGCTGGAAAACTTCAAAACGGCGACAAGATCATGGTCATGCCTGCTGGGGAACAAGGCTTGGTAAAAGCCCTCTCCATACATGACGAGCCAGTTCAGTTAGCATGTGCAGGGGATCACGTGACACTGACGTTAACTGGATTAGACATGATGCATGTTGGagtGGGAAGTGTTTTATGTCCTCCGAGCTCCCCAATAAAATGCACAATGAAACTGAAGGCTCGCATTTTAGTTTTCAACATTCGTGTTCCTATTACAAAAGGTTTTATGGTATTGTTCCACTACAAGACGTTAAATGAACCAGCCACTATCCACAGGCTCTGTAGTGTCTTACACAAGAGCACAGGAGAAGTTCTTCAAAAGAAACCCAGATGTTTAACGAAAAATTCCAATGCGGAGGTAGTAATTCACACATTCAAACCAGTTTGCGTTGAATTGTATAAAGACTATAAAGATCTTGGAAGATTTATGCTGCGCTACGGTGGTGAAACAATCGCTGCTGGAGTTGTTACAGAGATTTTATAAATAACAGAGGTTTATTGAGGAGAGCCTTACATTCAGACCGCCTAAGGAAGACAAGAGTTGACATGCCTATAAGATCGCTTGAACGGGAAATTGAATTTCGTTTTCTTGTTGACTCCCTGTCGGCAACAGAAAAAAACTCAGGATGGCACCCAAATAGAAGAGACAGTAAAGTTTTAAAAGATAGGTTGTATGACAATAAGTCGCTCGAAATGCTGCGGAAAGGAAGACATGTGagggtaaaaaataaataaaatggaaatttttacCGTTACAGACTCATTTGTTTCTTCTGTCGTTTGTCGCGGCTTTAATCTTGCCTGCCTACAGCCGCATAATGTACCAAGGCGTCGATACGTTCACCGCGAGTCTTTAATGATAAGAATGAGAATTAAAGGTCTGTTTTTTAATATGGGTCAAAGCATATTCTCTCTTCACCAAAGTGATTAATTTGGTTTTTGGCACACTAAGTGAAAACCTTTCTATTTGGCGCCTCGTTTGTTGTCTAgctgattttcatttaaaaatttcaggTAATATTCTTAGGTTCGTTGATTACATAGGAAGAGGTCGTTAACCACACCGATGTAACTTATGCAAATGAGCGGCAAATTCTTATCGCATAGGTTTATCCTCTCCAGTTAACGACGTGACTGTTcctaacgttttttttttttttaatggcaaCATACTGAGTAAacagtgttttcttttttattaagaTCTCCAAAGCTGTCTTAAGCAAGATCTGACTTTCCGGTTCAATTTATTAGTTTACACAGAGAGCTCTTTAACAAGCGCTCTATGAAAAAGAGCATTTCCGCCATGCTCTTTCACAGTGACATAAGTGCACTAAAACACTCTTATAGCTGTGTCCCCTCTGCTAGTGATGATTTCGTAgatttcgttttgtttgaaTAATTCACCGATTTCTTCAGCGACTGCCTGTAAGCTGGCAATCGCCATGCATAAATAAAAGCATCGAGTGCCACTTTGAAAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08938 all species →	HBS1_N	HBS1 N-terminus	Domain	Interproscan
PF03144 all species →	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF03143 all species →	GTP_EFTU_D3	Elongation factor Tu C-terminal domain	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009001 all species →	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR050100 all species →	Family	Translation factor GTPase superfamily members	Interproscan
IPR015033 all species →	Domain	HBS1-like protein, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR037189 all species →	Homologous_superfamily	HBS1-like protein, N-terminal domain superfamily	Interproscan
IPR004161 all species →	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR004160 all species →	Domain	Translation elongation factor EFTu/EF1A, C-terminal	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23115 all species →	TRANSLATION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14416	HBS1; elongation factor 1 alpha-like protein	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.