Gene detail

Detailed information of ENSNQRP00000062009.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

ENSNQRT00000079531

atgccaattttgtgggtttttgaaactgtTAAGTTTCGTATATgggttacaagggttaagAAGTTagggttacagggagttagaGAAGaaatgtactctgaaaaaagcgtgatgtacgtgcatagttgttgtttttcaacaCAGGCCGACTGCTTGTTTGCCGTTTTCGTTACTTTTAAGTTACCAATTTTTgcgatccagaaattttgccacCATGATAACCTCCTGGTCTTTAGAACAGCCATCCTTGAAGCGGTTAAAACGCTTTTGGAAGCGAGGGAAAAGCATCCGAAAGAAATCTCCATGCGCCATCAAGAAGTGTTTGGCCGTGCTTTCAAGCTATTCCAGTATGATGTGTCGAGTGCCCCAGTGTCTGTTCATTTACCAGTGTCAAGATTTCTTGCAGGTCTTCTGATATCCTGTGACAAGTATGATCTAACCTTCTGGGGACTTCTTGGATTTGAAACTGACGATGACAGACTGAAGTTATTTCTAATGGAGTACCCGCTGCGTACTCTTGCCATGGTTGCTCAAGTTCAAGCTGGGATGTGGAGAAGGAATGGTTATGCGGTCATGAATCAGGTGTATCACTATTTCAATGTCAAATGTCGGTCCGTCATGTTTGACAAGGACGTTATAATGCTTCAGGTTGTGGCATCTTTTCTTGATAGTGATTACTTCCTGGTAGCCCTTCTTGACAGGTTTGGACTTGAGAAACTTAACCAGAAGTTGACCATCGCAGaatcctttttttctctgctcATAGCCATTGTAGGTGAACGGTATTTCCCTGGTGTTGGGCGCGTGTCAGCGGATGAATTTATGAGAAGGGAGATCATTCACAAGCTATGTCTCAAACCCATGACGCATAGCGAGCTCGTCAAGGCTTTGCCGCTAGACAATGAACTAGAGGACGAGGAAGGAGTGGATGGCATCATTGAATCTGTTTCGACGTTCAAGAAACCTGGAGTTACAGGTAAAGGCCTGTACGATCTGAAACCAGAGTGCCTCAAAGAGTACAACCCATTTTTCTATCACTACACGCGGATAGAGCAGTCCAAGGTGAAACATTTGTACTTGTTGCCGTTAGTTGGTCCCCCACCTATCCCCCCTGAGTTCTGTGAGCCTTTCAGTAAGGTGTTGAAGCTGATGTGCTGTAAGACGCTAGTGGGTCTGATGAATACCCTTGTCAGTCGTGTCAACAAACCACACCCAAGGGCTGTTACGGATTTACTGTTTCAACAGGTTCTTCATTTGGTATGCCTTGCTCTTCatgaagaaaaacgaaaaaatatgACTGGAAATAATAGTGAATTTAACTTCATTACCATGGCAACCTCGACGGAAGGTAATGGgaatattttttcaaattattattgttcacaagttttCACTGATCTTGAAACTCGCCTAATATGGACGTTTCACAAAGAGCTCGCTGCACGAGACATAACGCCACGAGGGGTAGGTGCTGCGCGCCCCTCCCTGGCGAGGAGTGTTTCACAGGAGGAGGAAAAAGCAAGAAGGGCGAAGCTTGCACAAGAGAGACGCGCTAAAGTCATGGCTCAGATGTCTGCTTTACAGAAAGTGTTTATCAAGGAAAATGCCCAGTTACTGGCGTCAATGGAGGCAGAAGATTTCAACACTTCTGAGCCACACGTGGAAACCAGTGAACCCAGCCTAGAAGAGCCAGTTGTGCTAGGTGTTCAGCGGTGTCGGCAAGATGTACGCGCACCTCGCTATGTGACCGAACCTTGTATTCTGTGTCAAGAACAACAAGAGGTCAACAGCGATGGTCGCGCCGTAGTCATGGCTTCTTTTGTCCAGCGGTCGACTGTTATGTCTCGCTCCCGCGGGAAGATGTTTGAGACCGGGGACGAAGTCGACCCGCTGCACACCCCGAGGGACCTCTACTGGGGCGTTCATGTCAACAGCTGTGGTCACATGATGCATAGTGATTGTTGGCAGGGATTTTACAAGTCTGTCACGGTGAAAGAACGAAGGGCTTTGCGAATGGGGCAGCATTTTACTGTGGATATCAGTAAGGGGGAGTATTTGTGTCCGCTTTGCGGATGTATCAGCAACACAGTCCTACCAGTCCTGCCTTCCCTGTTTAACGGACAGGGAGAGGGCTGTGTCGAAGAGGTCACCGTCGCAGAATTTCTTAGCAGCATGCAGGACGTTGTCTCTTCAAATTTCAGCTTGTTTTCAGAAGAAGatgaaaagaaagggaaaaaagCTGTACCTCCAGTTTCAGAAAGGTTCCAAGCTATATTCCAAACTCTCCTGAAAAATGGAACAAAATTTTCCGACGGTCTGAAAGACATGATGAAAGTTTTCTCTCAGTCTTGCTTTACGATTGGCTTGGGTGTTGACCCAAATGATGACGACAAGCGTGTTCCAGTTCTGGTGTGGGAAGCCTGTAGTTACACGATACAGAGTGGAGAAAGCGCTTTGAGGTCAGAGGGCAAAACGCCTTTCTCCGGACTCACAACTCGCCAGTTTCAGTGTATGGCATCCTTGACTCGTCAAGCTGCCGTCATTTCAGGAATATTCGCCAACAAAGCCGTCCAGCAGCATTGTCTTCGACTGCTTTCAGTCGTCACCCCTGACGCGGTTCCAGGTGCTACCGGCCCCTCCCTCCTGGAGTTGGACTTGTTCAGCATGATGGTTAAGCTCCGCTTGGTGCTGCCTAGTATGTTATATCAGGAGTCTGTTGACGGCAGTTCCACTCCTGTGTTGAAGAGTATTGTGGGACTGAATTCGCCGGTGTCAATTGACCAGTGTGTGTTTCAAGTTTCGCTTTTGGCGCGGGTGGTCCAAATACTTCTAACCAGCCCTACTGATCTTCCAAGTgatgaaactgaaaatgaacCGATGGATCAGGACAACCCTCCCCATGAGGACGAGGCTGTCAATCTAGCTGCTCTGTGGGGAAAACTTAGGCACTGGGCAGGTTCCCAGTCCTCTACGCCTCATCCCATGCCACTGGCGCTTCTTAATCACGTGAGAGCACACTTGGTACCATTCCTACGCTGTTCAGCTCTGTTCTTTCATTTTCTGACTGAGATTCCTGTGCCAACGTCTTTGTCAGAGGAGCTGGAGAGTCTGTGCCGATACCTTTCCGTGCCCACAAACATAACTAGTTTATTGCAGTGGAGTCAAGATAGTGGTTCAATCACTTCATCGACTATCTCCACGGTTGTTAAGAGATGGTGCAGTCATGAACATGTTAGGAAAACTTTGGCAACTGCAGGAGTGGAATCACTCGGGTATTCTATTAAATCAAATCATTTGCTGAAGATTCCCTTGGACTACAGCGAGCTTATCAACAAAGCGTCGATGTTTACATGCCCAAATTCAGATGGCGACGACAGTCGTGCGCCTGCACTCTGTTTGATCTGCGGCGAGATGCTGTGTTCTCAAAGCTATTGTTGCCAAACGGACCTGGGAGGTTACAAAGTGGGTGCTTGTGCTGCACATGCGCAGAAGTGTGGTGCAGGAGTGGGCGTGTTTCTACGCGTGCGTGAATGTCAGATTTTGTTGATGGCCAATAAGAACAAAGGATGTTTTTACTTACCTCCTTATCTGGATGCGTACGGCGAGACAGATCAGGGATTGAGGCGCGGCAATCCTCTGTACCTCTGTCCCAGTCGCTATCAAAAGCTGGAGAAACTGTGGCTGACTCACTCCGTGGCAGAGGAGGTGGCTCATTGCCTGGAGTCGAACAGAAACTTGCTCTCAATCGACTGGACAAATCTTTAA

Transcript

ENSNQRT00000079531

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18995 all species →	PRT6_C	Proteolysis_6 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042065 all species →	Homologous_superfamily	E3 ubiquitin-protein ligase ELL-like	Interproscan
IPR039164 all species →	Family	E3 ubiquitin-protein ligase UBR1-like	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR044046 all species →	Domain	E3 ubiquitin-protein ligase UBR-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21497 all species →	UBIQUITIN LIGASE E3 ALPHA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0071596 all species →	Biological Process	ubiquitin-dependent protein catabolic process via the N-end rule pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10626	UBR2; E3 ubiquitin-protein ligase UBR2	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.