Gene detail

Detailed information of ENSODKP00000004165.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_004207307.2, trafficking protein particle complex subunit 12 isoform X1 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000004165

ATGGGTCAGGCAAATAGTGCTGAGGGAGTTAAACTTAAAGCAGCAGTTCAAAAGTTGACAAAGTTGGAGTTAAAAGATTTGGAAAGAGTTTTCCAAGAACTCTCAGAAGCATCTGACTCTGGACAATCAGTTATCAAACAACCAACTTGGTTGAATCGAGACAGATTTGctgaaatatttggaacaaatgaaCTTGTTGTGGAGCAGTTGTTCGATATTTTTGACCGGGATCGGAATGGAATCGTGGACATGCAAGAGTTTGTTACTGGTATGGCATTATGCTTACATGGCAGTATTAGAGACAAGTGTCAGTtgctgtttaaaatatttaatctcgaTGGAGACGAAGGAGTTAGTCCAGAAGAACTAAGTACAATTCTAACTAGTTGTCTTCAATCTGCTCACTCACTCTTGGTACAAACATTGAAGCTGGAAAGAATGCACTTCTCTGAGGATGGATCGAGTTCAGGAACAAGTCAAAGTGAAGCGTTAATGGTGTCCGTAGTTGTCGACAAaaTCGTTACTGATGCATTCAACAAATGTGATACTTCCAGGAATGGAAAATTGGAAATCGATGAATTTGCACGATGGGTCCATAAACATCCAAAGCTGATGAACAATTTATTTGTGCTGCAGTGCCCGAAGCCTTCGCAAATAAATAgttCCAAGTCTAGCGGAGGTGACTCGATTACACATTCAGAGTCCTTGTACTCAGTTATCCAAACGCCAACGGAGGAGATAGATGTATTCTTTGATGTTTCCCAACAGTTGCCACAATCATCAGCGGAAAATAATCAAGCATCCATGGAAAGCAAACAGACTACGTTGCAAGATTTATTTTCAACACCAGCAGAAACATCTGAACAAGAAAGTTTCTTCGATTCTCTTGGTATAAGTCAGCATCCCACAGACGGTGATACATCTTTACCAAGACCAGCCAGTGAGcaatttttatcatcaaactTAGCTGAATCTAAAGATATTCTTGGTGGCAGTGAAAATCACATtgaaagttttgggaaaaatGCATGCATACTACCAAAACATATGCAGCATATTACAGGGTCTGACAGTTTGCACTCCATTACTTTATCACAAGATTCGTTATCAGAAGGAAAAGATAGCAGCGGTGAATTTGCAACGACGAAACAGGAAATTGAGGAAACATCAAGTCCAAGTGCTGAAACGAAAGAAGATATAGTTGGCAATGACAAAATATGGCATCCACTACAAAAACAAAGTCAGTCAGAGGAAGACGCGATGCAGGAGCAACTTGAAAATCAAGTAGAATCAGTACCCACATCAAACGAATTATGGACCAATGACCttaatattaaagaagaagaGATTGCCATAGCAAATGCCACTCTAGTATCAGAGCCAAGTTATGAGAGTGGGTACGAAGTTGGGGTGGAGCCATCTATGGATGAAATTGAAGAAACAGttaaagataatgaaaagaaAGGGCACTCGTACTGGCCACCAAGctataaaacagaaaatttgataAACGATTTTCGATTGGGTCACcatattgatgaaaaaaagctAACATACCCCTCTGTACTTATTGAGGGACTTATGGGTGACCCAGCGAAAGAGTTGGTAGCAAAATACCTTGGTGAGCAAGAGGCATCAAAACGTCCTTTCCCAACTGCTGATAGTGTGGAACTTAACGAAAACGGGTTAAAGCTATTGCTGACTCATGGCTGTTGGAGGGGAGCGATCGatttcacatcaaaatatttagcacATTATGGCCTTGGATTAAATCAGAACCAAAATTCGAATCAGAAAAGAACGATGTTAACTCCAACTCTCATACAgATATGGTTTGTGAGGATAGCATTGCTTGTGAAGATGAGAATGTTTAGCCAGGCGGAGGCAGAATTGAACGCGTTCAATAATCTCGACGGACCAGATCTGTATTATCAGTTTTATCCGCATTTATATCACGGTAAAAGAGgtAGCATGGTCCCGTTCAGTTTTCGCCTTCTGTTTGCAGAACTACCTCAACATAATGGCCGTCCTAATTTAGCGTTGGACCGTCTGTattctttacagaaaataatttcaacaatacGTGAAAACCTCTCAAAAGGCTTTCAGGAAGACGgtagtaaaaatgatatttacaaCGAAGAAGAGATAAAAGAGCTAAACCAACTTTGGAGTGCGCGTTACCTTCGTGTGCAATATGCATTAGGGAATTGTTTTCTTGGAATGAAGGAATATAATTTAGCCGTACGTCTGTTCAAAAGCATTATGAAGCTGGAACCACAGAGAACATTGTCAATTCTTTCCGCTATTGGAAGAATATACTTACAAGTTGGAGATGTACTAACAGCCACGATGTATTTCAAAGAAGCTGACAGTGTTAAGTCTGAGGACCCCAGAAGAGACAGTATTTTATCCATGAATAAAGGTTATCTCAACCTAGCGGAGAGCAATTATAACGATGCCTATCAATTCTTCACGGCAGCAGCTACACAAGACAAAGAAAACTTAGCTGCAGTCAACAATGCAGCTGTGTGTCTCCTGTTTTTAGGTAAAGTGAAAGAGGCAAGTAATCTTCTCGAACGAATGGTTTGGGAATACCCCCAGCAAAGCCTTCATCAAGATGTACTGTTCAACTTGAACACGATATACGAATTAGAGACATCAAGGGCTCTGCAAAAGAAGTACAAACTTTTAGATCTTGTCAGTAAGCATAAAGGCGATGGGTTCTTTTCGCAGTGTTTGAAACTTACGTAG

Transcript

ENSODKT00000004165

agtGTATTACAATTATGTAAATACCAAGAATGGGTCAGGCAAATAGTGCTGAGGGAGTTAAACTTAAAGCAGCAGTTCAAAAGTTGACAAAGTTGGAGTTAAAAGATTTGGAAAGAGTTTTCCAAGAACTCTCAGAAGCATCTGACTCTGGACAATCAGTTATCAAACAACCAACTTGGTTGAATCGAGACAGATTTGctgaaatatttggaacaaatgaaCTTGTTGTGGAGCAGTTGTTCGATATTTTTGACCGGGATCGGAATGGAATCGTGGACATGCAAGAGTTTGTTACTGGTATGGCATTATGCTTACATGGCAGTATTAGAGACAAGTGTCAGTtgctgtttaaaatatttaatctcgaTGGAGACGAAGGAGTTAGTCCAGAAGAACTAAGTACAATTCTAACTAGTTGTCTTCAATCTGCTCACTCACTCTTGGTACAAACATTGAAGCTGGAAAGAATGCACTTCTCTGAGGATGGATCGAGTTCAGGAACAAGTCAAAGTGAAGCGTTAATGGTGTCCGTAGTTGTCGACAAaaTCGTTACTGATGCATTCAACAAATGTGATACTTCCAGGAATGGAAAATTGGAAATCGATGAATTTGCACGATGGGTCCATAAACATCCAAAGCTGATGAACAATTTATTTGTGCTGCAGTGCCCGAAGCCTTCGCAAATAAATAgttCCAAGTCTAGCGGAGGTGACTCGATTACACATTCAGAGTCCTTGTACTCAGTTATCCAAACGCCAACGGAGGAGATAGATGTATTCTTTGATGTTTCCCAACAGTTGCCACAATCATCAGCGGAAAATAATCAAGCATCCATGGAAAGCAAACAGACTACGTTGCAAGATTTATTTTCAACACCAGCAGAAACATCTGAACAAGAAAGTTTCTTCGATTCTCTTGGTATAAGTCAGCATCCCACAGACGGTGATACATCTTTACCAAGACCAGCCAGTGAGcaatttttatcatcaaactTAGCTGAATCTAAAGATATTCTTGGTGGCAGTGAAAATCACATtgaaagttttgggaaaaatGCATGCATACTACCAAAACATATGCAGCATATTACAGGGTCTGACAGTTTGCACTCCATTACTTTATCACAAGATTCGTTATCAGAAGGAAAAGATAGCAGCGGTGAATTTGCAACGACGAAACAGGAAATTGAGGAAACATCAAGTCCAAGTGCTGAAACGAAAGAAGATATAGTTGGCAATGACAAAATATGGCATCCACTACAAAAACAAAGTCAGTCAGAGGAAGACGCGATGCAGGAGCAACTTGAAAATCAAGTAGAATCAGTACCCACATCAAACGAATTATGGACCAATGACCttaatattaaagaagaagaGATTGCCATAGCAAATGCCACTCTAGTATCAGAGCCAAGTTATGAGAGTGGGTACGAAGTTGGGGTGGAGCCATCTATGGATGAAATTGAAGAAACAGttaaagataatgaaaagaaAGGGCACTCGTACTGGCCACCAAGctataaaacagaaaatttgataAACGATTTTCGATTGGGTCACcatattgatgaaaaaaagctAACATACCCCTCTGTACTTATTGAGGGACTTATGGGTGACCCAGCGAAAGAGTTGGTAGCAAAATACCTTGGTGAGCAAGAGGCATCAAAACGTCCTTTCCCAACTGCTGATAGTGTGGAACTTAACGAAAACGGGTTAAAGCTATTGCTGACTCATGGCTGTTGGAGGGGAGCGATCGatttcacatcaaaatatttagcacATTATGGCCTTGGATTAAATCAGAACCAAAATTCGAATCAGAAAAGAACGATGTTAACTCCAACTCTCATACAgATATGGTTTGTGAGGATAGCATTGCTTGTGAAGATGAGAATGTTTAGCCAGGCGGAGGCAGAATTGAACGCGTTCAATAATCTCGACGGACCAGATCTGTATTATCAGTTTTATCCGCATTTATATCACGGTAAAAGAGgtAGCATGGTCCCGTTCAGTTTTCGCCTTCTGTTTGCAGAACTACCTCAACATAATGGCCGTCCTAATTTAGCGTTGGACCGTCTGTattctttacagaaaataatttcaacaatacGTGAAAACCTCTCAAAAGGCTTTCAGGAAGACGgtagtaaaaatgatatttacaaCGAAGAAGAGATAAAAGAGCTAAACCAACTTTGGAGTGCGCGTTACCTTCGTGTGCAATATGCATTAGGGAATTGTTTTCTTGGAATGAAGGAATATAATTTAGCCGTACGTCTGTTCAAAAGCATTATGAAGCTGGAACCACAGAGAACATTGTCAATTCTTTCCGCTATTGGAAGAATATACTTACAAGTTGGAGATGTACTAACAGCCACGATGTATTTCAAAGAAGCTGACAGTGTTAAGTCTGAGGACCCCAGAAGAGACAGTATTTTATCCATGAATAAAGGTTATCTCAACCTAGCGGAGAGCAATTATAACGATGCCTATCAATTCTTCACGGCAGCAGCTACACAAGACAAAGAAAACTTAGCTGCAGTCAACAATGCAGCTGTGTGTCTCCTGTTTTTAGGTAAAGTGAAAGAGGCAAGTAATCTTCTCGAACGAATGGTTTGGGAATACCCCCAGCAAAGCCTTCATCAAGATGTACTGTTCAACTTGAACACGATATACGAATTAGAGACATCAAGGGCTCTGCAAAAGAAGTACAAACTTTTAGATCTTGTCAGTAAGCATAAAGGCGATGGGTTCTTTTCGCAGTGTTTGAAACTTACGTAGACAATAGCATTACACGAGAAAAATTGATGTAGAGCTTCTGTggaaagtaaaagtaatatattttagtGAGCAGACGTGAGGATTAATtcagcttttgtaaattttaagcaTGCGGTCTGATAGCTTGTGGCAAAATAACCCCGCTGGTAGAATTAATCGGTAGAAGTAATTggaaaaacaacttcaaacagctTTTGCTAATTTACGTTCAGCTCGGTACGTATATATGAAAGATATAACATTTAGAGAACGTTGAGCGTACTCGCGAATTCATTGATTAAAGAACCGCAACAATATGGAGCAACAGTCAAGTAGTTGATTGTGATGCTCAGTTGATGTAAATCAATCCTTGAAAGAAGAGCATCTTCCAAAATTTCGCTTTTATAATATATTCCGTTGTGAATATGGACAGTAGTAGATTGAAATGAGCAAAGTGGAACAagctttttatagttttcaagcaaattgtaattatttataattcaaaccgcaaaacaaatctgaaaaacaaagtgaaaattcaaaatttgtaaagaatatATACGTTTTTTATTCTCCcgca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WVT3	Trafficking protein particle complex subunit 12 OS=Homo sapiens OX=9606 GN=TRAPPC12 PE=1 SV=3
Q8K2L8	Trafficking protein particle complex subunit 12 OS=Mus musculus OX=10090 GN=Trappc12 PE=1 SV=2
Q2KI69	Kv channel-interacting protein 4 OS=Bos taurus OX=9913 GN=KCNIP4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006095 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14559 all species →	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF13202 all species →	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21581 all species →	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0030008 all species →	Cellular Component	TRAPP complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000004165.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.