Gene detail

Detailed information of ENSODKP00000005479.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_002157595.2, importin-13 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

ENSODKT00000005479

aTGAAACCTTTAGaatgttttctttcaatattattttcagttaGGAAACCTGACCACCTAGAGTCTAGAGAACCGCAGAATGTAGCCCAGATAGATGTATGGCAACAGCAGACCTACAATCCAGTGGAACAAAAATCAGCTCATCAGTGGTTGTTAGAGGTTCAGAAATCTGTTGAAGGTTGGCAAGCTTGTTGGTGTTTACTCGATTCACAAAAAGATCTAACAATACAATACTATGGTGCTGTTATGCTTTATCACAAAGTTTGTCATAATTTTGCAGACCTAGATGAAACCCAATGCaatgaattgaaaacaaaactttgtaacttGTGTTTAAGTTACCGGGGGaatcataaatttgttttgactAAACTCAGTGCAGGGTATGTTGTATTACTTATTCAAACCTCAAAGGACGAGTTTAGACTTCGTGAGCATTTAACAGCAATTGAAGAGAAAGCAAAAGAATTTCAAGTGGACCcaagtcattttatttttgagttaCTGTCTGGCCTACCTATAGAATTCAGAAAAATTAGCTCAGCACCTTCTAAAAAACTGTTAATTCGAAATTTTATTCAAAGTGATTTGCCAGTACTATTAGATACCTTCAGAAACATTCTTGAACAATATTCTGAATCAAAGCAGTATCAGGACAATGTACTAACATGTCTAGTATTGTGGATGGAGTTTCATATCCCTGTTGAACAAGTGATCACATTTATTccaatacttttagcaaaaatattagaACCAGAGTTGTCCAGTAAGGCAAGTGATGTACTTGTCGAGATAGTAACAGCACCAACAATATTTTCATCACAAGGACTTATATTTAGTATATTACATCAAATATTATCATTGGAAAATCATTTGGTAGCTGCATTCAAAGAAGATAATGCTGATTTGCTAGAAAATATGTGCGTTCTATTTTCAAACCTTGGTGAAACACATTCCAGGTTGTTTGTCAAAGCCATGGACACAGAAAATCAAAGAGCCGTTTGTAGCTTAGTAAAACTAATGTTAAAATTTACATCGGCCAAAGGTgtgtttttaattgatgaaacCTACAGTGAACTGACCTTtaatttctggtactcatttcaaGATGAGCTGTGTGCTATCGATCCTGCTCAAGTAACCATTTATCACACACAGTTTTATCAAGTGTATTTATCTCTTTtggaaatctttttcataaagtgcCAGCTACCTCCGGATGATGTATACTGTACTTTAAACAGTGACGAGAAGGAGAAATGGCGATGTTATCGCATTGACATTCAAgattttatgttatatttataCACATTGCTTCAAGATAAATGTTTGATGTACTTTCAGACTAAGCTTCATTGGCAAGAGTTTGATTGCTGTCTTCACTTGCTGAAGGGGGTAGCTGAGACAGTCGACCCAATGGAATCGGAGTACTTGCCAAATATCTTGAATATGCTTGAAAGAATACCCAAACACTTAAACGTTATCGAGAGCTTAGTACTTTTCTTAGGTTCAATGTCAGAGTGGTTCAACTGCCACCCAGAAAGCATCAGACTGGTGCTACCATTTATTTTAGAAGGGCTGAAGCACACCAGCGCCCAGTCCACATGTAGTATCTCTCTCAAAGAAATATGTCAGGAGTGTACACCAGTGTTTTCGGAAGAAATGGTTGCCGCTGTTATCAGTTCTTGTGTGGAGTGTATTTCATTATCTCAGACATCCTCGAAAGCTGTCGTACGTCTTTACAATATATGTGCATCTGTCATGTCGGCATTGCCGTCGTCACAAATTAGTCGTTATTTGAATTTGGTTATTGTTCCCCTACTTGAAACTTTGCAGCTGTCAATCAGAAcgattgaaaaaacaaaaattattcattttgtcagTTGTTTCCAAGCTTTCTTCCAGGGGCTTGAACAATCAGAAACATGTGATAATCAAATTACATTACCCGTATTCACGCAACTGCTACCACTGATTCAGCAGTTGATTCATAGTTTTTGTGAAGAAGATGTCGTTGTGTCGATAATGTCGTGTAtggcaaaagcttttgaaatcgGTCGAGAGATACTTGCAAGTACGGTAATGACATCAGTTGACGTATTAATGACGGTGTTCAAGGTGAATCCATTTTGGTGTGTTATTGACAGTGCCACCatagttatttcaatatttggtaAAGTACaacagttttcacaaaatttgtggaagttttttgaagaaatatctagTACTTGTGTTGCCCTAGCCAACAATGAAGAAGGGAGACAAAGACCTGATTGTATGCAGAGTTTTATGAATTGTATAACCCGGGTTACAAAAACAGTACCAGAATTTATATTCAAGGATTTTGAAGTTACAAAATCTTTACTGAACTGTTCGTTACTGTTATTGAACCATAAGGAACTTCCAACGCTGAAATGTTCCACCTATTTTCTTGTAGCGTTCATAAACATTGCAAATTCCTACGAATATGGCTCCAAAACAATCGAAATGATAGGACAGGATATTTTCTTACAATGTTTATTATGTATAGGTGGAAACTGCCCACGTCATACCACCGACTTATTCGCTGAAATTCTCTtagcatttaataaaaattttgtgacGTTGCTGGCGAAATGgtttaacaatattttcagtaAGGATGGGTTCCCCACCAGCTCTGtgacattattacaaaaacaacaatttcagaAAGCAGTCCTTCGTGAAAGAGCTAATAAACGTCGTATGAAGGAGATGGTGAAGGAATTCGCACTAGTTTGCCGTGGAATAGACGGCTGTACTTATgctcaataa

Transcript

ENSODKT00000005479

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7YWD2	Importin-13 OS=Bos taurus OX=9913 GN=IPO13 PE=2 SV=1
O94829	Importin-13 OS=Homo sapiens OX=9606 GN=IPO13 PE=1 SV=3
Q8K0C1	Importin-13 OS=Mus musculus OX=10090 GN=Ipo13 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005866 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18806 all species →	Importin_rep_3	Importin 13 repeat	Repeat	Interproscan
PF03810 all species →	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan
PF18773 all species →	Importin_rep	Importin 13 repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR040520 all species →	Repeat	Importin 13 repeat	Interproscan
IPR001494 all species →	Domain	Importin-beta, N-terminal domain	Interproscan
IPR040709 all species →	Repeat	Importin 13, repeat 1	Interproscan
IPR051345 all species →	Family	Importin beta-like nuclear transport receptors	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12363 all species →	TRANSPORTIN 3 AND IMPORTIN 13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000005479.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.