Gene detail

Detailed information of ENSODKP00000009437.1 in Millepora complanata

Genomic Location: :...
NR annotation: XP_002160865.1, ribosome biogenesis protein wdr12 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSODKT00000010184

taagcaatgtGTTTCTGACTAGtacaattaaagattttatcaacACGAATAGCTTATCAACAGAATCAGTGCTGGAAATAGAAGTGGTACTTAGGGAAGAATCACCAAAGAAAATAAACACTCTTCTTCACGACGATTGGGTTAGTTCTGTAGATTACTCAGGTAGTCTAATTATATCAGGAAGTTATGATAATTTGGTTAATATTTGGCATGAAAATCAGGGAAAACACCTTGCTGCCCTGGAAGGTCACACAAAGCCAGTAAAATCTGTTGCTTGGATTCCATATCAGAATGTAGACATGTTTTTATCAGGATCTCAAGATCAGACAATACTAATATGGGAATATAATTATGATGGCAAAGAAAAGGATCTTAAAAGTGTTGATTCAAAATGCATTTGTCGTGGGCATAGTGGAAGTGTTGATTGTATTGCTGTACACAGAAACTTGGCAAAATTTGCGAGTGGTTCTTgggataaaatgattaaattatgggattttgatttgtcagttaatgatgaaataatagatgaaagcaAAAAGAGGAAGTCTAAAGACAAACAGGATGGAATCATAATTAAGACCCCTTTAGTAACATTTTCTGGTCATAAGGAGCCAGTTTCTTGTTTACAGTGGTGCACAGAAAAACAGCTAATTAGTGGCAGCTGGGATCATTGCTTGAAGATCTGGGATATTGAAAGTAGCATTAATAAAGAAGCAATTTCAGGAAACAAAGTATTCTTAGATATTTCTTATTCATCTTTAAAGAATCTTATAGCTACTGGTAGTACAGATAATATTATACGAATGTTTGATCTTCAAAATATGTCAGGTTCAGTCATTAAAAGTACACTGAAATCACATAAAGGATGGGTATCTTGTATTCAATGGTCACCTTATAATGAAAATCATTTAATAAGTGGATCATATGACAAAAAGTTATATATGTGGGATGTTAGGAACAGTGAAAGCCCATTATTGGAAATTGATGAACAAGATGATAAAATCATGTGTCTCTGCTGGAAGGCAGAAACTATATTAAGTGGCGGAGCAGACaataaagttcatatttttagaGGACagaaatgaataaatcaaaaataaaaaagttttttgtagtatttaaattctttttacaacaaaattaaagTTGCTTCTATACTGTTCCTTTTAATCCATCAACTTATATTCACATGATGAGTTAAATGTTCTCTGATGAAGTGTGGCAGTTTAGTTGAAtttcacattttatgaaaatccacAACAAAGTTTTCAGATTCTGTATAATATACTTATGAGAATAAAATCTATGTATCCATTTTGTACAGGGTTCATAGAATTAACTCAGTCatttcaaagtttatcaaaatggaatgttgcaaatttatttgtttgatttcataTTTATTGGCCACCGGTTGACACCTGTTGTGATGTTGAATCCAGAAAAAGCTATTTTCTGGTTTTTAAACCCTGATTTTCGGATAATATCCATTCATAAATAAATGGATAGTTATTTTTTTCCCAGGCAAACCATTTAGAGGAGAaaggcctagtgggttaaggtgttacagtaagaattggaaggttcccagttcaatcCCCACCTTGTTATGAGGCTCCTGGTGTCCTTTGGGTTGAACTTGTAGTatcacagtgattaacatcgggtgaatGAGGCTGTCCCCAAGATAGTGGTCGAAAGTTGCTCATAGGGCAGCCAAAtagaagttaaaagaaaaaaaatagtgcaATCACTGAAAAATTAAGTGCAGGGTCAGAGCTATTTGGATCTAGAGATTCAGAGCAGATTTCAGACCACTTTTGGATTTTGTAGCTACATTTGTTTGGGACTTTTCAACaagaaaaatggatactattttggACCAGTAATTTGGACTAAAGGCCCCTTTTTCCAAATTATTGTTGGAGATGAATTACTCCCTTTCTGTTGACACATTTACACTGAAATATATGGTTGCAGGCAGGAAAACTTAGGCTTTGCATCTATGTGGTCTGATGATGAAAACCCTGAGTGAAGAGTTATGTATTACATCCTGGAAAAAGCTTTTAttcctttctgttttt

Protein

Uniprot

Gene family

Uniprot term	Description
A7RHG8	Ribosome biogenesis protein WDR12 homolog (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g82024 PE=3 SV=1
B0W517	Ribosome biogenesis protein WDR12 homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ001500 PE=3 SV=2
Q17BB0	Ribosome biogenesis protein WDR12 homolog OS=Aedes aegypti OX=7159 GN=AAEL005041 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19855	WD40 REPEAT PROTEIN 12, 37	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan