Gene detail

Detailed information of ENSODKP00000010235.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047122466.1, AP-3 complex subunit delta-1 isoform X1 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000011006

ATGCAGcTATGCGTATCAAAATTGAGACTACTGATAGAAGATCAGGATCAAAACTTAAAGTACCTGGGATTGCTACTCCTCAACAAAATATTAAAGTCCCAACCGAAAATGGTAGTGGGTCACAAAGATCTGATCCTTCAATGTCTGGATGATCGAGATGAATCTATTCGGTACCGTGCACTTGATTTAATTGTTGGGATGGTGTCCAAAAAGACCTTGTTCGATATTGTAAAGAAACTCATGGTACATATGGAGAAAGCTGAAGGAACTAATTATCGTGATGAGCTCTTGGCCAAAATCATTCAGATCTGTAGCCAGTCAAACTATCAGTTCATGACCAATTTTGAATGGTATATTGATGTCTTAATTCAACTAAGTGGTGTTGAAGGTACCAAGCATGGTAAACTGCTTGCAAATCAAATGTTGGATGTTGCTATTCGTGTTAAAGCTGTTCGGAAACATGCAGTACCGATTTTTGCCTCATTGTTGGGGCGGACGTCATTACTGACAGGGGCATCAGAAAAGAATACTTCATGTGAGATACTATTTGCAGCAAGCTGGGTTGCAGGAGAATATGCAGAATTTTTACCGGATATTCAAAACGTCATATCTTGCCTTGTTAACCCAAAAGTAACTTCACTACCCTCACACATTCAGTGTGTCTACATTCAAGCCATCGGAAAACTATTTTCAAGGGTATTAACAAGATCTGAAAGTGAGGATGGTGATGAAGAGGAAATAAATACCATGAGTGAGAACTTGATCTCCTCATTACCAGTGTTCACGAAGAGTTCCGATCTGGAGGTTCAAGATCGGtcatGTTGCATTTTACAACTGATCAAGCTAGTGACGAAAATGAAGAAAGAaggaATTAAATGTGCAGGAGATGTTAGCGCTTTGTTTGCAGAGGAATTGCTCCCAGTAGCACCAAAAGCTCAGAAAAAAGTAACAGTGCCAGAAGGACTGGATTTGGATAAATGGATCAATGAaccattatcagaagatgaaagtGATACTGATGATAACAAATCATTCTTCATGGATGATAAAACGCCAACATTAAgctATCAAACGAATCGTGAAAAACATGAACCTGATGAGGAAGAACTAGAAAAGGCCCGGGAAATTCGTCGAATGTTTCAAGAGAGTAATCCATACTATGTGAAAGGATCCACCACAAGCAAGAAGCCTGAAAGCAGTCAACAAGAAGAGGTCAGCAACATCCCTGTAAAACCATTAGACTTGTCTGTCTCTTTGAAAGTAGAAGGAGGAggcaaaaaacagaaaaacaagagAAAAGGAAAGAAAGGTAAAAAGGGTCACAAAGCAAGTGAAAGCGAGGAAGAGGTACCATACCCATCATATGAAGTAACACCTGTAGTCGATCTAGGTGGTGAAGATGTTGCAGATGCCCCCTCTACCAATGATCCTCACAGTTTCTTGAATATCGACCTTGACACACCGCTAGGAGATCATGAAGTTTTGCCCGTGCAAACACACAGAGTGGTGTCAGACAAAGCAGAACAATCAACAGTGACAGAAAAGaaatcaaaaaaggagaaaaagaagaCGAAAGATGGACAGAAAAAGCATCGAACGAAAAGTAAAGATCAAGATGCAACAAAAATCAAAGTCGAAACAGAGGCGGATGGAgggaaaaagaaagagaaatccaagaaaaataagaaaaaattatctggcaaagATTCGAAAGAAGAAACTGACGCAGAACGCAAAGCTACTCTCTTGAAGTTAGCGGCGCAAGCtgctgaaaacaaaaaagatgaagaagatgaaaagGATAAAGAAATGGATTTCTGGTTGTCACCCACCACTGAAACTAAGGAAgaaccaaaaataatagatGAAATGAAAGAGCAACTGAAAGAGTCACAAGAAAATGCCCCTGAAGTTCAGAAAACAGAGAAGaaaccgaaaaaagttgcaaaatcaaaatctacaaaacagaataagaaaaagaaaaaaattaaagaaagtaacgAAGAGTTATCTACTAAAGAAACTACAACCGCAGAACTCCCTGATGTCATGATAATGGATTTAGAGGGATCTCAAATAGATCCATTTGCAAGTTACAAACCACTGTGCGaagattcaaatataaaaataGTGTACGAGATAAAGGCAGATCcgatacaaaataaacaaattatagcGTCCATAATATTCAAGAACCAAACCTCGCATCATATTCAAAAATTAGAATTCAATGTTCTGGACTCTTTAAACATGAAATTAGTACGCCAGATTGGTGCATCATCACATGACCCTGTTTTGGTTCCTTTCCAATTGCTTCCAGATATGGAAAATGAAGGTCAGTTTCTATTTACTGTCGAAAGCATCGTCGTGGCGCAATTCCTGCGTGGAACGCTTACATACATTGTCAAATCAAGAATATACTTCCCTCCTTGCATCAGGggaattgaaagaaaaacaatcagCCAAGGTGGCAGTTAG

Transcript

ENSODKT00000011006

ATCTGCAAGCGACATCAAAAAATGTCGTCAAGAACGCGAATTCGTAATGGCagctaaaaaaatgttagaaagccAAACTAATAGAGTAATCAATGGTCATATTAACAACAACAACCATGGTCATACTACAAACGGATCTCGCACAAAGTTTGAAAATCCTGAGTTAAAGTTCTGTATTACTGGAATAAGgtCTTCCAGATCATCAGCCATCGATGCAGcTATGCGTATCAAAATTGAGACTACTGATAGAAGATCAGGATCAAAACTTAAAGTACCTGGGATTGCTACTCCTCAACAAAATATTAAAGTCCCAACCGAAAATGGTAGTGGGTCACAAAGATCTGATCCTTCAATGTCTGGATGATCGAGATGAATCTATTCGGTACCGTGCACTTGATTTAATTGTTGGGATGGTGTCCAAAAAGACCTTGTTCGATATTGTAAAGAAACTCATGGTACATATGGAGAAAGCTGAAGGAACTAATTATCGTGATGAGCTCTTGGCCAAAATCATTCAGATCTGTAGCCAGTCAAACTATCAGTTCATGACCAATTTTGAATGGTATATTGATGTCTTAATTCAACTAAGTGGTGTTGAAGGTACCAAGCATGGTAAACTGCTTGCAAATCAAATGTTGGATGTTGCTATTCGTGTTAAAGCTGTTCGGAAACATGCAGTACCGATTTTTGCCTCATTGTTGGGGCGGACGTCATTACTGACAGGGGCATCAGAAAAGAATACTTCATGTGAGATACTATTTGCAGCAAGCTGGGTTGCAGGAGAATATGCAGAATTTTTACCGGATATTCAAAACGTCATATCTTGCCTTGTTAACCCAAAAGTAACTTCACTACCCTCACACATTCAGTGTGTCTACATTCAAGCCATCGGAAAACTATTTTCAAGGGTATTAACAAGATCTGAAAGTGAGGATGGTGATGAAGAGGAAATAAATACCATGAGTGAGAACTTGATCTCCTCATTACCAGTGTTCACGAAGAGTTCCGATCTGGAGGTTCAAGATCGGtcatGTTGCATTTTACAACTGATCAAGCTAGTGACGAAAATGAAGAAAGAaggaATTAAATGTGCAGGAGATGTTAGCGCTTTGTTTGCAGAGGAATTGCTCCCAGTAGCACCAAAAGCTCAGAAAAAAGTAACAGTGCCAGAAGGACTGGATTTGGATAAATGGATCAATGAaccattatcagaagatgaaagtGATACTGATGATAACAAATCATTCTTCATGGATGATAAAACGCCAACATTAAgctATCAAACGAATCGTGAAAAACATGAACCTGATGAGGAAGAACTAGAAAAGGCCCGGGAAATTCGTCGAATGTTTCAAGAGAGTAATCCATACTATGTGAAAGGATCCACCACAAGCAAGAAGCCTGAAAGCAGTCAACAAGAAGAGGTCAGCAACATCCCTGTAAAACCATTAGACTTGTCTGTCTCTTTGAAAGTAGAAGGAGGAggcaaaaaacagaaaaacaagagAAAAGGAAAGAAAGGTAAAAAGGGTCACAAAGCAAGTGAAAGCGAGGAAGAGGTACCATACCCATCATATGAAGTAACACCTGTAGTCGATCTAGGTGGTGAAGATGTTGCAGATGCCCCCTCTACCAATGATCCTCACAGTTTCTTGAATATCGACCTTGACACACCGCTAGGAGATCATGAAGTTTTGCCCGTGCAAACACACAGAGTGGTGTCAGACAAAGCAGAACAATCAACAGTGACAGAAAAGaaatcaaaaaaggagaaaaagaagaCGAAAGATGGACAGAAAAAGCATCGAACGAAAAGTAAAGATCAAGATGCAACAAAAATCAAAGTCGAAACAGAGGCGGATGGAgggaaaaagaaagagaaatccaagaaaaataagaaaaaattatctggcaaagATTCGAAAGAAGAAACTGACGCAGAACGCAAAGCTACTCTCTTGAAGTTAGCGGCGCAAGCtgctgaaaacaaaaaagatgaagaagatgaaaagGATAAAGAAATGGATTTCTGGTTGTCACCCACCACTGAAACTAAGGAAgaaccaaaaataatagatGAAATGAAAGAGCAACTGAAAGAGTCACAAGAAAATGCCCCTGAAGTTCAGAAAACAGAGAAGaaaccgaaaaaagttgcaaaatcaaaatctacaaaacagaataagaaaaagaaaaaaattaaagaaagtaacgAAGAGTTATCTACTAAAGAAACTACAACCGCAGAACTCCCTGATGTCATGATAATGGATTTAGAGGGATCTCAAATAGATCCATTTGCAAGTTACAAACCACTGTGCGaagattcaaatataaaaataGTGTACGAGATAAAGGCAGATCcgatacaaaataaacaaattatagcGTCCATAATATTCAAGAACCAAACCTCGCATCATATTCAAAAATTAGAATTCAATGTTCTGGACTCTTTAAACATGAAATTAGTACGCCAGATTGGTGCATCATCACATGACCCTGTTTTGGTTCCTTTCCAATTGCTTCCAGATATGGAAAATGAAGGTCAGTTTCTATTTACTGTCGAAAGCATCGTCGTGGCGCAATTCCTGCGTGGAACGCTTACATACATTGTCAAATCAAGAATATACTTCCCTCCTTGCATCAGGggaattgaaagaaaaacaatcagCCAAGGTGGCAGTTAGTGAAGACCTCCAGCTAAATGAAACAATACAAAATCTGtgccaaaaaatgaatttagcag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q865S1	AP-3 complex subunit delta-1 OS=Bos taurus OX=9913 GN=AP3D1 PE=1 SV=2
O14617	AP-3 complex subunit delta-1 OS=Homo sapiens OX=9606 GN=AP3D1 PE=1 SV=1
O54774	AP-3 complex subunit delta-1 OS=Mus musculus OX=10090 GN=Ap3d1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003931 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06375 all species →	AP3D1	AP-3 complex subunit delta-1	Family	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR010474 all species →	Domain	AP-3 complex subunit delta domain, metazoa	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR017105 all species →	Family	Adaptor protein complex AP-3, delta subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22781 all species →	DELTA ADAPTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0010008 all species →	Cellular Component	endosome membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000010235.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.