Gene detail

Detailed information of ENSNQRP00000021910.1 in Porites lobata

Genomic Location: Porites_lobata_contig_42:958650...1012445
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSNQRT00000027042

ATGGCGGCGACCAGCGCAAGCACCAAGACAAGACAGCGAAAACTTTCGTTTACGTCCACGATCCCGCTGTTAAACCGAACAAGATCAATGACTGACCAAACACTGCTTGGAGTATTAAATATACTTCGCATGGACGAAGGGCAAGGGCAGAGTTTTATGGTGAAGGCAATTCTCCCCGATGGAAAACCGAGATTGTTAAGTGCTGAACGTAACATGACAGTTAGGGAGCTTGTTGCTGGAATCTGCCAAGAATACAACTTAACTAATTATCAAGTTCGAACCTTGCCTGAAAAAACGTTGCTTAATCTTGAAGCAAATGCCACCACGGTAGAGAATGCAGAAATAGCCATAGAGGATGTGGACAAAAGGCTTTCAAACTTCCAGCTTGATAATCTCCACACAATTAAAGACGATAGACTTCGTTGTGTGAAAGAGCTGGTTTATGCTGAAGAAGTCTACAACGAATGCTTAAAAAGCCTGTTCGACTTGTATGCTGAACCATTAAGGAGCAAGATCAGCCGAGCAGAACATCACACACTGTTTGCCAATTTGGAGCCCATTTGTTCATTGAATGCTTCGCTTTATTCAAAGataGACGAAGCCGCAAGCAACTGGAATTCAGCATCTACAGGGATAGGTGCAATTTACGCagaatttccattgttttgggaGAGTTATAACGACTACTTCCTGGCTTACAAGTTTGCAAGAGCGTTAATGAGACAAAAACGCGACCATGATAGCGAGTTCATGTCCTTTGTTCATAGCCAGAGGGGATCTCACAGACCACAGTTGGATGCCTTGCTGCTCAAACCGGTTCAACATGTGGTCGAATGTGAACGTATTCTGTCTAATTTACTGGAAAGAACATCCGAGACTCATCGAGATTACAATGAACTGAGTAAAATGGTCGCAAAATTCAAGCAGGTTTTAAACTCAAAGTTAGAATCACGTAAGACGTACGTTCCTTTGCGTAAGGCCCAAACACCGTCATACGCGGTGTCCCTGAGTGTTGTGCCATCGCAAAGTCCAGTGGTTGTTCGCCGAGCCATCGAAACGCGAACAGATATAGACCAGTGTAAAATCTACGACATACAAGATAGATTTCCTAGTGACAATTTATGCCTGTCAGAGAAACAGAATTTACATCGTCACAAAGCAGCCTCAAGGCGACGCTCTGCTCCAACGACTGTAATTAAGGCGGCTTTGGCTGGAAAAACACACTCCACGAAAAGTTCTACTATAGATGCAGGGAGCATGCGCATGAAGACCCACTCAGAGACCACATCTCCATTGTCACCAGAACTCGTCCCATCCAGGAAATTTGTAAGAGAAGGGCCCGTTCAACTGTCATCAGTAAGTGGTCATTTGATCAGCAGTGTACTTCTCCTTACTGAGAACTGTAGAAGATCTACGTCGTCATTCAAGCTTAAACACCGTGTAAGAGTCAGCGAGATCTGGTTGGCAAGCTGTCTTGATGACGTCTGTGAAACTACTAAACCATCGGATAGATCATTTGTGGTCGGCTGGCCTACCACGAACTTCGTGGCCACGTTCaattcgtcagaagaaaaagaagcttGGCACAGCGCATTAACAAAACATATTAAAGAGCAAAAGGACGTAGAAGACCCTAAATCTGTTAACTTAAAAGTTTATAACAGAGATATGGATTCACCGGATTCATCTGGCTATTCGAAGTCTTTTACTGTGTCCAACATGGACGATGCTTCTACTGTTGTTAAGATGTCTCTGGCGCAGTTTCACGCACAGACTGAAGATGTTTCCGAATACCAGCTTTGGGTTCTTTCAGGGAAGGAGGACGGTGCTTATCCTCTCATAGGTCATGAGTTTCCCTTTGCGATAAAAATGAATCACATGAGGGAGGCAGCCCTGACAGATGAAGATGGGTTTCCGTTCGACTTTGATCAGCAGTTGCCCTCAATAGACCCATTGTCGCCAGAGACACAGTGCCAGTTTATATTGAAGAGAAACAGGAAAATTCCCAACAGAGTCATTATAGGTGAGACGGGGGGAGATACTCACACAGGCAACAAGAGTGCGGAGAGTTGGTTAGCCTGTGCACCAGCTACTTTTCCCGAGCGGCTTTTTTCGTACTTCCGGCTTTTCGGGATACCTCTGAGTCAGTTGTGTTCTGAGGATGAACCCGTACCCAAAGCTGTCCTGGAACTGTTGTTATACCTCTTCCGGTATGGACCCAATACTACCGGCATCTTCCGGAAGTCTGCTAATGCTAGGATTGCTAGGGAAATCAAGCTGGAGTTAGATGAAGGTAAAATCTGTGACTTTGAAGATGTTTCGGAAGTTGTAGCTGCCTCTGTATTTAAGgAATTCCTTCGTCGCTTACCTGACTGtatttttgaaagtgaaaattatGAAGATCTTGTCGCTACCACAAACCTAGAAGATCGTGAGGAAAGAGTGCGACAAATCAAAGGgattttggaaggaatCAACCGTTACAATTACGAACTGTTAAAAAGGTTTTTGTGCGTGTTGTATCACATCGCTGATAATGCGGAAACAAACAACATGAACGCTTATAACCTCGCTGTGTGCGTGGCTCCCAGTATGCTGTGGGCACCCAAAAGTTCCAATATTCCGACCACTGAACAATCAAACTCAGCTCCCCCGGTCATACAGTTTATTATTGAGCGTTGTGTTGATATTATGGGAGACAGTGTCAGGACAACCCTCGGTGACCGCACCGATTTCGCTGCTAATCACGTGGGTAGTGATTCTGAGGGTAGTACCCAGGACTCACGGACAGCTCTCAGTCAATCCTCTACCGATGATGGGATAGAATCACCTGAACCTCTAAGTCCCAAAGGAGAAAGGACTTCAATTCATTTAAGTGATTCGAACTTATATGTTTCGAGTACGCTGGCCGTGCATCCACCGAACAAGAGTATTAGCACTCCGAACTCTCCGTGTGATTCAGGGATTCCATCTCCAAGTTCATCGCCGCCGCTTAAGAGGCATGATGGCGAATTTTCTAATCAACTTAGAGCCACTTTTTATGAACCTAATCAAATCAAAGGACATTTGCCGCTCGGACGACGTAGTTCCGAACCGCTCGGGTTACCGCCGGATTCTTTGAAACTTCGACTGAAGGGTAATCGGAAGTTTCCGAACTCTAAACGACAGTTGAGTAGTACAACGACAAGTGCTGAACTTATAGAACACAAACAAGCTCCAAAGACTACAGCCAGTGGTCGCAAGTTAGAAACTGCGGTGCTGCGCCGAGCCCATTCTCCTCAAACAGTACGACTGTTTCCTGTAACGCAAAATGTCACGCAGTACCAACGTCTTAATCTGATACCAAGTTGTCCAGGCTCTGTGTCACGGGCTTTAGAAGTCAAGCACTCTGTTCAAACACAAAGTTTGAATACTGATAGTCATGAGGGTAACTCAAGTTCTCCTATTCCGCCTAGCTCCCCAGTCTCTAAACAGCCCCCAGGGGGTCCCCGATCTCCGTCTCCTAACCCTGATCAAGTCTTTCAAGCTGTAGATCGGCGAAGACAGCCGGCCGCGCCGTCTTATCAAGAGCATATGCAGCGTAGGAGAGAACTGAATCCAAAGCCCGCGTTTTTCCCGGGGTTAGACACAAAGGATGTGAAAGATGTGGACTCTAGCAGGGAACAAGGTTCTCCTAGGGAAAGTAAGGAATTTGTGGATTTTAAAGAGCAGGTACAACAGTATCGTGTTGCAGGAAGACCTGGATTTTTTCACGATCGGTTGGATTCTGAAAGAAGTGAGACTTCCTCGGGTCCTCGAACCCCTCTTTCCTCGTCAAGCCAGcatgaaaatgtgtttgaaCAAGTAGATGATTCTTCTGCGAGTTCTGTAGCGAATACGGGTGTCCGGAAACTCGAACATTCACCATTTGGACTGAACCTGCATCATAAGAGAAACATCAGCGAAGGATcttataaaaaacaaactacaGAAAATGCTAGGAAACCTATTTCATCAAGTGCAAGCTCTGGCCACCTTCGTTCCACCAGTAGTTCTGTTTCATCAAATGTTTCAAATTCCATACCTCATAACTCTTCTCTCACTCATTTTCCTCACTCGGAGATCTTCCCACACGAAGCTCAGACAAAAACGCATTGGGGTTCTTCGGTAGATACTCGAGGAACTTCGGCAGTTCCGAGCTCTAACTCGCCTGGCGCTTTCCGACTTCGGAGAGGCAGCGCAACTTCTTCGTCGTCGTCTGTGTCGAGTTTGGATGAACGATCCAGCATCGGCAACGACTCGACGTTTTCTGAAGGGAAAACGGACGTGACGCAGATTCGTGATATCAAGGAATTGCTCAGTGAAACTACTCAGGCGAACGGACTGAAAATCAGTCCTCAAACCGCACAGGCGATAGCTAAAGTACGCACTCCGTACCATACACAACCGAGCACACCGTACACGGTCCCCTCTCATGATGATATCGAAAAAATTCTGTCCACAGAAGAATCTTACGTCTAG

Transcript

ENSNQRT00000027042

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001712 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR047887 all species →	Domain	ARHGAP20, PH domain	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR047888 all species →	Domain	ARHGAP20, Ras-associating domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR003116 all species →	Domain	Raf-like Ras-binding	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23179 all species →	T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000021910.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.