Gene detail

Detailed information of ENSNQRP00000021714.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000026804

CAAAGATAGAGATGGTAAAGAGTAAATGGGGTCTAGCATTTAGTGCTGTCATCTCAGTGATTGCTTCGTTGATAATGGCCTCAGGATTGTGTTCCTTCTTTGGACTTGTAACCACACTAGACAGCAGTGAGGTCTTTCCTTACCTTGTGATTGTTGTTGGTGTGGAAACATTCTGGTAATTACAAAGTCTGTGGTGTCCACACCAGTGGACCTTGAAGTCAAGATAAGAGTTGCTCAAGGAGTTTTGCCTTTTTGCTATGGTTTGTCTGTTGTCTGACTTCTTCCTTCAAATGGTGCTGTTTGTCACGGTTCTTTCTATTGACATAAGAAGAATGGAGCTTTCAGATCTTCAACGACTACAACACGTTTCAAGGCAAAGGAGTGGCTCGGCCGACTCACAAGGGACAGCTTCTAAGTTACTTCAAACTCCAACATCACCAGTTCCCAGTCCCCCTCATTCTCCTGAACCAGTTCAGTTCTTTGGCTTGTTACCACCTCTGCCATTATCGTCACTGACTGCTCAAAGCACGCCCTCAAGAGAGTGCCCTGTCTTGCCAAGGAAGCTACCCAAGAGGCTTAATATTGCTTATTTTTGGGCAAGAACAAGGATTGTTCAGAAGGCCTGTATGATCGGTTTTGTCATATATTTTATGTATATCCTGAGTTGTCCGAGCTCACAGTCAGGGGAAACGTCCAAACAATGGGCAAACTTGGAAACATCAGTTTCACATTCGACAATGGACAACTCAAGCTTTCAATATGGAGATAGCAAAATCAAGCTACCGCAAGAGGAGATAGAAATGAACGCGGAGCTTAAAGAAAAAGCAACGAGACGGAAAAGAGAGTTTCTCAAGAAACCCACGTCTGTTGAGTTTTGGAATGGTCTTTATCAAAGATATTGGCCTGACGTGCTGAATTACTACAATATCAGTCTCCTTGGCAGGTACGTGACTGTTTTGCCTCCAGTTCATCTTGGTGTTAACATTGATACAGACATATTTGTCAAGAACTCGTTCGAACAGAATGGTGAGCTCTTTACTGATGGCGATGAGTTTACGACTGTGTATGGAACTGTTAAACTTGAGGAGTCCCAAGCGAACGGGCAAGAGACGCCCGCTGGGGGCAAGGAGACACTGGACGCGAAGTATTATCACAATGCCTTGTCTTGCGTAGTACTTGGAGTGGTTGTAATGATAATTCTCTTCTTCGTTTGTAAATTTCTCAACGATCTTCAAGTTAACCCGAGGTCTGGAAGTGGCCGGAAGAGGACTGGGTATGGACGTCGTGCATTGGTGGAGAGTGTTCCCTTCAGTCTTAGGGGGCACACTCAGAGTGTAGAACATTTGAAGTGTACTGTATCGTCGATTATCAGTATCTGCTTAAGTGGACAAATATGTGTTTGGGATATAGCCACAGGATATCGCTTGACAGTTATTAATAGAAGAAGCTTTTTGAAGATCGAAAGCACACCAAAACGACGACACTCAAAACATAAGAAGTCAAAGCTCAAGCGTAGTGTAGATATGGACAGTGGTTGCACCTCTAAGGGATTTATAGCCCACTCACCCAGTCCCAGACCTCTTTCAGACTCAGAATGTACAACGCCTCAGTCCTGCAGCGTCGATGAAAATACACGAGAGGCAACAAATGACACTTTACTATCGCCTACTGAAGAACACGAGgTCTTAAATCGTGATTGCTCAAAGACTGCGGGTTTTGACTTCAGTAAATACGCAAATGGCGCGGGAATTCCTGCCTGGTCAACAAGAGTAAGCTCTAGAGGTTCATTTACAAGCTCCTGGTCAAGCGCGGACGGAGAGGACCCAGGGAGGTTAACAAGCTCGGAGGAGTCTGCTGATGAGCAGGTTTTTTCGCAGACTAGCAATGACTCTAAGAATGAATCTACCGGAACCTCTGTGTGGTGTGTTGATTGTAAAGGAGATTTGTTGGTGACAGGCTGTAGCGACGGTACTATTGAGATCTGGAGTGTGTCGTCAGGTGTCTTGGTGTATGTATCACATGAAAGTTCCATGGGCGTGACCaaacttaaatttttattcaacAGGCGGACGTGGACTGTTTACACTTCTGGAGCATTTATCATGTCATGAGGTTCAACACCGCCAAATGTAAAGTCTTACATATGACTAGGAAGAGATTCTGGCGAGGACCCCAACACAGCTTCCAGCTCTCTGGTCACAACTTGGCGTCTGTTTCTGAAGTCTCCGACCTTTGGGTGGATGTGACGGGGCAGCTGTCTTGGGCCACTCACATTGAGGAACTGTGCGCTAAGGGCAACAGAGTTCTCGGTCTAGTCAAGCGCGTATGCGGTCAAGATGTATCCAACGTTCCAACTAGAAAACTACTGTATATGTCGTTAGCTAGATCCACCTTAAAGTACTCATCTTGCCGTTGGTCTCCTTACTCAGTAAAGCATCACAGTTCGCTAGAAAATATTCAGCGCCGCGGAACTAAGTTCTTAATACATTATCCGCCCAGGGAAGTACATGTAGCTTACTTTACAGACTGGAACAACTTGATTTTCTTCCCTTAGAGATACGCAGAGATATACATGACTTAGTTTCCCTGTTTAAGTTCACGTATTCAGCTGTTACTGCAAAGTTCGATCGTTTCTCGATACACTACTCGAAATTGCGACGCTGCAAGTTTCCTTCTTCTGCCCTTTCATAACCAGGATTACTTTATTAAGTCGTACTTCACCTGGACTGTTAGGGCTTGGAATAGTCTTCCTCATTTTATGCATGCTACTTGTGCTCAACTGTTTAAAAGTTTTCTACATGCTCACTATAAGACCAGGCAAAGTTCCTATCGGCCGCGATAGTTGCACCTGTAGCACACTCTTTTTGCTCACACTCTTTCTTCCTTCATATACATCTTTTTTGTCCCATTGtacaacttttgcagttgcgaaaagaaagcttgaaaaaaaattgaagcttGTATTTTATTCGGCGAACCCTCGACGTTTGCGATTCCGGTGCAGCGCTcttaccaattgagctaacaagccaactgggagcaggtcgttgaattggttcgttGTAAACCCGCGAAAGACATTGTAGGGGTTGAAATTCAATTGGGGCTCT

Protein

Gene family

Family type	Membership / link
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12349 all species →	Sterol-sensing	Sterol-sensing domain of SREBP cleavage-activation	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR030225 all species →	Family	Sterol regulatory element-binding protein cleavage-activating protein	Interproscan
IPR000731 all species →	Domain	Sterol-sensing domain	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46378 all species →	STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0032933 all species →	Biological Process	SREBP signaling pathway	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan
GO:0032936 all species →	Cellular Component	SREBP-SCAP complex	Interproscan
GO:0045540 all species →	Biological Process	regulation of cholesterol biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000021714.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.