Gene detail

Detailed information of ENSNQRP00000052257.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLOBA · all data for this species · gene families

Sequence

CDS

ENSNQRT00000065705

ATGGCGGGTGTACCAAGTGATGTATACTCGCATATTTACTCatttttgcttcaaaataaGCTGGTAAAAACTGCTAAGTCGTTCAAGAAAGAAACAACTGTGGAAGTGCACCAACAGGATGACTGTGATATTGTTCAGTGGTATAATGCCTTCTTAAGCTCTAGACAAAGACTTGGTAAAAGGAAGTTGAATGATGGTAGCAAGGAACCACTAGCAAAACGGAGGAAGCAACAGTCATCAGATTCAGAGTCATCCAGCTCTGATGAATCAGAGGAAGAacagaaaacagtaaaaaacaaagtaaaaccaAAAGTGAATGGAGTACAACAGAAGAAAAAGGTTGATTCATCAGATGACAGCTCAAGTTCAGAGGATGAACAAATGTTACaaaaaggaaaggcaaaaaagtcTTCATCAGAGTCCAGGTCTGTCATAGAGGGACTTGAGaggaaaactgcaaaattaaaaacggtggaaaacgaaaaagaacaagATTCAGGTGATAGTTCGATGTCTGAGGACGAGGAAGCAAAAATATCAGTGCCTAATGGTGAGAAATCATCGTCTGATTCCAGCTCTGATGAGGAAAAACCCGCAAAGAGAGTGGTGGAAtcaaaaaatgagaaaaattcgAAGGATGAAAGTTCAAGCTCTGACGATGAGAAGAAAAAACCACCAAAATCTAAGGCGAAGAAAGTATCATCTGCGTCACGTTCTGATGAGGAGGAACCagcaaaaaatgttaaaaaatcaGAAACAGTTAAGAATCAAATAGCTGAATCATCTGATGAATGTTCAAGTTCAGATGATGAAGATAAGAAGATGAAGAAACCTAAAGCTCAAACTAAAAAGTCATCATCAGAATCAAGCTCTGAGGAAGAAGAGCAAAGAATAAAGGTCAAAAAACCAGAGGCAAATAAAGCTGAAAAAGCTAAATCATCTGATGAGAGTTCAAGCTCTGATGAAGAAAATGCTGATGAGGAGGAGACAAAGAAACCTAATGCTAAAACTAAAAAGTCATCATCAGATTCAAGCTCTGAGGAAGAGGAACAAACAAAGCAGGTCAAAACACCAGAgacaaataaaactaaaaaagctGAATCATCTGATGACAGTTCAAGttctgatgatgatgaaaatagTGATAAGAAGAAGAAACCTAAAGCTCAAACTAAAAAATCATCTGGATCAAGCTctgagaaaaaagaacaaacaaaaatggttaaaagatcaaagacaaataaaactaaaaatgaTGAATCATCTGATGATAGCTCAAGTTCTGAAGACGAggagaaaaaaatgccaatACCCCAACCTAAAAAATCATCATCAGAGTCAAGTTCTGAAGAGGAGGAACCacctaaaaatgttaaaaaatcagacacttcaaaaagtaaaaaacctGAATCATCTGAAGAAAGCTCCAGTTCTGAAGAAgatgagaaaaaaatgccaaaaccTCAACCCAAGAAATCTTCATCGGAATCAAGCTCTGAGGAAGAGGAGGAACCATCGAAGAAAGTTAAAGAGTCAAAAGTAAATAAAGCTCAAAAGGCTGAATCATCAACTGACAGTTCAGACTCTGAGGAAGATGATAACTCATCAAAACCTAACGCTAAaaagttttcttcaaaatcTTCATCTGATGAGGAATCAAGTGATGATGAGAATGAAAATGAATCAAAAtccaagaagaagaaaagaaaagggaaagtgaATTCATCTGATGTTTCCAAAATTACGACACTCCAAGCAACATCTACACCTGCCATAAATCAAAAGAATGGAAAAGTTAAGCAGGAAAAGACTCCATTTAAAAGAGTAAAAGAAGATGAGATTACAGTTGATCCAAGGCTACAAGACAACAGTTTTGAAGCTAAGaTGGGCTCGAGAGGAGACTGGGgagaaaaagcaaacaaagaccTTAAATTTGTTAAAGGCAAGTCATTTCGACACGaaaagacgaagaagaagagaGGTAGTTACAGAGGAGGACAAATAAACACTGGCGTTAACTCCATTAAGTTTGACAGTGACTAA

Transcript

ENSNQRT00000065705

ACCACGTGCTCTATGAGGGCAAGATGGCGGGTGTACCAAGTGATGTATACTCGCATATTTACTCatttttgcttcaaaataaGCTGGTAAAAACTGCTAAGTCGTTCAAGAAAGAAACAACTGTGGAAGTGCACCAACAGGATGACTGTGATATTGTTCAGTGGTATAATGCCTTCTTAAGCTCTAGACAAAGACTTGGTAAAAGGAAGTTGAATGATGGTAGCAAGGAACCACTAGCAAAACGGAGGAAGCAACAGTCATCAGATTCAGAGTCATCCAGCTCTGATGAATCAGAGGAAGAacagaaaacagtaaaaaacaaagtaaaaccaAAAGTGAATGGAGTACAACAGAAGAAAAAGGTTGATTCATCAGATGACAGCTCAAGTTCAGAGGATGAACAAATGTTACaaaaaggaaaggcaaaaaagtcTTCATCAGAGTCCAGGTCTGTCATAGAGGGACTTGAGaggaaaactgcaaaattaaaaacggtggaaaacgaaaaagaacaagATTCAGGTGATAGTTCGATGTCTGAGGACGAGGAAGCAAAAATATCAGTGCCTAATGGTGAGAAATCATCGTCTGATTCCAGCTCTGATGAGGAAAAACCCGCAAAGAGAGTGGTGGAAtcaaaaaatgagaaaaattcgAAGGATGAAAGTTCAAGCTCTGACGATGAGAAGAAAAAACCACCAAAATCTAAGGCGAAGAAAGTATCATCTGCGTCACGTTCTGATGAGGAGGAACCagcaaaaaatgttaaaaaatcaGAAACAGTTAAGAATCAAATAGCTGAATCATCTGATGAATGTTCAAGTTCAGATGATGAAGATAAGAAGATGAAGAAACCTAAAGCTCAAACTAAAAAGTCATCATCAGAATCAAGCTCTGAGGAAGAAGAGCAAAGAATAAAGGTCAAAAAACCAGAGGCAAATAAAGCTGAAAAAGCTAAATCATCTGATGAGAGTTCAAGCTCTGATGAAGAAAATGCTGATGAGGAGGAGACAAAGAAACCTAATGCTAAAACTAAAAAGTCATCATCAGATTCAAGCTCTGAGGAAGAGGAACAAACAAAGCAGGTCAAAACACCAGAgacaaataaaactaaaaaagctGAATCATCTGATGACAGTTCAAGttctgatgatgatgaaaatagTGATAAGAAGAAGAAACCTAAAGCTCAAACTAAAAAATCATCTGGATCAAGCTctgagaaaaaagaacaaacaaaaatggttaaaagatcaaagacaaataaaactaaaaatgaTGAATCATCTGATGATAGCTCAAGTTCTGAAGACGAggagaaaaaaatgccaatACCCCAACCTAAAAAATCATCATCAGAGTCAAGTTCTGAAGAGGAGGAACCacctaaaaatgttaaaaaatcagacacttcaaaaagtaaaaaacctGAATCATCTGAAGAAAGCTCCAGTTCTGAAGAAgatgagaaaaaaatgccaaaaccTCAACCCAAGAAATCTTCATCGGAATCAAGCTCTGAGGAAGAGGAGGAACCATCGAAGAAAGTTAAAGAGTCAAAAGTAAATAAAGCTCAAAAGGCTGAATCATCAACTGACAGTTCAGACTCTGAGGAAGATGATAACTCATCAAAACCTAACGCTAAaaagttttcttcaaaatcTTCATCTGATGAGGAATCAAGTGATGATGAGAATGAAAATGAATCAAAAtccaagaagaagaaaagaaaagggaaagtgaATTCATCTGATGTTTCCAAAATTACGACACTCCAAGCAACATCTACACCTGCCATAAATCAAAAGAATGGAAAAGTTAAGCAGGAAAAGACTCCATTTAAAAGAGTAAAAGAAGATGAGATTACAGTTGATCCAAGGCTACAAGACAACAGTTTTGAAGCTAAGaTGGGCTCGAGAGGAGACTGGGgagaaaaagcaaacaaagaccTTAAATTTGTTAAAGGCAAGTCATTTCGACACGaaaagacgaagaagaagagaGGTAGTTACAGAGGAGGACAAATAAACACTGGCGTTAACTCCATTAAGTTTGACAGTGACTAAATGAGCTTCATAAACTTTCTCAAAGATATGTTGTAgtttgtttgcttattttgtGCTTAAAGAAATGAAAGTCAATTTATTCACATGTCATGCTGTTAGTAGGACAATGTGGTGTCTGTAACATCAGTGAGTAGCTATAGGATCTATAACTATCTTCTATAATGTgtcgttgtttgtttgtttgttttgtgctTGAAGAGATGAAAGCATACTGTTTATTTTAACGCTAGTTTGTACAACAATTTGGCGAagtcagggctcgaaattaacgctcgcaaactcgcaaaatgcgagtgattttgataatctgcgagtaagaaaaatatccactagCAAACGATTGCGAGTTAGAATTATCCATgtctcccaaacaaagggaaatgaA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08513 all species →	LisH	LisH	Domain	Interproscan
PF05022 all species →	SRP40_C	SRP40, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR007718 all species →	Domain	Srp40, C-terminal	Interproscan
IPR039191 all species →	Family	Nopp140-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23216 all species →	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25818	NOLC1; nucleolar and coiled-body phosphoprotein 1	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.