Gene detail

Detailed information of ENSNQRP00000020836.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

ENSNQRT00000025739

ATGAGCGACTTAACACCTGATGAGATCAGGCGTCGTCGCCTGGCCAGATTGAACCAAGGTGCCTTGTCCACATCCCCGACATCAGATGGCCAAACCATTCCAATGAGAACTAGCCTGAAACCTGTGGATGCAGAAGATTCAGCAGTTAATACTCAAGACAGTGGCTATGGTTCTTTGCCACAATCCTTTGAGTTTGATGATAACTCCCAAGAGACAGGGGATAAATATGGCAAGCGTACTTCACCAACTAGTTTGTCTTCTCCTTCAGAAGGttttaaattcaagaaaacaAGGGATGGATTTGACAAACATGGTGCTAATCATGCAGGGGTACATGTATATGTAACCGATGAACAAATTGTAAAAAGCCTTTGTAACATATTTAAAGTTTCATTGAAGAATAATGAACTATCTCCAGAAACAGTTTACTTGCCTTCATTAGCAAAGGATCTTGCAAGAATGAATCTTACCTCAGAAACTGCTGTCAATCTTATAAGTGAACTGATCACGGAGAGACTAACACAATCACATGTTAGTAGTGAAGGCCAAACAAGTTTGAGTGCAACACTTACTATTGCTGAAGAGACTTCTCAAATGGCCATTGATGATGGATCATCAGAGAGCAGATCTTCAGAATGTAGCAGTTTGCTGACAGAAGAAAAAACTGATTTTCTTGCCTTAAGAGAGACACCATTCATGTGTCAAACAAAGCAACTCAAGTTTTTGGCTGACAGTTATAACCGCACAATGAATGaagaaaagaattttacaaAGCGATCCCAGGAAGAGAGATGGGTGACTGCCATAACCCAAGCTCGACGTCAAtgtgtttcattttcattatgtGTTCTTCAGGGATACTTCTCTCAACAGAGATCTGTGATAAAGAAATCTCCACTGGTGCATCTGCTTATCAGTGAAGAATGTGACATTCCCTGGTTGTTTTTGGTTGATCTTGTTGCTTTGGCTGCAAAGGACTCTGATACTCTAAAACAGGTGTTTGTACCAGTGTTGTTGGGTTTGAATCGTGAAATGCAAAAGCAGCATTTAGCAAGTGATGAATACAAGGCTCCATTACAAGCACTCTCTAGGTTGTGTGATATACGTCTTGGAACAGCTTCTGTTAGACCCATCTGCAATCTGATGGTGACTTTGCCTGATCTGTGGATGCCATCTCCATTATCAAGAGCTGAAGGGAAGGAGATTGAAAAACTCTCACTCCTTGGTCCTTTTCTTAGCCTGTCTGTGTTTTCTGAAGACTGTCCTCAGATTGTGGAGCGCTACTTTTCTGAGTGCTCTGACAGTGTAAAGCTCGTGAATGTGACTCTGAGGAGTGCCCTTCTTTTAGTTAGAACAGAAGTGTTCAAGATTATTCATAGCATGTTAGTGTCAATGGAGAGTCGTGATTCTTGTTTAACGTTCATGGGAGCAGTTTTACAAAGAAATCACCGCAAAGCACAAATGCAGGTTGATGATAGACAAGTTGCTTCTGATGGATTTATGCTGAATTTCATGACAGTCTTACAGCAGCTTTGTGGAAAggttaaaattgaaaaaGTAGACAGTCTGTATCTCCATCATCCTAAGTCAAGAGTAGATGTTACACAGGAAACAAGACTAAAACTTACATCACAACAAGTTGCAGATTGGAAACAAGAATTAGccaaaaaaaattcatggtTGGAGCCCAAATTTCCTACAGAATGTTTCTTTATGGCGATTGAAGCACATCATTTGGCTCTGTTGCCGGCATGTAGAAGACATTCACGCAGGCAGAGAGCTCACCGTGACTTAACACGCATGATTGAGCATCTAGAATCACATGAGAGTGAATGGATGGAAACGCCGATGGCCTCTCGAAATAAAAGCTTGTTGAAAAAATGGAGAGAACAAATCAAGaaaattgAGAATGGAAAGGCCTGTTCGGACGTTGTTCTCCAAGATGAAGAACTTTTGCGTGGTTGTTTAAAATTCTATTCATTTTTGGTTACTTGGATTTTAAAGCTCCTCAACCCGAgtaaaaatgaACTCAGACTTCCTCTTCCACAAAACATTGCAATGGAACTTGCATCGCTTCCTGATTACTATGTTAGTGATGTGGCAGAGTTTCTTCTATTTGTCAACATGCATGCCTTTTCAGTCCTTGAGGATCCTGTTATGAATGACATTGTTACTTTCCTTCTGGTGTTTGTGTGTTCACCAAACTACATATCCAATCCTTATCTTGTGGCAAAAATTGTTGAGGTTTTGTTTGTTATGAATCCCAATATTCAACCAGCTGCTTTGAAGATTCATGAGATGATCCTCTCTCATCCACTGGCCATGGATAACTTGGCTCCAGCGCTAATGAATTTTTACACAGATGTCGAAACAACCGGCAGCTCAAATGAGTTTTACGATAAATTCAGTATACGATATCACATCTCTATCATAATGAAAAGTTTATGGGACAATTTGACTCATAGGCAGGCAATTATGAAGCAAAGCAGGACGGATCAGTTCGTTCGTTTTGTGAACATGTTGATCAATGACACGACGTTCCTGTTGGATGAATCACTAGATTCACTGAAGAGTATCAATGAAACTCAACAGATGATGGCTAATGTGGCCGAGTGGGAAGGACAACCAAGAGAAGTGCGTACTTCTCGGCTGAGGCAGCTAGCAACAGATGAACGTCAGTGTCGCTCATACCTAACTCTTGCTACTGAAACTTTGGAAATGATGTTCTACCTTACGAGACATGTACAAGGACCTTTCCTCAGACCTGAACTGATCGATCGTATAGCAGCtatgttaaattttaaccttCAGCAACTTTGTGGACCAAAATGCAGAAATCTGAAGGTAAAAAATCCTGAAAAGTATGGATTTGAGCCTAAGAATCTGCTTGATAGACTGACACAACTTTATGTGAATCTTGATTCAGAAGAATTTGCGCAGGCTGTTGCCGGcgatcagCGATCTTACAAGAAAGAATTGTTTGACGACGCCGCAAAACATCTTCAAAAAACGTTACTGAAGACAGAGTCAGAAATTTGTCGTTTCAAGGCTTTTGCGGctaaagtggaaaaaaaagtggCAGAAAACGCTGCCTTAGAAGAGGATTATGACGATGCACCGGACGAGTTTAAAGACCCGTTGATGATGACTCTCATGCAAGAGCCTGTAATCCTACCAACCAGCGGAAAAATCATGGATCGTCCAGTTATTACACGGCACTTACTAAACTCAGACACTGATCCATTTAACAGACAACCACTTACCACTGATATGCTGAAACCAGCTACTGAACTCAAGATGCAAATAGAGAAATGGCTGAAATCAAGAAGAAGCAAGTCAAAGTGA

Transcript

ENSNQRT00000025739

ATCCCATGAGGCCTTATTACTTATCGCGCATGACGTGGCGCATAATCAAAGCCTATGATCGCGGGCTCcgggaaaagaaaaacttgcttCAAAAAGTTGTTGATTCTCTTTGTggaaaaatatactttatgtAACGATGGTGGAAAAACATAAAGATTTGCTAGAATGAGCGACTTAACACCTGATGAGATCAGGCGTCGTCGCCTGGCCAGATTGAACCAAGGTGCCTTGTCCACATCCCCGACATCAGATGGCCAAACCATTCCAATGAGAACTAGCCTGAAACCTGTGGATGCAGAAGATTCAGCAGTTAATACTCAAGACAGTGGCTATGGTTCTTTGCCACAATCCTTTGAGTTTGATGATAACTCCCAAGAGACAGGGGATAAATATGGCAAGCGTACTTCACCAACTAGTTTGTCTTCTCCTTCAGAAGGttttaaattcaagaaaacaAGGGATGGATTTGACAAACATGGTGCTAATCATGCAGGGGTACATGTATATGTAACCGATGAACAAATTGTAAAAAGCCTTTGTAACATATTTAAAGTTTCATTGAAGAATAATGAACTATCTCCAGAAACAGTTTACTTGCCTTCATTAGCAAAGGATCTTGCAAGAATGAATCTTACCTCAGAAACTGCTGTCAATCTTATAAGTGAACTGATCACGGAGAGACTAACACAATCACATGTTAGTAGTGAAGGCCAAACAAGTTTGAGTGCAACACTTACTATTGCTGAAGAGACTTCTCAAATGGCCATTGATGATGGATCATCAGAGAGCAGATCTTCAGAATGTAGCAGTTTGCTGACAGAAGAAAAAACTGATTTTCTTGCCTTAAGAGAGACACCATTCATGTGTCAAACAAAGCAACTCAAGTTTTTGGCTGACAGTTATAACCGCACAATGAATGaagaaaagaattttacaaAGCGATCCCAGGAAGAGAGATGGGTGACTGCCATAACCCAAGCTCGACGTCAAtgtgtttcattttcattatgtGTTCTTCAGGGATACTTCTCTCAACAGAGATCTGTGATAAAGAAATCTCCACTGGTGCATCTGCTTATCAGTGAAGAATGTGACATTCCCTGGTTGTTTTTGGTTGATCTTGTTGCTTTGGCTGCAAAGGACTCTGATACTCTAAAACAGGTGTTTGTACCAGTGTTGTTGGGTTTGAATCGTGAAATGCAAAAGCAGCATTTAGCAAGTGATGAATACAAGGCTCCATTACAAGCACTCTCTAGGTTGTGTGATATACGTCTTGGAACAGCTTCTGTTAGACCCATCTGCAATCTGATGGTGACTTTGCCTGATCTGTGGATGCCATCTCCATTATCAAGAGCTGAAGGGAAGGAGATTGAAAAACTCTCACTCCTTGGTCCTTTTCTTAGCCTGTCTGTGTTTTCTGAAGACTGTCCTCAGATTGTGGAGCGCTACTTTTCTGAGTGCTCTGACAGTGTAAAGCTCGTGAATGTGACTCTGAGGAGTGCCCTTCTTTTAGTTAGAACAGAAGTGTTCAAGATTATTCATAGCATGTTAGTGTCAATGGAGAGTCGTGATTCTTGTTTAACGTTCATGGGAGCAGTTTTACAAAGAAATCACCGCAAAGCACAAATGCAGGTTGATGATAGACAAGTTGCTTCTGATGGATTTATGCTGAATTTCATGACAGTCTTACAGCAGCTTTGTGGAAAggttaaaattgaaaaaGTAGACAGTCTGTATCTCCATCATCCTAAGTCAAGAGTAGATGTTACACAGGAAACAAGACTAAAACTTACATCACAACAAGTTGCAGATTGGAAACAAGAATTAGccaaaaaaaattcatggtTGGAGCCCAAATTTCCTACAGAATGTTTCTTTATGGCGATTGAAGCACATCATTTGGCTCTGTTGCCGGCATGTAGAAGACATTCACGCAGGCAGAGAGCTCACCGTGACTTAACACGCATGATTGAGCATCTAGAATCACATGAGAGTGAATGGATGGAAACGCCGATGGCCTCTCGAAATAAAAGCTTGTTGAAAAAATGGAGAGAACAAATCAAGaaaattgAGAATGGAAAGGCCTGTTCGGACGTTGTTCTCCAAGATGAAGAACTTTTGCGTGGTTGTTTAAAATTCTATTCATTTTTGGTTACTTGGATTTTAAAGCTCCTCAACCCGAgtaaaaatgaACTCAGACTTCCTCTTCCACAAAACATTGCAATGGAACTTGCATCGCTTCCTGATTACTATGTTAGTGATGTGGCAGAGTTTCTTCTATTTGTCAACATGCATGCCTTTTCAGTCCTTGAGGATCCTGTTATGAATGACATTGTTACTTTCCTTCTGGTGTTTGTGTGTTCACCAAACTACATATCCAATCCTTATCTTGTGGCAAAAATTGTTGAGGTTTTGTTTGTTATGAATCCCAATATTCAACCAGCTGCTTTGAAGATTCATGAGATGATCCTCTCTCATCCACTGGCCATGGATAACTTGGCTCCAGCGCTAATGAATTTTTACACAGATGTCGAAACAACCGGCAGCTCAAATGAGTTTTACGATAAATTCAGTATACGATATCACATCTCTATCATAATGAAAAGTTTATGGGACAATTTGACTCATAGGCAGGCAATTATGAAGCAAAGCAGGACGGATCAGTTCGTTCGTTTTGTGAACATGTTGATCAATGACACGACGTTCCTGTTGGATGAATCACTAGATTCACTGAAGAGTATCAATGAAACTCAACAGATGATGGCTAATGTGGCCGAGTGGGAAGGACAACCAAGAGAAGTGCGTACTTCTCGGCTGAGGCAGCTAGCAACAGATGAACGTCAGTGTCGCTCATACCTAACTCTTGCTACTGAAACTTTGGAAATGATGTTCTACCTTACGAGACATGTACAAGGACCTTTCCTCAGACCTGAACTGATCGATCGTATAGCAGCtatgttaaattttaaccttCAGCAACTTTGTGGACCAAAATGCAGAAATCTGAAGGTAAAAAATCCTGAAAAGTATGGATTTGAGCCTAAGAATCTGCTTGATAGACTGACACAACTTTATGTGAATCTTGATTCAGAAGAATTTGCGCAGGCTGTTGCCGGcgatcagCGATCTTACAAGAAAGAATTGTTTGACGACGCCGCAAAACATCTTCAAAAAACGTTACTGAAGACAGAGTCAGAAATTTGTCGTTTCAAGGCTTTTGCGGctaaagtggaaaaaaaagtggCAGAAAACGCTGCCTTAGAAGAGGATTATGACGATGCACCGGACGAGTTTAAAGACCCGTTGATGATGACTCTCATGCAAGAGCCTGTAATCCTACCAACCAGCGGAAAAATCATGGATCGTCCAGTTATTACACGGCACTTACTAAACTCAGACACTGATCCATTTAACAGACAACCACTTACCACTGATATGCTGAAACCAGCTACTGAACTCAAGATGCAAATAGAGAAATGGCTGAAATCAAGAAGAAGCAAGTCAAAGTGATTAAAATACAATTTTGGAATGAAGGAAACGTTAGAGCAAAACAGTGGAATTTATTAAAGGGCAGGTCCCCTGTTTTAGCCTTTGCTTACTtgcaataattatttcttttcttgaattcgcttttcatttttttttctcacgaacaGATGCCGTGTTTTGTTGTTGAGACAGCTTTAGTTATTGACTGATGGAGAAAATGTCTATGATTAGCCAGTCCTACAGACTGCTGTAAAAGGTTGTGACTCCAaccaaagtttttaaaaagtcaTTTTATTAGAGCTGCAAGGTATAATTGTagtttgaaaaaagaaactatttgaGGTACAATTTACCACAAACAAGACTAACTACCCTAAAAAGTACATTATTAAAGGTGActatgttttgtttctttaacttCGTAGTTGATTCAGTTGTTGACTAGTAAGTCTAGTAAAGCTGTTTAAACCACGAAGTAAAGTacaaaaagtaaaggaaaactTATTTCGACAGGGTGGTCCATTCAGCTCGGAGGCTGGTCTCCATAGGGTCCCTGAGTCTTAAAAAAACTACTTTACGTTAAGAATTTGTAATTAGTACATTTTAAAAAGCTCAGCGTAAAAATACAATGATAGCACTTAAAACCGCCTTTAAAAACCCTAAACAACAATACAAGACAAtacaaaaaattacattttaaaaaagCCTCAAATATTATTAGATTCAAAGAAAAGGAAGCTAATTACGATAAGAAAAAATTTCTTGCTCTGCGGCAGAAATTCTGTACGCTCTCGAGTTCAATAACAAATTTCGCGTCGCGAAAAAGAAGTTTGGTAAGGATAGTCTAATGTTCTGTCTCGTAGTATAGTAGGTATGAATGTTAGCAAATCAAggaaaatatgataaaaaattgcgtggaATAAATGAAGTAAGACATTCATAGAAAACTGTTAGCCTTG

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 activity RING\|U-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10408 all species →	Ufd2P_core	Ubiquitin elongating factor core	Family	Interproscan
PF04564 all species →	U-box	U-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045132 all species →	Family	Ubiquitin conjugation factor E4	Interproscan
IPR003613 all species →	Domain	U-box domain	Interproscan
IPR019474 all species →	Domain	Ubiquitin conjugation factor E4, core	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13931 all species →	UBIQUITINATION FACTOR E4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000151 all species →	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0034450 all species →	Molecular Function	ubiquitin-ubiquitin ligase activity	Interproscan
GO:0036503 all species →	Biological Process	ERAD pathway	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10597	UBE4B, UFD2; ubiquitin conjugation factor E4 B	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.