Gene detail

Detailed information of ENSNQRP00000028640.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000035490

AGCTCAATGGAAGACTATCAAGATATGCCTGTGACATCATTTGGTGCAGCCATGTTGCGAGGAATGGGATGGAAAAAAGGAGAAACCATTGGAGGAACCAACAAAGGCCTTGCAGAGCCAATAGAGTACATTCCAAGATCCAAGGGATTGGGTTTAGGAGCACAAAGGAGACCGCCTGCAGATGAAAATAGACTTGGAAAGAAACGAAAACCAGGCGACACAGCTTCAAGCAATATGTCAGGCCCTATCAAGGAAGGAAGTGGTCGGGTTAGACACTATAAAGGTGTAGGAGAGCAAGTCCAACAAGAAACATCATTGGATTATAGACCAGGAGTAGGAGTGATTATTGAAAAAGGACCTCACAAGAATATCTGTGGAAAAatagtGGCTGTAGACATAGATACATCAAGAATTACTGTTCAACTCCATCTTAGTAAAGAGAATGTTGCAATACATCAATGTAATGCAAGACTCTTAGATGACTTTGAATACAAGACACTTCTATCAAGAAAAGATAATGCAAAGAAGAAGGACAGTAGGACAGGAAAGGAACAAATACGACTGAAAACGGATGGTGAAAATCATACAAAAGAAGCGCACCATGAGGCAAGCAAATATCCCAAGAAGGATAAGGATAGCTCTATGAGCAAATCTGGGAACTCAAATGACCACCAtaggaaaaaagtcaaatgctgGTTATTTCCACAAACAAGGGTGAGGATCATCAGTAAGGATTATGAGAAAGGCAAATATTACaacaaaaagGTTCAAATAGTTGATGTGGTCAGCACAGAAAGGTGTGTGTGTCAAACTGATGAGGGAAGGTTTCTTGAAGACATACCACAATCAGCATTGGAGACAGTTGTACCCAAAACACTGGATTCCTATGTCAGAGTAGTCAAGGGTGATCACAAAGGACAGCTAGCAGTGTTACTTAAGAGAGACACATCCGAGTTCAGTGCTGTAATACAACTTACGCTGGATAAGAACGTTGTTACTGTGGACTATGATGACATATGTGAGCATATTGGGGATGCAAATGAATACTGAAGTTTCAGCTGTTGTCTTGTACCACTGACAGGAGCGAGACAACTGATCAAAGCATATGCAGACAAGATTGTCAAAGAAGATCCTGTCCTGTGTCTCTCTTAAACTTAAGCTATCAAATGTACTTTCTAGCCTGTGAGCAATTAAGCTGTCTGGTGTCAGAACTCCGGCGATGGGATGTGCAAACTTTGCAAACCCTATTCTGCTGGTCAGTTtcaatatcattattttattacgTGTAATGCTACAATCAAGTGGGACAATGACAGCTGAAAGTGAGAAGATGTATTAAAATTTAGCACCAGGATGTTGTCTGAAAGAAAACATTATGTAGAAAGAGAGTGACTGTCCTCAGAACCTCTTGAGGGTGGGGAGTCATGGAAAAGATCCCCTTCACTGGAGAGAAAAGGATGTTTCTAGATCTACTCATTAAGACTCTAAGTCTTTCCCATACCGGGATTATATGAAGATGAAGGGGTCAGTAATCCATCACCCATAACAAGATAGTGcatgaaaggaaaaaatctcCTGTATGTTACCCATGGGCACCATTGTTTTCCTTTTGAACGTAGAAACGCAGCTATTTTTACCCAACGTCACTTATTTTTAAATGTAGAATAATgaataatgataaataaactTGTTATTGCTctttgggggtgggggaggggaagTGCTTGTTTGTGTAGTACAAGTGGTATGACAGGCAAAGCTCCAGTAATATAAAGGGTCTACTACCAGCCATTTtgtttgccataaaatatcGAATATGCGAGCGTGTGGTTGTTAGCAGTCCCTTACTGAGACTGGAATGTGGACTGTTGTGCTTAAGTTAGACGTTCTAAAAGTCTTTTTTAGCTGGTTGCTCGGTCAAGATGGAAAACGCGATTTTTTCGCGTTTCTTGCTTGTTCACGCGGCTCAAAGAAGTAGACTTGGGGGCGTGTGTATGCCTCAGTCACATTCAGCCGCTGTGAAGCTTTGGATCAAGTTATTTATTTGGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12656 all species →	G-patch_2	G-patch domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR045166 all species →	Family	Pre-mRNA-splicing factor Spp2-like	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR041994 all species →	Domain	G-patch domain and KOW motifs-containing protein, KOW 2	Interproscan
IPR026822 all species →	Domain	Spp2/MOS2, G-patch domain	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR005824 all species →	Domain	KOW	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15818 all species →	G PATCH AND KOW-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000028640.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.