Gene detail

Detailed information of ENSNQRP00000028102.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000034787

taacggagcgaagctgcgccgcgccgatcttaAAATGGTCAGGCTACAAGAGATCTGGGAACGAGATTTTTGCAAGGAATCCCATAatgcatttcattttttttctatcacGTCTAGTTGTCGTTTTGGGAAACATGTCGCTTACAAGTCTTCTTCCGGCACCATTGCATGTGGCTTATCGCGACAAGAATGAAGACGATGACTTAGAAAAAGCATACAAAGAGTTAAAGGTTTCAGCTATTAAGAAACAGCCTCCGCCTTACGGACAAAGGCATGGATGGATACCAAGGAAGCTAGAGgattttggagatgGTGGTGCTTTTCCTGAAATACATGTTGCTCAATATCCTCTGGATATGGGGCGTGAAAAGAAGcCTTCCTCCAGCACTAATGCACTGCCTGTTCAACTGGATTCTCAAGGCAGAGTGAAATATGACGCACTTGTTAGACAAGGTCACCGCAAAGATAAGGTTGTGCATTCAAGATTTCAGGACTTGGTTCCTGTTCATTTAAAAGATGAAGGTGATCCAGAGCTGGAACGACCAAGTGAAGAGGACATTGAGGAGACAACTAGGAAAACAAGGGAAGCTTTAGAAAAGGAAGTCAATACAAAGATAGCAGCTGCACAGCCTACCCAAGTTGCACAGAAGCCTGGGGCAGCACAGTACATCCGCTACACACCTTCTCAACAGGGGGTATCATTTAACTCTGGAGCTAAACAGAGGGTGATACGCATGGTAGAAATGCAAAAGGATCCCATGGAACCACCTAGATTTAAGACAAACAAGAAGATTCCGCGAGGTCCCCCATCTCCCCCCGCACCAGTCATGCATTCGCCAAGTCGAAAGGTAACTGTGAAAGAACAGCAAGAGTGGAAAATCCCTCCCTGCATTTCCAACTGGAAAAATGCCAAGGGGTACACCATTCCTTTAGACAAACGCTTGGCAGCTGATGGACGTGGCCTCCAGGATCCACACATTAATGACAAGTTTGCAAAGCTAGCTGAAGCATTGTACATAGCGGACAGAAAGGCTCGTGAAGCGGTGGAGATGAGAGCTCAGCTGGAAAAGAAGTTAGCGCAAagagaaaaggagaagaaagaaCAGCGATTGGTGGAGTTGGCGCAGAAAGCTCGTGAGGAGCGAGCCGGTATTCGAGCTGCTGCTGACAGGCCAGaggaagagagagaaagagacaAACTACGTCATGAGCGACATAAGGAGAGAGAACGAGATAGAAGAATATCGAAAGCTGCTCCTGATAAAAGGTCTAAACTTCAGCGTGACAAGGAGCGTGACATTAGTGAACAGATTGCGTTAGGCCTAGCCTCAGCCCCTCCCTCTCAGGAAGCGTTGTATGATCAACGGTTATTCAATCAAAGCAAGGGTCTGGATTCTGGTTATGGAGGAGATGATGACGTATACAATGTGTATGACAAGGCCTGGAGACGAGAGGGTAGCACAGCAAACGCTATCTACCGGCCAAGTAAGAATGTCGACAGAGACGTGTACGGAGATGATTTGGAGAAGCTGGTTCAAACCAACAGGTTTCAACCTGACCAAGGGTTTGCTGGAACGGATCGTAGTCAGCGCCGTGATGGCCCAGTGCAGTTCGAGAAAGAAGAGGAAGATCCTTTCGGTCTTGATAAGTTTCTTACAGAAGCTAAAAAGGGCAAGAGACCTCTGGACGAACCTTCACGGTCAAGGGATCACGACAGTCGTAGCTCGAAGAGAAAGCGGTAAAAATAGTCGCCAGGAAAAAGCATCAAATTTTATGTTGAACAAGGAAGCCAGAAAACTTGTTGGATAATATTACGGTTCCTTTAATATACTAAACCTTTCCTTTCTACAAACATGGAAATGGCCCTTTATTTGGTGAATCGTTGTGGGAACAAGACTTTAGTGCTGCTTCCCTGTGGACACTATTGAAGAAGAAAAGCTAACGTAAGAGTTGATTAGGGTGCTAAAGAGCGCATAAGTAGAAGTCAATTCGGCAAGTCTCATTCTTGTTACTAAAAATAGAACTTAAAGAAAAGCGCCAAACTATAGCCTCCATTTGAAGCACGGGCCGGTTCAGACTCGCGAATTCTCATAACTAGTCTAAGATTGAATTTCTCCATATTTTAATTGTTTTCAGTAGAGCTGAAACTCTAGATCGCATTTTCCGGCCATATGGGATTCATATGTGCTCAGTTTGTCACTAAAATCGCTAATAATTACTCACTTACTGTCACAACGTCTCACGCCTCACCACGTCACCTGTGCACTTGTTACTTAGCAACAGTCAGTCAGTCTTCGAATGTTAACGGCAGACCTTATGAGACTTACTGAAGCAGAAGTTTTCAGAAGTTGTCCTAGTGTGAAGATCTCTGTAAATTTCTTGAGCATTGAATAAACAGTGAAACTTTGTATTCTTAATTTTGAAGCTTTAAATAGTATAAATAGTATAAATCAACTCTACTCTAACAGTGACTTTTTGACTTGAAAATAAAGCCAGGATAACTTCGGCATGGCCATGGGTTAGAAAGGTTTTGTACGCCTGGGCCAGGGCGGATAGAAAGCAGAGGATTTTGGTATGGATTTTAAGTTGTCAATCTAGAATATATAGGGTAGCAATTTTGTCGTGTACCTGGTCTGCTATAGGCTAAGGGTTGCAGGGTCCGTCTAAAATCTCTTATGATACCCCCGGCCGGTTAATTTAAAGGCCTGACAGCTTCATGGAGGGTTTGACTTGAAATCCGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02731 all species →	SKIP_SNW	SKIP/SNW domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017862 all species →	Family	SKI-interacting protein, SKIP	Interproscan
IPR004015 all species →	Domain	SKI-interacting protein SKIP, SNW domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12096 all species →	NUCLEAR PROTEIN SKIP-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06063	SNW1, SKIIP, SKIP; SNW domain-containing protein 1	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.