Gene detail

Detailed information of ENSNQRP00000055290.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

ENSNQRT00000069728

GCCACAACTGGCTTTTCAGGCTTGTCAACAAGCACAGGATCAGGTGGTTTGTTTGGTAATACATCAACAGCATTTGGTGCAACATCTGCTTTTGGTCAGAAACCTACGACTGGGTTTGGAGCAACTGGAAGCCTGTTTAGTGGTTCTGGAACAGCATCCCTGTTTGgtcaacaacagcagcagcaaacAACAGGCTCACTTTTTGGTCAGAAGACAGGAGGGTTGTTCGGTACACCAACATCAAGCACAGCATCCACAGGTTTTGGAACTGGCTTTGGCGCTGGAGGAACCACGGGTCTCTTTGGACAGAGTTCTACTGGACAAACAcaaaatccactaaccCCGAGCTATCCGACACTGCTTTCTTTGCAAGCTGTGTTaattgatattaattttttttttcaatttcatcttCGCTTCCTAGCAACACTGGGCACAGGTACAACCGGTGGATTGTTTGGTGCACAGAATAAACCCCAGACAGGATTTAACTTTGGCGCTAGCACTACTGGCCTTGGAACAAGTGCATTTGGTGCCCCAACCGGAACAGCTGGGAGCCTGTTTAGTGCTAAACCCACGGCGTTTGGTACTGGAACAGCCTTTGGTGCCAATGCTGGTACAGGAGTGTTTGGTGCCACAGGAACCCTTGGAACAGGACTGGGCACAGGTACCCTAGGAACTGGTAACAACCAAAATACAACCCTGAGCactatacaacaacaacaacaacagcaactgcagcagcagcagcagcagttaCTCCTGCAGAACCAGCTTCAAATCCTGGCCAACTCCCCATTTGGAGACTCGCCACTATTCAGGAATTCATTAGCGGTTTCTCCTCGTCCATCAGCAAGAATTAAACCAAGACCAATCAATAACTACACTATGAATaagTCTAAGCTGTTTGAAGGGCTGGAGGAAGACTCCGGCTTGAGTCCAGATACATTTGTACCCAGAAAAAATATCAAGAAGCTTGTCATTAAAAGCAAGTCTACCACAGAGGATTCACCAATGTCAATAGTTGACACAACTCGAGTCAAGTTTCATTCCTTGGGGGAAGGTGATGATCTGCCAATAACCAGCTCCCCCTTTCCGCCCTCCCCTCCCTCATCACAAACTACTTCACCTGTTAGGAACACCCTTGCTGTAGAAGAAGGAGCTGCTAAGGCTGTCGATGACAGAATTAATACCAGTGATGGTGCCAGTCCGATGGGAGTAAGGTTTTCCAAAGGAGCAACAAGAGAAACATTAGATACCACTATTGCCGACTTGAATGTCCGCCATGTTACAAGGCAAGATGATGACCAGGAAAGTGTAAAGAGTTCTGAGGTTACAGAGGAAGATCTTTCTGAGAGTGGAACTAGAGAACCCTGTGGCATAACTTTGAAAAGGTCTGAGTACTATACAGTACCACCACTAGCTGAACTGAACAAGAGGATTGACAACAATGGAGATGTTTTTGTTGACGATTTTGTTGTTGGTCGCGAAGGTTATGGCAAAGTTAAGTTTTATGGCAGGACTAATGTTGCTGGACTGAACTTGGATGAAATTGTGTTCTTCAGGCGCCGTGAAATAGAAGTGTATCCAGACTCGTATCCTAACAAACCTCCAGTGGGTGAGAAGCTTAACAAAAAAGCAGAAATTACTCTGGAAAAAGTTTGGCCAAATGACAAGACATCACACAAACCAATCACAaGCCCAGAGAGACTGAAGCTTCAAGGATGGCAAGAGAGAGTGGAAGCTGCCACTGCAAAGCTTGGAGCAACTTTCCTTGATTATGATCCTGATTATGGAAACTGGGTTTTTACGGTGGAACACTTTACTCGTTATGGAATGCATGAGTACCTTGATGATGAACAGCTGGCAAAAAAGCTCAAGCGGCCTCCTCTTAAACCACATCTGCAGGATACAGATGACTctttggaaaaagagaaacttgaaattttcaAACGTCTTAAAGAGAAGAAACAACAACTTGAAGCTTATGAGAAGGAAAGGCAAAGGGCTTCTCTGTCATTACATGACCAGGATAGCGACATGCCAGATATTGATAATGAAACTTTCCCAGAGGAAATGCTTGACGACGAAGCTAGAGAAGGAAGTGATGCCAGCGACGAAGAACTTGAAAGCTCACCTGCCAGTCATCAGTTAGCCACAGCATTGGGCATGAATGCGCAGCGAATCCAGGTTATGAAGGCGTCATTCTTTGCTGACCAGTCTCAGCCATCTTCAGGACACTTACCCAGTGATAGGCCTTCTGTTGACAAGTCCCTGTTGAGTGCATCTTTTAGCAAACCAGGACACACCAAGAGTTCTGTGTACCCTGCTGTTATGCCCCTTGGGCCTCTTCTCTCTCCTAAGGTCCAGCGCCGTGTAGATGAGTCAGTTGGACCAGAGCAGATGCCGCAGTCTTTGTTTGGCAGCCCTAAGATAGGTGTGTATCCGCTGAGACATCCAGTGGTGCATGACCTAACACCAGCGGCCCCTCCCTCGCCAATGCTGCTCCCTACTGCCATTGGCACGGCAATGGATATCGGAATTAAAGTAGTTGGAGCGCGCAGCCAGTTTGGCTTGGTACCTAAAGAGGACTCCCTTGTCAATACCAGAGAGAAACTTGTGGGTGATGCTGGTCTGATGATGGGGCGGTCCTTTCGTGTTGGTTGGGGACCAGGGTTTGTCTTGGTACACAGTGGTACCCCGCTAGGAAAACGAGAGAAGCAGTCCATGGCTCCCATCACCCAGCCCTCCCTGGTGGGGAACTTTTTGGCTCCGAAGCCAAGGCCTAGCAACAGTGATGGAACACCTGCGTTTGGTGTGACACTGGAAAAGCTCAACGTTGCGTCACACTTCAGTCATGGAAGTGATACAGTGCTGGCACAACACCAGTCTGTTCTTGAAGCAGAGCTTCATCATGCCCAGGTGTCTGTCGATAATGGCTGTCCATTCATTCATCCTTCGACTGATGTCAAAGCTCTTCATCACCATGCAGAAATTGCGAGGAAAAACAAAGACGCAACAGTGTCAGGCCCACTAAAAGAGGCAGCAGAACAGATCTGTTTGGTTTGGGATTTAGTTGTTGCTCTATGGGGCAAACTGAATGATGAGcaagaagaagatgatgaagttacaaaCGGAATGAGGGATGAGAGGGAATCCTATCAGAATCGTATGGCAAGGAAAGAAGCTTTGTCAAGGTGGCTCGCTGAGGCTGCAAAGACAAGAATCTCTAAAGAGGTCGATGAAGCTAATTTTCAAGAAAGCGACCACTTGAAGTCTATCTTCAGTTATTTAACTGGAAAGCAGATTAGTAGGGCCTGTAATACGGCACAACAACATGGCGATTATCGACTTTCACTTCTGTTGTCACAAGTTACAGGAAACTCGGCGACACGAAACCTCATCTACAAACAGCTGAGCGATTGGCAGGAAATAAAGGCAGACATGTTTATTGACGAAGAGAGAATAAAAATTTACGCTTTGCTCGCTGGCGCAATGGTATGGCCCTTGACAAGTGACACAGTTAACGTTTGCGAAGGTCTGGATTGGAAAAGAGTACTTGCTGTTCATTTGTGgTATTGCTGTTCACCGACATCTTCAATACAAGATGCATTGAATGCGTATGAAGCTTCTTTCAAGGGAAGTTCCAGCTATGGGAAATATGGTGCCCCTCCTCGGCCACCCTTTATGGAAGAAAACGACGAAGACGAAGATGAAGAAAACAAGTTCGTGACGCGAGATACGTGTTACCATCTGTTAAAACTTTACTGCAAACGATCGCACAGACTTGAGCGACTTCTTTCACCATCAACCTCTACTTCTCATCAACTTGACTTCAGCTTGAGTTGGCATCTGTATCAGGTCTTACAGTCTCTCGAGTACACGCATCTCTCCGAGTACCACTCGGGCATGTTACACAGTGGTTTTGCCGCTCAGTTGGAGGGAATGGGTTTGTGGCACTGGGCTGCTTTTGTGTTGTTACATATACAAGACTTTGACAAGCGAGAGAACGCTGTCCGTAGTCTTTTATGTCGCCACTGTTGCTTGTCAGCGGATCACCAAAATGTCGAGAAAGAGCGCTTTATGTTAGATGACTTAAAAATCCCTGCTGAATGGATACACGAGGCTAAGGCGTTGCGTTCGCGCTACGAGGGTCGAACTCGCGAGGAAGCTTTTCATCTGGTTAAGGCGCGTCATTGGAGTCTGGGGCATAACGTTGTATTGCGCAGCCTCGTCAGTGATGCGATCATCAACgGGGAGTATGACATTTTGAAGACCTTGCTTGGAGAAATGGAACCGAGAGATCGTAGCTCCACCGTGAGGGACTGGGCGACAGGAGGACAGGTTTGTCATAAGTCCATTGTTATCCCTGTAGGCAAAGTTGTACCAACGAAGTATGATCTGGAAGATATTCATGCTGAGGTCTCCTCCCTCTGCACCAGAATCAACATTTTACCTTCCAACACAAGCAGAGACTTGTTATGCCAATACGATATGGCTAAAATGTGCGCAAATTTTATGAAGATCGTCATGAAAGAGCTGGTAAGCGTGTTTTACAGTTTAAGAACAAACTTCTCTTGTAAAGGAAACTTTTCCTGCAAGAATCTTGTTCTCAACCCAGCAAAATTTGTAGACATAACGGGGGCGAAATGTGATCGAATATCAACAGTCTCACCGCGCTGGAGAGAGAACATGCACAGTTCAAGTTTAACTTGTAATTCCTGGAGTCTAATTACTAATGTAAACCCTTTGATACTAAGCAATATGCAAGAGCTACCCAGCTGTCCCGCTGAGCTGAATGGAGGATTTCAAATTATGCAACTCTACAACGGAAAAACAGATGAAATGTGCTTTTtcaacaatgacaatgatacAGCCATATTCGAGTCGGACTGCTTAGGAATGGAGGGTCTTATTGTACAACTACCACTACAAAGAAACTGCTCCTTGAGGAGTAAGAAATCAGAAATTGGGCTGGACCGGCTTCGCTTTCTTTGCTACAGTGCTCCGTGGAAGGATAAtcaatttacatattttatagTCAAAGGACAAAATGTTGGAAGAAAAGTATCCCATGACAGCAAAGCGTCAGTCTTTCTTTGTGCTAGGTTTCAGAGAGCCGAtgcaaagggaaaaaatagaGAGATTCAAGTGGAATGTTTTGACCAACCAACATGTTGGCGAAATTTGTCAGCCGCGTCAATTTTCCTAAGAATACAAATCAGGAAAAGGATGACTTTTGACCAACCAGCGAGGGATCCATCTGAGGTGAATAAAACGCAATGCACCTTCCCAAAAAACCTTCAAGGAATTTGGAGAGAAAAATCTCAACAGAATAAGCTGCAGATGATGGTTATAAACGAGACCATGGTTGATATTTCTCCTTATGGCAGGTTCCACTGCAAGGATCGGTATTTCTTCCAGCACCAGGCTCCGTACAAATGCAGTTCAGTAGTGACCGAGAAGTGGCCTGccctttgccgtagtgccaaccctgcattcagttttgttttaaagattATATGGTCTCACCGAAATATATCTATTCTTTGTAAATACAATATATGCTATATTTTGCTTATGTAA

Transcript

ENSNQRT00000069728

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04096 all species →	Nucleoporin2	Nucleoporin autopeptidase	Family	Interproscan
PF12110 all species →	Nup96	Nuclear protein 96	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007230 all species →	Domain	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Interproscan
IPR021967 all species →	Domain	Nuclear pore complex protein NUP96, C-terminal domain	Interproscan
IPR037665 all species →	Family	Nucleoporin peptidase S59-like	Interproscan
IPR036903 all species →	Homologous_superfamily	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23198 all species →	NUCLEOPORIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0006913 all species →	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0017056 all species →	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0000973 all species →	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0006405 all species →	Biological Process	RNA export from nucleus	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0008139 all species →	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0034398 all species →	Biological Process	telomere tethering at nuclear periphery	Interproscan
GO:0044614 all species →	Cellular Component	nuclear pore cytoplasmic filaments	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000055290.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.