Gene detail

Detailed information of ENSNQRP00000050522.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLOBA · all data for this species · gene families

Sequence

CDS

ENSNQRT00000063492

TGCATAGTTTATATTAATTATCCCAAATATGTTTTATTCAtGAAAAATGTTAATTGTGCCTACCCAGTATTCTTTCTCTTCAGGAAATTTGTTGAGAAAGTGCAACACTGCACAATAACACTGGAAAAGAAAGATGCAGATGCTGTTCTGAGGCCAATTAATGCAGTTCTCAACTCAGGGGGTGGCATTGTGCGGATGAAAATTGATGACTTCTCAAGGTATAAACCAGGAGATCTAAACAAGAGAATTGATACATTTTGGCAAACGTTAGAGCAAAAACTGAATCCAATGATCCAGCCTTCAACGTATGATGATGTCTTTGATAGAAAACTTGAAGGAGACACAATTCTTCTTTTCATCAAAGCTATAGAGCATTTTTGTACAGTGGATTACAATTTGCATTTGCCCAATGATGCAGCATTTTTGCCACTCCAACTAAAATCTTTCTCATCAACGAATGGACTATTTCACCCCAATAATAAAAAGGCTCAAGACAAAATTGCAGAACAGATATCTTCCTTTGGAAATGGAAGTGGAGGGATGATTCTTATTGGCATTGACGATAAAACAGGAGAAATTCTTGGACAAAATATTGCAGCGGATGGCAAAGCAAAATGGGAGAGTGGGCTGATACTAGCATTTTATTTATCCTTGATTGTCTCTTTTTATGTACTAGTTGATTTTGGATGTCCATTGTCACCTAAAGGTTTTGAGTCAAACCTTCCAGAAACAGCCCAACAAGTAATACGGCAAATACAAGAGCAGAATTCGAGAGGACGTGAACGTGCACTTCTTGTAGCCTCCCCTTCAATGCTCTCTTCCGTCAAAAGAGACGAAAATCACACTAAAGATGATGGTGTTATATGTGACCTTCTCCTCTTCAATAAAGAGTTGGGTGGACTTCACCTTTTCACTCTCGTCAACAGTGGATCAAAAGATCAGTTCTTACCGTATTCCCATAATACAGGCAAATCTGTGAAGGAATCTTTAGTAATGAATGGCGGTTGCTATGAAAAATTTTACATTACCTGTCACGTAGTTCCTTGCGAGAGAGTAGGAACTGAGCCACTTGACAAACTGTCCCCAAACAATCGATATCCCAAGGAGTATAATCTGCAATCATCACGCGGGAAAATCTTCAAACTACTCCGGTCACTAGTAACCGTTTTGGCGCAATTTCCCAGTTTCCTTTCTAATAAGGAGGGTTTAACCTTTCTTAATTTGCTGACAAAGCAACAGTTTCAACTGTTGTATGAACAAATCGACGAACACAGAGAGCTATGGATTCATGGTGCAGCTGGCACAGGAAAAACGGTGGTGGCTGTAGAGTTTATTAGACAGCTTCTTCGTAGTGACTCCCACCTTAGACCTGGCAACATACTGTACGTTTGTGAGAACCTTGGAATACTTGAGAAAGTAAGGtatgtttctttcaaattccaGCGTGGAGGTTTGGATAACGTATTCGGCGATTTTGACTTTTCCTTCACCAAGCACGTAATCCTGGACGAGGTTCAGAATTTTAGAGATGAAGATGGAGATTGGTTAGGAAAAGCCAGACGGCTATTTGTGGAGTTTCTTGGACAGAAATCAAATCAATCACAGGTTCAAGACAGGCATACCACGTTTTTTCCCCAGTCGTTTCGTCTCACAAGGGTGATAAGAACCTCCACAGAGATCTTTGAATATGCCAAAAAACGTCTTAGTGAAGAAGCTGCGGGTCGCGTAGAAATAGGTCACGATTTCAACGGAGAAAAAGTAACGTTTTTAAGCTATCcagaaggaaaacaaattgaTTACTTGGTTGAAGTACTGACGGAGCTGTTAAGAGAAGGTTATAGCAAAGGCGAGATAGCTGTTTTGTTTGGAAAGCAACAGTCTCTCCAAGGAGATCATTATAGTGCACTGTCCAAGCATTTTGGTTTAATCGTGGATGCTGAAGGTAATGATCATGACAATATTGTTCTCAGTACCTTCAGAAAGTACAGTGGCTTGGACCGGCCTGTCGTTGTTGCCGTTGACATAATCGCCTCGCTTACTGAATATAGCTTGCCGAATGCGTCCCTCTATTGTGTTGCCACTCGTGCAATGGTTAAACTAGttttcctgaaagaaaaaaggggAGAAAAGCGGCGAAAAAACAAAGCAGGCAACCTTCCCGAAAATATTCGTAGGAGTCGGATAcgttaa

Transcript

ENSNQRT00000063492

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04326 all species →	SLFN_AlbA_2	Schlafen, AlbA_2	Domain	Interproscan
PF21026 all species →	SLFN_GTPase-like	Schlafen, GTPase-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000212 all species →	Family	DNA helicase, UvrD/REP type	Interproscan
IPR007421 all species →	Domain	Schlafen, AlbA_2 domain	Interproscan
IPR038461 all species →	Homologous_superfamily	Schlafen, AlbA_2 domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR048729 all species →	Domain	Schlafen, GTPase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11070 all species →	UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000725 all species →	Biological Process	recombinational repair	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24458	SLFN11; schlafen family member 11	EC:3.6.-.-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.