Gene detail

Detailed information of ENSODKP00000006279.1 in Millepora complanata

Genomic Location: :...
NR annotation: CAD7639105.1, unnamed protein product [Oppiella nova]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSODKT00000006474

GCGAACGAAAGCGCAACAGGAAAGAAGAGAACGAAAAAGATATAGCTAGCttgttaataattaaaaaagttaaagattaaAGATATTCTTTAGCTAGGCAACTAGGACCCTTGCCTAAACCTGACTCAAAATCTCGGGATATGCGGTTAATTGTCTTATTGGAGATTGGAGCAATTATTTTCAATGTAGCAATATCTCAAGGATCAATACGGCATTGTGCTGTTTCTGGTTGGGGAATGTGGTTAGAATGCAATGCAAAATGTAACGAAGGATTTGCAGTAAGAAAGAGGACTGTCATTCAACAGCCTTCGAAGAATATATTTTCGAAACCATGTCCAGCCCTGTCTGAGAACAAAAGATGTGGTACTCCCAATAATGGTTGTCAACATTTCTGTGAAAAGACAACTGGTTCATGTTATTGTAAAGGTGGTTTTAATCTCGGGAATGATCAGAAGACTTGCGCAGATAAAAATGAATGCTATGAAAATGATGGTCTTGGACCATGTGACCAGAATTGCACTAATCTTAAACCAGGTTATCAGTGCTCTTGTTTTAGAGGGTTTTTGCTGAAAGACAAGCATCATTGTATAGATAATTCTGCTGAAAGTTGTAGCAAGTTCCAGATAAGGTCAAAAGAAAATGGAGAATGCATTTGTAAGAATGGGTTAGAAGGACCAAAATGTGATAGGAACTTAACTCGATGTAACCGAAAAATTTGTAGCTTTGAAAAAGTGTGTGCAACgacactaaattttttaaattggaatAAATGTTATGGAAAATTTTATCTAGTTCCAGTTTTGCTCCATCTTCCATTCAAAACATACTCTGCcaaaaactttcattataaaGTGGAAGAATATGTGACTGAGGTCTTAGAAGGGAGTTCAGGAAGGAAATCATTGTATAATTTGAATTAtgatagaaagagaaaaagaaggagTAATGCCTTTGATGTAGTTTATGTTGAAAGTTTTGATCCTATCAAAGTAAAAGCTGCTTAtacttttgttacttttcttgtttttgatgtCAAGAAAAGTTTTAAACCATATTCTAAACAAGAGATCTGCAATAAGTTAGTTGATTCTGATATAGCTTGTATCTCAAAAGTTGATTGTTATATTCTTAGAAGTGTTGGAATCAAATGTCCAGATGTTTTTGAGCTGAATACAAATCAGggcaaaacaatgcaaaatgaaacaaaagcaggACATAAAATCAAACCAtggattttcattttgatatttgctttactttttttgGTTGTCATagcattgtttttattcttttataaaaagagGAAGAGATCCTATGGTAAAAGTGAAAATTCAGTTGAATATAGCGATCAAAGTAATGCAGAACCTTTGATTATGGGGAGTGGTTCACAGCCCAATGCCAATGGGATCAACACACAAAGAGTAATTGCATCACagaacaattttgatgaaaaagtattttcatcCAATTGCAATGATAAAACACGAGAACCATTATATGAGTCCATACCAAACATCATGGATGAGAATAATTATGTTGATATGAACATGGAATCTTCTAAGTATGATATGCCTAAGAACAACACTGGAAAAAAAGTGAATGATCTCTGTgtagatatttcagaaaaagaatccaGATATACTACCCCACCTGCAAGAAATATATCTAAAGACAAAGAGAAGATTTCTGTAAACAATGAGGGCATCGCATGATTACTGACATGATAGCTAGTGGTATGAACAATGATTGAAATGGTATGAAAATGAACCAATTAAAGATGATTCTTTCTCAtaaatgtcaaaatgtttttctaatgtatttttgattgcttcattCAATTACCTGATAAAATGTCCATTTTCTAGGCACTTTCAAACAGTAAATATGTTGGCACAGGGAATTTCAGAAATTGATTTTTGCAGTATGACCTAGTGGCGCTGTTAGTATATGCTGGATTGCCATTCCAGTGGTCCGGCTTTCAAAGCACTTGGTGGCTTCATGGTGGCTTCACATCTTCAAAGAATTGTCAGACTTGTGGATTTTGtggttaaaaataaactttttctttgtatTGATTCTGCAGCCTCAAGGCAGTGAGATCCTATCCATTaaaaaggttacctctgctacaaaacgataactacTCATAATGTGTCATCTGAGACACAggttaagaacttttttatttcgtagaaaggttatgttccattctcaagatattcaagtttttgtgtttttaggcATTCAACGATTTACCAAATCTGTTATGTCATCATGAGTATTAGTActtgagacagggtgcattttggaatatatcttttgaacgaCAACTCATAAAGTCACCAAAGTTGATGATTATAAATATAGGCAATAGTTTtgaggaatcttttgaacaatttggaggactgtgATTAAGTTCTAGGTTTCCAggttcttttcaatttagcaacatgctccaattactcaataaccaattatgtaaagattccagtgtttcacttttttgaaacagTGAATaggggacatttaaaaatggtaaacgtCAACTTTTGAAAATGGCCAGACCTCagtatattgtcattttaataaaatcataaaagggcctagaactagtttccagtctccagcattgatccaaaaacatgttagaaatatttgtcatatagTAAtaacacactagtatttgaccaaatttcaggattcaaaagaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19028	TSP1_spondin	Spondin-like TSP1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044004	Domain	Spondin-like TSP1 domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR051505	Family	C-type lectin domain-containing protein	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14789	CHONDROLECTIN VARIANT CHODLFDELTAE.	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan