Gene detail

Detailed information of ENSODKP00000009786.1 in Millepora complanata

Genomic Location: :...
NR annotation: XP_047122777.1, uncharacterized protein LOC101240962 isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSODKT00000010544

TTTTAATTGGCGACGCAGCATTTTTTTTGTGCCAGCTTCGAGTTCTCGAAGATAACCTATAAATAATGAACAATTATTGCATCGACATTTTtcgttaaaagttttttttgaaactcaAACTGAAGAATTTGAGTATGAAGCAAACACTGAGTTTAAGTTCAGTCACTTCAGCAGATGTAGATGCAAAAGAATATGTCACTTACAATCATAAAACGGAATCTGTTGATATTCTTGCTAACACCTTCAATGTATTGAAAGGGTTATACTTTTTTAGGGAGGAAAATTTGAACGTGGATGATTCAAACTCGGAATCTGGAATACACGAAAGAACATGCTTTTGGGATTTGCCAGTGGATATTCAAATTTACATACTTTCGTTCTTGGATTTAAAATCACTCTGTAGAGCATCGTCAGTATGCAAAAGTTGGAGTGAAAATGCAAATGATGAATTGCTATGGGAAAAGAAATTGAATGTAGATTCAATGAACTGGGATAATATCGATCATTTAAGTCATCCAAAATTATACAGAGTTACAAACCAAGAATTATCCTCCAAAGATATatatctaAAATGTTGTCCAGAATGTAGACTTAGTGCAACCAGAGCGAAGTTTGCACTTCCAAAACACATGTCAAAGTTGCGATTTTATTTTGGGTTTTCAACACCACGCATAGCAATGTTTGGTTCTGGTGTAGATTCAACAAGTTTTGTGAAAGATTTGATATCTAAGGAAACATCACcatttaaaattaaaggaatGTTCCCTGGTCAAGATGGTGTTGGTTCTGGCGTAACGCTTGAATATGCTGCTCAGGAAGTGAATTTCATGACCCTACATGGACTTACAAAGGCAGAGAGACTTCGACAAGATCCTGAAGGAGAAAGACGCAGTCGTTTGTTCTTCTATAATGATCTTGGTGAAATATCTTTAGTGCAGTCTgtaaaggaattaataaaaacagTAGATGCTTTGATATATGTTGTCAATACTTCAACAGACTGgaaagatacatATGGTCGCAAGGAATTTCTCGCAATGACAGATAAAAGATGGGTATCTTTACAAGTCCCAGTCCTTGTCTTGTGTATTTCACCAGATGATACAAGAAAACTCACACCGCCACTCTATGTTGCAGATAAATTAGACCTCTTGAGTTTGTCAAGACCTTGGCAGGTAAGATTGTGTGATATTGCCAACTTCAAAGGGCTTCTATCTGGTATGACTTggttaaacaaacaaataatggGACTATAGATGATGCGGTAAAGTTGCACTCCTAAACTCCAGGGTAGCTTTTAGAGGAAGCACAGTGTAAGGTGCTACAGATGACATGGAGAAGGTGATCAAATTGCACCGTCTCCGATCAGTTAATGAAAAATAGTCACATTAAAGGGCTATTAATACCTAGACTTAAATTATCTGCTAAACAAAAAAGAGTAATGAGAAGCAATCATTAATTCGTTTGTATTTTCAATAGCAAATAGTTACTGGTCtcaaacatgagatttcagaaaaagaaatgcTTTAAGAAAATTAGTATTTGCTTCTTGAATTAATGCAGCAAGTAAATAGCAATACTTCAGATAATactcaaaaaaacttttcgtTCGTGAGTGCTATATGAATTGCCCTAACATAAAACAGATAGGAAGAACAAACGTAGAATATTTTACTTCTAAACATGTTACGGTATTTACTTCGGAAAGCGAGATAGGAGGGGAAGTTCTTAACATTCGTGTTCGTTGTTTTGTCCTGATAATAACTCTCGATGACAAAAAGGTTTGATTTTCTGTAAAAGATGACAGATCTTAGAAAAGAGGAGGGGAAAGTTTCATTTGAGAAAATGCGGGGCAAAAGTGGCAGCACGCTATGTGAAGGCAGGGATATGTAAGAGAGTCGCACATAACCCTGGTTAAAGGAAAATACCTTCTGTCAATGTTTCTATTCCCTTGATACCAATTTATGTTAAATAGTTTTGtctttaatatatatttgacTTGTGAATATATTTATTCGTGTGGTATATGGTTAGTTACCACTACAttgtaaataatcaaattttgttaagaaaacttGTTTCGCAAGTGCTTTTTCTGTGTAGTATTGTACCTTTTTAAATAGTAAAGAACATTTGACGATCTGTAGCAAAA

Protein

Uniprot

Gene family

Uniprot term	Description
Q3T0J1	F-box only protein 4 OS=Bos taurus OX=9913 GN=FBXO4 PE=2 SV=1
Q8CHQ0	F-box only protein 4 OS=Mus musculus OX=10090 GN=Fbxo4 PE=1 SV=2
Q9UKT5	F-box only protein 4 OS=Homo sapiens OX=9606 GN=FBXO4 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00025	Arf	ADP-ribosylation factor family	Domain	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR039588	Family	F-box only protein 4	Interproscan
IPR006689	Family	Small GTPase superfamily, ARF/SAR type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16008	F-BOX ONLY PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10291	FBXO4; F-box protein 4	-	Ubiquitin system	ko04121	deepkoala