Gene detail

Detailed information of ENSNQRP00000027840.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLOBA · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000034478

TCACACAAGGGACGTCTTTTGGGTGTCTTCGGCAAAATAAAATTCAACCATGTGACGCTGTCAAAAAACTCCTGGCTAAGGAAATATGTAGCCCTGTTATATACACACAAATTTTCTGCGCTTTAAAAAATAGATAAGCCAAAAAAACTATTTGTTATATTAGTAATTTCTCTTTCGCATCATGGCGGACGTCAGGTTGTGATTTTGTATTGATATTTTAATAATCTCTCGAAAGTGATGTCCAGTTTGCTTGATAACAGTAGTTCTCCTTCTGAAGTGGATAGCTTAGACTTAGATGAGGATCCAAGCCCAGAGTCCAATATTGTGTGTGAACTTATTGACGAAGCCATTGTAggtctttgttttgaaattcacCGCTCTATCAAAAATGGGGTTTACAGCATCCTTGagcaatcggatgaaaaaatGAAACAGTTTGAAGTTGTAGAATGTGAGGGCCTGGATGTGTTTGGTCAGACACCCTTAAAGAAACAGGTGGAGTGTGTGTGTCCCCATTGTCAAAGAAACTTGGCTGCCAATAGATTTGCACCTCATTTAGAAAAATGCATGGGAATGGGACGAAACAGCAGCCGATTAGCCAGCAGAAGGTTAGCAACCACGGGCAAGCTGATGGATGGGGAAGATGATTATGATAACTACTTTGATGATGACTGGACATGGAATTCAGACAGAAAACCAGGCAAGAAGAATAAGAAAGACAGGGGAAATTCTCCAAGGAGAGCTAAAGCTCCCAGAAGAAATGGTGAAGCTGGGACACCACGACCTGGAACACCAAGTTCTCTTCGTCCTGGAACACCAAGTTCTAATCGCCCCAGTACACCAAGTTCTGTTAACAGTGGGGAGCTGCCGGCAACAAGGACTGGTCCTACAGTGGCTGCCTTTGAAGCTCTTGGAAGTGcgGAGAAAAAAGCTCTTCTTTCACAGACATGCGGTGTGGTATCTGAGCATACAGCACGGATGTGTACAAGGTCTCATAGATGTCCTCAACACTCTGATGAGCAAAGACAAGCTGTTAGGATTTTGCTTTTAGGTTATCCAGATGTGGAGCCCCCTGTTGGAAGATTACGACTTGAAAGAGGTACTTTGGAAGCTGATGACGTAATCGATGTTGATAGTTATGAAGACGGTGATGGCCAGGCCTTAAGAGATACATTGAACAGGTTATCTTGGGAAGAAGAATCCAATGTATCAACAGGAGACGACAATTCGCCAGCGGGTAAatCGTTTGGAAGTTTGGCTCTgataaaacaaaagagaaagaagaagacaaaacacaaaaaacgacCAAGATGAGAAAAGGCACTATTGAAGGAATTCTGAGGCTGAAGAAAAGTACGGTGAAATTCGTCTGATAAGTGTGGAGACTGTCATTGTCTGTTTAAGAACGTCGAATATACACCTGAATGCTTACTCTCGTGTCTGAGGAAGGAAGGACTCTTGTGTCATAGAAGTGGAGGCTTTGTCGAATAACTTTCATTGGATACGCGGCGGTTTCAACTGCTAAAACCACGACATTGGCACGATAAACAGTTACGTCTCGTATCGCTATATTTCCTTTCTATTATTTCGTTCCTCTTCAAGTttaagtttgaaaatatttaatcTTTCACTGTAGGGAAGTCTGCGGTAGGTTTCACCTTGTGCCGACCTTGACAATGGTTCAGTCTAGTTACCTGGGTCTAGTTATTCTGTTTGTTCTGTGCAGTTGACTAATCTCCAATTACCTGTGGTATTGAGACGTTTTCGCCATCGTAAAAGGATCATAAAGGTGATAAAGACTGTTAATTTGACATTCAATGGTATAAGCAGAAAAAGCTGCATTACTTTTAACCTATGGGCATGATATTTCTTTGATGGCTAactcgatggattgttagaaAAGAACACACAATATGCAAATGAACTAGTAAACGTGATGAAACTTTGACGCATGGCACTGTTTTCGTTAATGTAATAGAACCCAGCAATGTTGGGTGCGCAATGTACGTCTCATAGGCGCCATAAACCGTTCAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08209 all species →	Sgf11	Sgf11 (transcriptional regulation protein)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013246 all species →	Family	SAGA complex, Sgf11 subunit	Interproscan
IPR051078 all species →	Family	SAGA-associated factor 11	Interproscan
IPR013243 all species →	Domain	SCA7 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46367 all species →	ATAXIN-7-LIKE PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016578 all species →	Biological Process	obsolete histone deubiquitination	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0071819 all species →	Cellular Component	DUBm complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11363	SGF11; SAGA-associated factor 11	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.