Gene detail

Detailed information of ENSNQRP00000026447.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLOBA · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000032697

GGTGGACACAATTTGGTTCAATTCTTCAATTATCGTCTTTAGCATGgtgatttattctttttaaacgTCATGGAAAGTTGGCAGGAAAATGGAAAGTTTGCCAATAGTCTAGCGCAGTTGTGCTGTGAGCATTTCAAGAAATTAAGCAAAAAGGGGAAGCCTCAATCAAAAAACGAATGGACACTTCTGGCCGCCATTGTACAAGTGCAGCAACAAGATTTCAATGAATGCTCTATGGATGTGATTGCCATGGGGACTGGTTCCAAATGCATTGGGAGAAGCAAAATGAGTTATCAAgGAACGATTTTAAATGATAGCCATGCAGAGGTGATTGCTAGGAGAGGTTTTCTTagGTATCTTTATCAGCAGTTGCAATATGCATACAATTTACAGAAGAGTATTTTTGAATATCAAGAAGACAGCAACCTGTGCAAGTTAAAAGATGGAGTGTCATTTCACCTCTTTACTTCTCATACACCTTGTGGTGATGCATCTATATTTCCCAAAGGAGATGATGATGACACTTTGATAGTTAATCCACCAAAGAATCAAAAACTTGGAAATTCAAAGAAACATTGTCATGATGGTCATGAAACTATTGAACATCCAGCtataaagaaaatttgtttgcaAGAGGATGCAATTTATGACAGTTTATTGCAGGAGCCATTAGAAAGGACAGACAAGTTATGTATTGGGGCAACAACGGATGTGCAGAATGTTTCAAAAGAAGCTAATTTACTGACCAAGTTCTCAGATCATGCAAGACAATCAGACTGCATTCATGTAGAAAGTACCAACAAAAATGTCAATAGAAGTCAGCACAGAGAAAATGGAATAAAACTACTAGATACTACTGAGTCAAAGAATATTGGAAGgtttcttcaaaataatgaaaataagtGTGAAAACGATAGATTGTGCAATGATTTGTACAGAACTGGTGCAAAATGTGCACCAGGCGGAAAACAGGATCCCCTAAAACCTGGCCTTGGATACCACACTATTGGTGTTTTGCGTACTAAACCAGGTCGTGGTGATCCAACATTATCAATGTCATGCAGTGACAAAATAATGAAGTGGAACATTCTTGGTTGCCAAGGGGCTCTCTTGTCACATTTTATGATGTGTCCAATATACCTCTCATCAGTTGTGCTTGGCAGGTGCCCATGTGATGTGTTGGCTTTAAGGCGTGGCATCTACGAACGTGCCCTAACCATGGCATTGGATTTGCCAGCAAATTTCATTGTCAGCCAGCCCAACATTTGGCTTACTGATGTGTTATTTGAGCACAGCAAAGGAAAAGCATTGGAGACAAGCTTTGTGGAAGATAATAGTGAGCCTTTTACACAATCACCTTCAGCAACATCTGTTATTTGGATCAAAGATCCTTTATTGCATGAAGTTTCTGTTGCCGGCCTGAGACAGGGAGTTACCAAGAAGAACCTTTCTTCATCAAAAGCTAGGGTATGCATTAGCAAGGCAAGTTTATTTGAGACATTTAAAGTACTTGTCAGCCACATTCCATGTGAAAAGCTTCCGCCTACATTAAGGAAAAACCTTGTAACAAGTTACAAAGACACTAAGACAGGTGCAGTTGGCTACAACAATGCCAGACAGAAGTTCAATGCAGCCTTTCCTACATGGTGTCTAAAGCCTGAAGAACTCCTAACATTTGCTTGATAGAAAAGACTGAGTAGAGATTTTTAAATATCTGACTTAGAACAGTAAATTACAtcaaaaaagagcaaacaccatGTAACAgcattttcttcattttaagTCCTTACTTCATGGCAGATGAATATCCCTTTGTAAAGTTCAGAAATGAAGACATACAGTAGTCAGAAAAGTACATTTAGTTTCAAActgttaaatgtttgaatgacCTGTTTTCCAACTTGAgactaaaaaaacaaatgataCAAAATATGCAAGGATTGACTAGACTCATTTTCTACTCCAGCCTGGGTGTGTATAATTATGTATTTACACAAATCTGCAGTTTGTTCCAATACTATGGCTTTAAAATCCAAGCTTAGCACAGATATCATACTTTGAAATAATACCATGCAGACTTCATCCTTTTGTTATAATTTAACATACAGATTGGAGTTAGAAGGTGTCAGCCTTCTAACTCTAACCAATACTGTATGAGACCAAAGATAACAATGACCTAATTAACTATCATAGCTCACGATtgtgcaacttttttttcttaaaaccgcATAACACTTTACTAGGCCAACCTTATCTccccccacaaaaaaataaattcaggcAAAAAAACACAGTTGAGTAAAAGACAtgttaattttgaaaatctttCATCACATTCCAAAGGTGTTCTCTCCGCTGTAGGCAATGTACAAGAAGCCATCTTCATCTTTATGTTCCTCATAGATAGCACCCATCGTTGAGCTAAGAAATAAACAAAGCAGAATTAGGCCAAATATCAGTAGTGTATCATTTCTGAGGAAAATCCCAGTACATGATTACAAAGGTTAAGAATATGGTAAGAAAGCCTAAATACTGTAGAGTTCACATACTAGACCCCGTTCCCTGAAAGTAACCAATTTTTTAGTCACCCACACACCCCCTCTCTCTTCCCATCCAAAAGTAACATCAATTTTTGGACCTTTCTTTTCTTCTGCCCTAACTAACACAATGTGTACCACCAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02137 all species →	A_deamin	Adenosine-deaminase (editase) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002466 all species →	Domain	Adenosine deaminase/editase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46516 all species →	TRNA-SPECIFIC ADENOSINE DEAMINASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004000 all species →	Molecular Function	adenosine deaminase activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0008251 all species →	Molecular Function	tRNA-specific adenosine deaminase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15440	TAD1, ADAT1; tRNA-specific adenosine deaminase 1	EC:3.5.4.34	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.