Gene detail

Detailed information of ENSODKP00000004427.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047141875.1, ras association domain-containing protein 1 isoform X1 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000004427

tttagaaaatgtttaatgaCTGCATTAAGTGGTTTAATAATAGTTTGTTGGTTTAAAATATTGTTGCGAAAAATCTGGTGTGGATTCAAATTGCTTACATAGATAAATAAAGAGTTGTTCATTGTTTAACAAACATGCATATCAATAATTGTGATACATTTGGAAAAAACTACCTTACCGCCAGCACATATTGTAAGTATACATGTCACAGCAGATGTACACCATATATCGACCTCGAGTGCCCAAAAGCTCCAACAGTAGAGAAATCACGTGAAGAAATAACTAGGGAAACTTTGGAAGTTTTGagTCAAAATGATGGTGGCTACGGCACTGCGAAGAAAAACAATAATCTACCAGATTTTGTATCCTCCACCATGGagcttcaaaaaattatcaacGATTACAATACGAAAAACTCTCTTATCATGACACTGCACGAAGACTGCTCATTTGACGGTTTTATACGTGTACAAATGAGCTTAAGTCGACCAGTAAATCTGTCAGGAGATACCAGCAGCTTGACCTTAAAGAGGGCAGTTATGAGAACAAGGTCAGGGCGCGCTAGACGTCCACTGTCTGAGTCCAGACGACCATTATCTGAAGtatttaatactaataaagacCTTACATCGGAAGAAGAAGACTCTGGTATTGAATCACAATCAGCATCATCGACATTGTCATCGGATTTATCAAAGCAGCCTTTTAGTAGAAAGAGAACAGGGAGGCGGTTGAGTTTTTACTTGCCCAAGGGAACTCTTAAACCCCTGCATGTCACAAGCTCTACAACAGTTAAAGAAGTTATAGAAGCACTGCTTGCTAAATATAGTGTGACAGATAACCCGAAGAAATACGCGCTGTTTGAACAGTTCAACAAGAAAACAGATGGTGAAAAAAAAGAAGTTATATACCGGAAACTGAAAGACGATGATAAACCGTTAGTGCTACGCTTGATGTGGGATACAGACAACCAAAATAAATCATTTGCTCTTAAAGAAGATGATGATGGTGTAATACAGTGGATGAACTTCGAACTACCAGAGTTAAATAActtcttaaaaatcttacagaTAGAAGAAGACGAATCATTAGCACAGatATATCACAAGTACGAAGAATATAGGGGACTTTTACAGCGTGCTATTAATTACAAAAACGAACTCCAAGGGCCACATTCATCAGAGTGCTAGCGTAATTAGCCTATCGAGTTAACGCTACATAATTAGTAGGGCATGTGTAAAAGATAAAGTCAGGAGTTACTAATCTTAATGCACTTGGAATATGCAAATGTATCGATAACATAGAAAATGGTGCCTATCCGACTTGCAGGCTGTAATACATGAAAGAGAAACTAGTCTACTGATACTGGTCAAGCAAAATTCGTTacgtgaagataaaaaagctgtaagtccattttatcataaaaaatatttttgatagaaaatgaatgtaagacaccttGGGTGTCTTACactcattttctatcaaaaatattttttatgattaaatggACTTAAGGttgatttattttcatgtgacgaattATCTCTTAATCCCGAAATAATaacttcagaaatttcattttaacactaaaaaaagCAGGtcatagcatggaactataatacgagcatgGAACTATAGTACGTTCGTGTTATAGTTTCATGGTCATACTAAACAAGAAGGAGATAGGTCAATGAATATTTGAATGAAGGTGTAATATTTTGGTtcagttatttttatatataatatttcgTGAAACAATAATGCAGAAATGGTGTATATGTTGGATATCAGACACTGTACAAATGTGTAAAAATGGATGAATTAATAGCTATACCATATGTGaatattcatttagtacgtacgtaaaattttccgaaaaagtaacatttcttacccctgttacgcacacgtacatgtgcgtatcagggggttagaaatcttagtttttcagaaaattttgcgtacgtactaagttAATGATCCCTATGTGAATAAGAAtgcattaaaatcattttacTTATTAACCACTTCACGtcaatgttccaattttataccCCCGTGAAAATgtcaggttttctgacgttttcagggggt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WWW0	Ras association domain-containing protein 5 OS=Homo sapiens OX=9606 GN=RASSF5 PE=1 SV=1
Q99MK9	Ras association domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rassf1 PE=1 SV=1
Q9NS23	Ras association domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RASSF1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005443 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF16517 all species →	Nore1-SARAH	Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033614 all species →	Family	Ras association domain-containing protein 1-6	Interproscan
IPR011524 all species →	Domain	SARAH domain	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22738 all species →	RASSF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09850	RASSF1; Ras association domain-containing protein 1	-	Non-small cell lung cancer	ko05223	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.