Gene detail

Detailed information of ENSODKP00000001172.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_002161645.2, peroxisomal membrane protein PEX13 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000001172

AAAACATGAATGGTAGTCCCATTTATCAAAAAGGTCaatttttattaacccatttgttcccaatcctccctttctctactccctgtaaacatgttttcagggggtagagaaagggtgcattgggaacaaatgggtaaaAAGAACGTTTTAAGGGAGATCATATGTTTGAATTATATTATACAAATGTAGTACAGTTTAAATGAACCCACCAAGGAAGCCATGGGAAAGTCTAAGCACCAATTGTCAGAATAGCTCAGGAGTTACAAACATTGGGAGTGATGGGCCAGGAATAGGTGCGAGCTCGTTTGCGCAGACAGACTCGAATGGAAATCCGCCGCCGGTGCCAGCTAGACCAAACCAGATAAATTCAAATGTTCGGACACCTTTCTCAGCTGGTTATGGCGGTATGTTTAGTAACCCGTACTCCAGTTACTTGTATGGATCCCCAGGCTATGGATTGTCTTCTTATGGAGGGGGTATGTATCACAATGCCCCATACAACAATTCATTCTTGAATGGAGTGGAAAGCTACACGCAGCCAACATTCCAGTCATTTCAGTCTGTTATACAAGCGTTTGGTTCAGTAAGCATGATGCTGGAGTCAACACTGTTTGCTGTTCAGAATTCAGTGCGGGCCATtgtcaGTGTAGCGGATCAGTTCAGTCGATTGAGGCTTCAGTTGATTTCAAGTTGGATAGCGATTCTACGAAGCATCAGATACTACTTTCGGAAACTTCTGATAATGTTTCGTGTGAGAAAGCCAATGTCAAATGACACCGTATGGGAGGAATTAACAAATGGTGTTACGCACGATCCTAATCCGGAATCGCGACATTGGcccattgttttatttttcgcCATTGTTCTTGGTACACCTTGGATAATGCGAAAGTTGTTACTGCTAGCAAATATCGATAGAAAATCTCATAAGGATTGGCAAAAAGGGATTGGAGAACATTTTCTAGCAGAAGCGAAATTTTCCTACACCGCTGTCAGTGACGATGAATTGAGCATCTCTCAGCGTGAGATGATTCGGCTTGCACCCAAGGAAATGCAGCCTCACGTGAGGGGTTGGTTGCTTGCATCAAACGGAGAGAAGACTGGGTTGGTTCCAGCGAATTATGTGAAGGTTTTGGGAAAGAACCGACAAAATGCAACTGTCAAAAAAGTGACTCAACCAAAAATTGAAGAGatttcGGTCACCCTCGTTCTGAGCACACCCACATACCACATGTATTTAGGGCCCAGTCAAACAGGCTGCAGTTTCGCTGGAATTACAGTTACAGCTTTTCTGTCGGTCAAAGATGTCAGAAAAGATCCATTAATAAAgcaaacctatggttttctgatgattttagcgGCAAAAGAAGTTAATTCGtataatattagaaacgaaatttggaggcgatcccttgCTAAAACTTTAAGTCGTCATTTTAATGTAACGTTGATTTTAACACGTCCAAGGTAAAACAAAGTGAAcgcatttgttttaatttcttggaAAACATTCAGGAAAAGTTTGATAAATACTGTCTTTGTATTATTGTCGTGGTATAATACTTTCGTGATAAtacattcccagccggcatttacctgttcaaagttaacaatagaaacactagaacaaggtgtgaaatatgttcaaagttaacaataaagacacaagaacgacgcttagcgtcgttttggtgtctttattgttaactttgaacatatttcacaccttgttctagtatttctattgttaactttgaacatgtaattgccggctgggtttaaaCGAAAAACGTGAATGGTTTTCTCTACCATACAATTTGcttcagaaaaatagaaaaaaggtaAACTGAATATGTATATGAAAAATTCACTATTACAATTCATTAAAACATAAgtttggattttgcaaaaaactttttaatagtaGCCATCACATATTAATAATGTTTCTGTTTGGAAATAGCTGATCTTATTGTCAGCAGGTTTTCTGTTAGTGCGTTGACATAGTTAATACTGGGATTATCGGAAAAGAATGAAGGAATGCAAAAGTGAAAATGATATCAACCCGGTAAACAAATTGATTGGAACACTAGAAAAATGCGTGAAATATGGACAAatttaacaatacagacaccagaatgacgttattgacatcgttctggtgtctttattgttaactttgaacagatttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D4A2Y9	Peroxisomal membrane protein PEX13 OS=Rattus norvegicus OX=10116 GN=Pex13 PE=1 SV=3
Q9D0K1	Peroxisomal membrane protein PEX13 OS=Mus musculus OX=10090 GN=Pex13 PE=1 SV=1
Q0P5B1	Peroxisomal membrane protein PEX13 OS=Bos taurus OX=9913 GN=PEX13 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006893 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04088 all species →	Peroxin-13_N	Peroxin 13, N-terminal region	Family	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR007223 all species →	Domain	Peroxin 13, N-terminal	Interproscan
IPR035463 all species →	Family	Peroxin 13	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19332 all species →	PEROXISOMAL MEMBRANE PROTEIN PEX13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016560 all species →	Biological Process	protein import into peroxisome matrix, docking	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:1990429 all species →	Cellular Component	peroxisomal importomer complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000001172.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.