Gene detail

Detailed information of ENSODKP00000001351.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_012566790.2, egg-laying defective protein 27 isoform X1 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

ENSODKT00000001351

acaaatacaagaaatattgaaaaggaCCAAGCTTatgctgttttttttcaaatTCAAAGGTCTGATATACCCTACTTCATATGTGCAATACGCGAATTTAAACGGagtAAGAAAGACAATATCGCAGTTGATGTTGTGTGGTATTATAGACCCTGTGAAATTCCTACTTCTGTGTATCAACTGTTACTTCAGGATAGGAATGCTGAGAATGGTTCATCTGATCATGTACTGGAAAATCCTGTGGTTAAAGAGAGGGAATTATTTATATCAGATGCCATCGATGTTTTTCCTGCGTCAGCTTTAAGGGGACATGCGAATTGTTGCTCATTTTCAGAAGTCAAAGAAAATATACTGGAGTATATTTCCAAAGAAAATAACTGGTTTTATATACTGAGATATAATCCAGAGTCCAGGAGAATGGCAAATGCTAAAGGGGAAATTAGAATCGGAGCAAGTCATCAAGTAAGACTTAGAAAACAAACTGGAGAAATATCTCTTGCAAAGAAAGCCTTTAGTCTTTGGGAACCGTCTATACCAGAATCCCGGTTCACAGTTTTCTCACGAGCTGCGCGGAGTATTACATCATATAATGGCTACTGCAATTCAGGAGAGGGTTCAGCAGATAAAGCAGTCAATGTGCTTTCAGATGATGCAAATATTGCTTATTCCTTTGATACGCTGCATAGAAGTAACTATAACATATCAGAGGCACTTCAATACCTTATAAAAAATCCTTCACCCACAGTCACTATGGTTCCATGGACAGATGATGAGCGGaaaaaattcatgaaaggactTCGTTCATATGGCAAAGTATTCCACAAGATTCGTAAAGAACTGCTTCCGGAGAGACAAACGAGTGAGCTGGTTCAGTattactatatatggaaaaagaCGACTTTTGCAATAAATTCCCGTCCACACAAAAGAGGAGGTCGTAGAAATAATCAATTAGTAAGAAAAACAAGGACAACTAAGCCAAAAGCAGCAACTGTTTCAGAATTTTGTGATTTATATGCATGTCGTCATTGCTATGCAACAAAGTCACCTAACTGGCATCATGCGGGGAAAGATAAATTGCTTCTCTGTTACACTTGTCGTATGTATTTCAAACGTTATGGCCGCATGAAACCATTAAAAGATGACGAAATTCGAGAACCACCGCCATTCATCTACAAAGCAGCCTTCGAGAACTTGGAAGACACTTCAGTATATTCTGGAAGGATGCGAACTAGGAGGTCGTCTACTCCAATTAGCTCCTCAGTGAATAGCATCAAGAATCGCATACTTCAAGAAGAGAGGGAAGAATCAGAGGAAGCTAAAAAGTCACGTATTGCCATGGAGGAAGAACAGGACGCAGATGATGAATCAGAAGGTGACAGCGACTCTGGCAATGCATGCAACGGGCAGGTAACAGGAGAAAGCTCAAGGTCCCAGACGCCCAACGAAAAGAACGATTCCACAGGCGCAAATAATGATGCAACTGAGGCACAGTCGACAACTTTTGTACCGATCAAGGTTGAAGAGAAAGAGGAAGAACCTGAAacaactgaaaataatgaaattacgcCCCCATCTTCCCCTGATATTCCTGATGACCCAGCCATATGCAGCAAAATAGCTGTTAGATTCAAGCATCAAGAAACCCAAGCAGGAAATTCATGTTCAAGGTGTGAGAGGGTGTACATCTATGAAGGACCACGAGAGAAAAAGCCAGTCGAAATCGAGGTAGTGCCTAGGTTGGTCGAAACATCCAAGTTCGATGGCAACTCACAACACCAGCCAGCGCAAATCACCTCCCATTACTTGGCTCAACGTCTATTTACTGAACATGCAGCAAGAGATCAGCAACGATTTTGGTACCATGGACCCCCAGATATGCATGGTCACAGGTCTGTGAGTCCTCCCCCGAGAGAGTTTGTTGTTGATCCAGCATCTAAATTTGCGCAGATACTGAAAGAAGACCAAGCAATGCGCGATCATGTAGCGCCACGGACACCTAGCATACAGCCTCATCAAGGTCTTTCAGGTCATGCTTTTGCCACCAGGGTTACTTCCGAACATTCTCGTGATTTTCGTATTCCTCATGCTGATCATAGTCGTGTGTCACCACCTCATCCGCATGCAAACATTGACGGTCATACCAGATATCCGCATGGCGTAAATTCTCTGGGATCTGGTATCGTTCCACCAATAGAACGTCCGACAGTCGACCCAATTACTGGTGTGCCAACGTTTCAGCCGCATCTCCACTCGCACTTACATACTCACACACATTTACATGTACATCCAGATGATATTAAATATAGAGGACATTTACCTGAAACGTTGAGCGAACGTGAACGTCTAGAACGTGCAACACCGCACCATATGATACCTCCGCAGCAACATCCACCCCACCGTTCAAGTTCCGCAAATAGAGATATTCACGATCTCAATTTGTTAATGCATCATGAACCTCATTTGCGGGAATCGATTGCGCGATCTGTTCCTCCAAGCGTGAGGGAAAGTCCACTGCCAGCAAACAACCGAGATGGAGCTGGAAGTCCAAGTTTTCCACATGAAATTCCGAACATGCATAGTGATCCAGTTGCGTATCATTTAATGGTAACTCAATTTGCTCGAATGCATCAACGTATGAATTCACATAGTAATAGTGGTCAAGGACATGTACAGGCACCGGACTTGAGTCCACATGGTTTACCAGGACCTCCACATCCCCATCACCCTCATTTGAGAGGTGATCACGATAAACATATTCATGAACAACTATTACTAGCTCAAGCTGAGCGAGAAAAACTAGTTAGAGCTGATCACTTGAGATCAATGGAACATGAAAAACAAATGCGTCGTATGATTCCGTCAAGGGAACACTTAGAATCTGCTGCGAAACTCAAAGGGGAGCATCCACTTCTTGACAGAGCTTCCTATAAGCAACCAGCAGATATACACTCTCCTTACCCAGGGActcattatttagaaaatttaaggcGGAGCTCACACGAGACTAGGTCAATTGGTGAAAGAGGGTTTCATGATCGTCTCGCGCAAGAAAGACTAGAAAGGGAGCGAATAGCTCACTTTGAGCGCGTTGTTCACTCAGAGAGATTTGATAGATCACGTCATGATAGGCCTAGTATAATTGGACATTATAAACACGAGACCATAGATTTGTGTGAGGattaa

Transcript

ENSODKT00000001351

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80TZ9	Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus OX=10090 GN=Rere PE=1 SV=3
Q62901	Arginine-glutamic acid dipeptide repeats protein OS=Rattus norvegicus OX=10116 GN=Rere PE=1 SV=2
Q9P2R6	Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens OX=9606 GN=RERE PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003001 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00320 all species →	GATA	GATA zinc finger	Domain	Interproscan
PF01426 all species →	BAH	BAH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR000679 all species →	Domain	Zinc finger, GATA-type	Interproscan
IPR001025 all species →	Domain	Bromo adjacent homology (BAH) domain	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR000949 all species →	Domain	ELM2 domain	Interproscan
IPR043151 all species →	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan
IPR013088 all species →	Homologous_superfamily	Zinc finger, NHR/GATA-type	Interproscan
IPR040138 all species →	Family	Mesoderm induction early response protein/metastasis-associated protein	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10865 all species →	METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0016575 all species →	Biological Process	obsolete histone deacetylation	Interproscan
GO:0016581 all species →	Cellular Component	NuRD complex	Interproscan
GO:0042826 all species →	Molecular Function	histone deacetylase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000001351.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.