Gene detail

Detailed information of ENSNQRP00000028693.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000035566

CCGACGACCACAACTGTCCCAGTCGTCAAGATGTCGATGGAGGACTTTTTGTTTGGCAGCGATTTAGAGGATAGCGATGAGGAAGAGAAAGCCACAAAACCACCTAAAAAATCAGAGCGGGATGCTCAAATGAACGAGCTGTTCGGTGATTCACCCAGTGAAGGAGAAGAAGAGGTTGAAGGTGGCGGTGCGCGTGATTCTGAGTCCGACAAAGAAGAAGCGGAAAGCGGCGAAGagagagaagaaagaaaaaacgcggTTCAAGAAGGAGAGGATGATGATAACGAGAAAGATAATGATGATGTTGCAAAGCCGAAGCTTCAGACTCAGCTGTCATCCACTGACTTGTTTGGAGATGATGAGGAACTTTCATCAGATGAAGAACAGCATGAAGAGAAAGAAGATCAAACTGTGGTGCAAAATGAAGAGCTACCAGTCCGTGATGTTGATGAAACTCAAGCAATTGCAGATGCTGATGACATCACCAGGGAGGAAggggaagaagaagaggaggaggaaaCAAGAATTGATGTTACGATACCTTACTGCAGATTCTCACTTGGCTCCGAGCTCTATTTTGTCAAAATGCCCAACTTTTTGAGCATTGAGCGGAAACCATTTGACCCAGCTCTATATGAAGATGAAATGGAAGAAGATGAAGTGTTGGATGAGGAGGGAAGGGCTAGACTTAAGTTAAAGGTGGAAAACACAATTCGATGGAGATACCGAAAAGATGAAGATGGGAACGAGATAAAAGAAAGTAATGCAAGAATAGTGAGATGGTCTGATGGTTCCACATCACTGCTTCTTGGAGAGGTGTTTGAtgttcacaaaaacaaaattgatggCAATTTTAACCACCTATTTGTACAGCAGGGAACTGGTTTACAAGCTCAGTCGGTGTTCAAAGAGAAACTCACTTTTAGACCTCACTCCACGTCAAGTCAGACACACAGAAAAATGACGCTTTCCATTGCTGATCGTGCATCCAAAGCACAGAAGATTAAACTGCTCTCAGCAGCAGGAATGGACCCAGAAGCACAAAGAACTGAGCTAATAAAGAAAGAGGATGAAAGGCTGAGAACCCAATTGCGGCGTGAAAATCAGCAGCGTAGAATGAGGGAAAGAAGCCAAGCAAAGGGTCTTAGCGCTAGCTTCCTGGAGCCTGATCGATATGAAGATGAAGGAGAAGATTTAGAGCAGAGTCTGCTGGCAATAAAGaataaatacaagaaaaagTTGGCCAAAGgaTTTGGTAGTGAGTCAGATGAAGTTGAAAGTGAAGGTGCTGAAGGATTGGAGAGTGATGAAGAGGGAGAAGACAAAGAGAGACTATTGAATGCAAAGGAAGGCATGGAATCAGAAGATGACAAACTTGAAAGCAGAAAAAGAACAAATAGTGAAGATAAGGGTtcacagagaaaaaagaaaaagagtcgACAAATTGTTGAAAGTGATGAAGACAGTGATTAACAATGATGGCAGCTCTCATGGTAACATGTTTATGGAATGTGGCTCTCAGTTTGTAAATATACATTGAAGTGAAAAGAAATGACTGGATCAAGTGAATGCAAAGAACATGTTTTCTTGAAGTAGGGAGCAAGTGATAGGGCTTGGACTTAACCATGATAGTTCAGGAAACAGGAGGCTTTCATAAAAGCAAAATCTATATGAGTCTTGTAAAGATTTTGCTTCTTCACTTGTTGAAGCAATCAACGGacacaaaagtttaaaaaatgaactCAACAGTATTGTGTGTACGTGGCCTTTGCTATGGGGTCTACATTTACAGTTGCTATGGGCGTCATTGAGGCTTAAAGTAGCTGGTTTCTTAGGTTAAGTAGTAGGTCACATACTCCACAAATCCTCCAATATTTGTTATATTTGATTCATTTTCAAACTAATGAGCTGTCGGCTGATTTTACTGCAGTGGTTCATGGCTAGTAATGACAGCCCTGAGTTGTAAGAAAACAAGAGCAATCACGTGCACTATTAAGTTGCCTGGCTTTAATCTTCTGCAGTATTAAACAATCAACAAACAATGTAGGACTCCATATTCGTAGTgagcaagcaagaaattgtaCATAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04004 all species →	Leo1	Leo1-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007149 all species →	Family	Leo1-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23146 all species →	LEO1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593 all species →	Cellular Component	Cdc73/Paf1 complex	Interproscan
GO:0032968 all species →	Biological Process	positive regulation of transcription elongation by RNA polymerase II	Interproscan
GO:1990269 all species →	Molecular Function	RNA polymerase II C-terminal domain phosphoserine binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15177	LEO1; RNA polymerase-associated protein LEO1	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.