Gene detail

Detailed information of ENSNQRP00000028097.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000034781

TACAGCAGCATCCTTTGCAAATGGCGGAAAGTTGCACAGGAACATCGATCAAGCACAATGTCTCGAGGAGCATTAAGTTTTCGGCAGTTGAGCCAAAGAGAAGAGGTCCTTGATTGGGAGGATGAAGAAGATAGAAAACCACGTTACAATCCTTTCAGTGATGAAGGAAACTTTGATTTCATTGACCCTGGTTTCTCTTGGGTGAGCAAAGAAGAGGTTGCAGACTTCATGAAGCAGTCTCGTGGTCTTTCACTCAGTGATGCTggtgctgatgatgatgatgctgagcTTGGTGAGGCTTGGGGAGGGACACAGTTTAGTATCACTACAGGGAAGCCTCGCTCAGACTCAGGTGCCCAGTCGGCGCGAACGCGGCCTCAACCTTCATCTGCTTCCTCCAGTGTGAATGCAAATAAACTGAACACAGCCGTTGGAAggGCAAAAACTCAACCAAAAAGGCCTCCTCTGCCAAAGTCAGTATCACGGCCATCAGCAAACACGTCAACAACTTCAATGTCTGCATTGTCAACATCATCTTCCTCATCATCTTCCACCTCCCATGTGTCTGCAGCAGCTGTCAGAGAAAGGACTGCAAAATTACCAACCACGCAAGCCTCTCTACAAAGTGTTTCATCTTCAATAAGTGAAGTGATTAGCAATACACCGCAGGTATCAGTCACAGAATACCACAAACTTCAAGCTGAAATTCAACAGTTAAAGAGAGACCTGCAGGCTGCAAGGAAAGATAAAACAGCGGTGCCTACAGTACAAGAGACTGTGAAAAATATAATTCTTGGGCAGCCTTACACCCTTGAGGTGTATAAATCACTCCAAGACAAACTATCCCTCCTCGATTCAGCCATTAAAATGCATGATGGGAATGCCATCACTGCCGCTGTATTGTTCCTACGGAAAACTGTCAGACCAGCGATTCTTCGTGATGAGTTAAGAACGCGTCCCAAGGCTGTTGACCACTTAAGCAAATACCTCAAGGAACATTACGATTACACTGAACTAACAGAGCTGTATAGGTCTGTGGGTGAATACGAAAAGGCAGCGATGCTTCAATTCAATCAAGCCGTTAAATCAAAAGATCCTGGCGTAAGGTTAACCAAGCTTAAATATATTCTCagACATCATTTTGAAGGCTATCCGCAGCTAAGTGAACAAACAAATTATCTCAATGAATACATAGAGTTACTCGAGCAGCAATTACTCATCGAGGACGCAGATTCAAGAGCTGAAAGTGCGCGGAAAAATCAAGTGATGGTGGCGCATCCAAGACAGGCCTCATTGCCGTTATGCTCTTTAATCGTTACACTGTATTACTGTTGCCGTTATCACTTTGGAGAACCCGAGAACACCTTTACTAGTCCACTGGCTATTCGTAGCAAGTTTAAGCTATCCGACAAACAGTACGAGTGGACAGCGCTCTCTTCTCGAGCCAAACTCAAACAGTGGAGAGGCCTGGAGCAGATGTTCACAGTTAAGGGATTTTTTGGTTCAGTGAAAATGAAATCAGTCATCGGATTTAAGCAAGTTGTTGAGCTTCTTCATCAGCATGGAGCTCCTGAGGAGGTGTTGAACACTTATTTGAAATTAATAACCGATGCAAACGAGAGACTCTCCTTAGCGACAAAACTGAAATGCCACAATATGGCAATCCAGACGTTGGTTGCGATGAAGGACCGACAACAGCTTGATAAGTACAGGAGCAATCTGCGAGGAACAGCCCCAGAGCAGGCTAAAATCACCGAATATCTCAGCAACTCGCAATTGCGATGGAAGAACTAAACAGAAAACTGTCACGATTGAATGGAAGAATCAAAATATTGTATCCTGGACTAGAAtagatattttttatttctttaagaggATATACTGTACATATAAGATTTTTGTaggctttttaaaaaagtaatgtTTAAGTTCAATaaaagtcatttcaaaaatgcaatttaTGCGTGTGCGACTTGCGTCCAACGTGAGGCTAATTAGCAAAGAATCgctgcttttaaaaaaagagtgaTATCGCAGAGTATTGAGAACACTTTGGGTGAGGCGTTGCACGAATGAAGATATTGGGAAGGAGATGAATGTCATTTCCGATTGGTTATTACAGTATGTCAGGAAAAAGAAACGATTTTTTCCGTCATGTAACCAGGCAATATGCATCTCTTGGAAGGGAAGGATAGGGTGACCTACAGTCAAATGGAAACAGACCGTAAAGGAGCGGTTTTTTTGGCTCTATGGAGAGGGTAACAATGATGGCTCAAAACAGACCAGTGCATCAAGCTGCTGTGTGAGAAGCCACGGTCTAAAGAGAGAGTATGTACTACTACGACGACGATTATAACATCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04840 all species →	Vps16_C	Vps16, C-terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006925 all species →	Domain	Vps16, C-terminal	Interproscan
IPR040057 all species →	Family	Spermatogenesis-defective protein 39	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13364 all species →	DEFECTIVE SPERMATOGENESIS PROTEIN 39	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0007034 all species →	Biological Process	vacuolar transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23287	VIPAS39, VPS16B; VPS33B-interacting protein in polarity and apical restriction	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.