Gene detail

Detailed information of ENSNQRP00000020823.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000025725

CACTGATTACTTCAATGGTTATATATATTTCTTTCAGGTCGCACAGTTTATACTGGATGATGCTATTGAACAAGGTCATGGATCATTGTGTCGAATCATCTGCACACAACCTAGAAGAATAAGTGCTATTTCGACTACTTATTGGTACGAGTCACATCATACTTGATGAAATTCATGAACGAGACGTGTTATCAGATTTCCTGATCATCATTGTCAGAGATCTTCTACCTAAAAGGCCTGACTTGAAACTGATCCTGATGAGTGCAACGTTGAATTCACAGATGTTCTCTGCCTATTTTGgaaATTGTAAGATGTGTCATATTCCTGGCTTCACTTATCCTGTCCAGGAGTTTTTTCTTGAGgaaattattgaaaaaacaGGTTATCACGTGGCAGAACGAAGCCAGGGCTTTAACAAAAGACAACCCAAATGGATGAAATATAGAGGAAGAAAAAGTATTGCAAAAGACAGGAGATTAGAAAAATCCAATGCATGGCTAGCAGAGAGCGGCAGCCAAGAGGATGACGAAGAAATTGTTTGGCAGGAGTATTTACACTCAATCAGAGATAGATTTTCACCCGGTACTATCACCACCCTCCAAAACATGGATTTAGAGAAGATTGACTTGGGGCTTCTCGTTAGAGTAATCAAACACATCTCTCTTCAGATGGAGGACGGGGCTATTCTTGTTTTCCTTCCTGGTTGGGACGATATCAGCAAACTTCATGACAACTTGAAGAAGGAAACGCTTTTCTCTTCAGataAATTCCTCATTATTCCGTTACATTCTATGATGCCATCAGCCAGCCAAAGAGAGGTGTTTGATCGTCCACCAAAAGGCGTGAGAAAGATTATTATCGCCACCAATATCGCAGAAACCAGCATCACTATTGATGATGTGGTTTTTGTCGTGGATGCTGGCAAAGTAAAGGAAAAGACGTACGATGTGAACAATAAAATTGCTTGTTTACAGCCAGTGTGGATCAGCAAAGCTTCCTCGCTTCAAAGAAGAGGTCGCGCAGGAAGAGTCCAGCCTGGCTACTGTTTCCATTTGTTCACTCAACACCGTGCTGAGGCTCTTGAAGATTATCAGCTGCCAGAGATGATGAGGACACCCCTCGAAGAATTGTGTCTTCAGATAAAGATTCTTAAACTGGGCATGATCAGACCCTTCCTGTCCAAGGCCCTGCAGCCTCCTGAGGAACAGGCCGTCATCAATGCACTGGAAGTACTTCGGCAATTGAATGCACTGGACGGCAACGAAGAACTGACTCCTCTTGGTTATCACTTAGCGGCCTTACCTGTCAGTCCACGAATCGGCAAAATGATCTTATTTGGTGCAATCTTCTCTTGTTTGGATCCTGTGCTCACTGTTGCGTCCGTTTTAGGATTCAAGGATCCTTTTGTCTTCCCACTGGGCTGGGAACAGTCTGTGAGAAATAGACGTGAAAGGGACTTCTGCTGGCGAAACTTCCTTTCTATGAATACTATGAAGATGATAAAAGATATGAAGAAGCAATTTTCTGGATTACTTCATGAGATTGGATTTCTCGATTCAGCTGATCCTAAGGCGCCTGCCGCCAATCGCAATTCAGAAAATTTAAAGCTTGTAAAAGCCGTTTTATGCGCGGGTTTGTATCCAAATGTTGCCAGTATACAGCATCATCCATCGTTTAAGAGGCCTCCTAAACTTCGAACACAGGAAGATGGCTTGGTGTATCTTCACCCCAAGTCAGTGAATGTTGACGTCAAAGTGTTTGAGGACAACTGGTTAATTTATCACGAAAAAATGAAGTCATCCTCGTTATTCCTGTACGACAGCACCATGATCGCTCCCTTTCCTTTGTTATTCTTTGGTGGTGATATTTCTGTGTTTATGGAAGAAGGCTATGAAACTGTGGCCGTCGACGACTTCATTAAGTTCAAATCTCCCACAAGAATCGCTAATTTGGTTAAGGAGCTGAGAGTTGAACTTGACAAACTGCTGAGACAAAAGATAGCCCAGCCCAAAATGAAGCTGAGCGCAGGTCCTGGGACTGGTGACAAGGAAAGTGCTCTTCTGCGTGCCATCATCGATCTGATTACCAGCGAGGAGAATACAAACTGGaaaaaacaaaagcaacttgCCAGTGACACACGGTTAAGACATTATTAAGAGCTACAGCTGTCTTGGAAACCTAGCGGTCACCATGGAAGATTCGGAGAGAGTCCTGTTGGCTTTTAGGATCAAATAATCGCTCATTACACTCGTTGGCTCAGCAGATGTGATAAGCCATCACAATCACGTTATTTGACGGGTCTTTTGCATCCCCCATCCTCGTTACCGGCGTCAACCAACGGACTTTCATTTTTGTGGTCAGTCATCGTTATACGCTAGCACCTTGTTTACATTCCGGCTCCAGTCGTCGTCAATGACCTCGCCTCGAATTCGAATGATTTTCAGTTGTTTCAAGCGGAATAAAAGAAGAAGGTTATTTGGATGCCTCCAAGAAGTCACAAAGCTCGTTTCAAATTCGTAATCCAGTTGGTAATGGCATGTCGTTAAGGATTCTCTGTGTCTTATTTGTTTCCCAGCTGTTGTTACTACGGACGAATGCTAAATCGATGTAACTAAAACGACTTGAAAGAAAACGGGGAACGGGCAAGTAAAAAAGGGGAACAAAACCCAACTTGAACTCCAGCCCTTTCAGTAACGTCATTGCcaattttctgttttgttcctatttttcatttttgtatttcCCCTTTTCCGTTCCCCGTTCGTTTGTAAAATCCTCGTTAAATCTTTATCTTTGAAACTTTGCAGTCGAACCCGCAAGAGATGAAAGCTATGAATTCGGACAATCACTACTTTAATACATTAGCATTAGGACATCCGTCGGAccaaaacagtttctttgaatttaGTATTATAGGAGAACGACCTTTCTCTAGAATAAAAACTTATTTATTTGCAAAGTCGTTTGGTCTTGTAGGAGCAGATAGTTATTACTTTTTCCTAGGAATAAAAACATTCTCTTATAAATCAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04408 all species →	HA2_N	Helicase associated domain (HA2), winged-helix	Domain	Interproscan
PF07717 all species →	OB_NTP_bind	Oligonucleotide/oligosaccharide-binding (OB)-fold	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF21010 all species →	HA2_C	Helicase associated domain (HA2), ratchet-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048333 all species →	Domain	Helicase associated domain (HA2), winged-helix domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011709 all species →	Domain	DEAD-box helicase, OB fold	Interproscan
IPR007502 all species →	Domain	Helicase-associated domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934 all species →	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002151 all species →	Molecular Function	G-quadruplex RNA binding	Interproscan
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003724 all species →	Molecular Function	RNA helicase activity	Interproscan
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0005622 all species →	Cellular Component	intracellular anatomical structure	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000020823.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.