Gene detail

Detailed information of ENSODKP00000010990.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_028390627.1, DNA excision repair protein ERCC-6-like 2 isoform X3 [Dendronephthya gigantea]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000011853

ATGGAGCAAGATTCAGCGTATGATAAATACATGAGTGAGAAGTATGCAGACTCAAGTGATGAAGAAAAAGGGAAAAcagATCAAAACATTGCGATGTGGAATAGACCGTTCAGACTGAAGAAAAGGGCTACCAAAACCAGATCTCCTGTGAAATCAGGGTGCTCAAAAAGTCATGataccAATGATTCGGAAGAGAGACCATGCCTGAGTCAAGTACCTTCATGTGAGAAGCAAGACTGTATATTGTCACCTAATGTGAAGGTCCCAGGTTTGATAAACCAATACCTTCGAAATTATCAGCGCGATGGAATCAagtttctatttaaaaaatatagagaaaatacaGGCTGCATTTTGGCTGATGATATGGGCTTGGGGAAGACCATTCAAGTAATCGGATTCCTTGCATCATTATTGGGAAAGACAGGTGTCAAGCAACAGGATATCGCAAAGAAGacAAAGTATGTGTTTCTAATCGTTTCACCAACCTCGGTCCTCTACAACTGGTTAGACGAATTGGAGGTCTGGGGCTACTTTAAAGTCGGCAAATTTCATAGAAACAGCAAGGAAGAGGTTATAGATTTAGTGAAACAAAAGCAGGTAGAATTAGTGCTCACGACACACGAAACCATGAGAATTTATGTCGACATATTAAATCAGATACCCTGGTCAGCAGTGATATTCGATGAGGCGCATCGTATTAAAGGCGTAGACGCTCAAGTGACAGTTGCTGCGAAAGAGTTGAAAACTAAATGCAGAATAGGCCTCACTGGAACACCACTGCAGAATCAATTAAAGGAATTCTGGTGTTTACTGGATTGGGCTAACCCAGGATGTTTGGGATCGTATGAGGAATTCGATCAGAATTTTGCCCAACCTATTTATTTCGGACAAAGGTTTACCGCAACAAAGAGAGAACTAGCGACTGCAAGGAAAAAGCAACAGGAATTAACTTTACTTCACAAGAGGTGGCTACTCAGACGAACAAAAGATATGATAGCAGACCAGCTTCCTGAGAAAGATGAAAAGatcgttttttgtaaattatcacCGATACAAGTTGCAATTTATCAAGAGATACTGAAACAACCTAAAGTAAAAATGCTGGTGGGGCTCGATGTACATTGCAAATGTGGTAGCGACATTATTGCAAGGAAATGTTGCATGAAGTCATTCAACTGGCGACGTTGGTTGTTTCCTTACATGCATTTGCTTCTGAAGATTTCCAATCACGCAGGTTTATTGTTACCACATCATAGTCAAAGTGAAGAACAAAAAATACTGGCTAAAGAATTATGCGCATGCTTATTTAAACGCTATCCTATCCTTGAAGACGTATGTACAAAGCGAAAACTGTCACAGATATCAAACCCAATGTTTTGTGGGAAGATGGAGGTGCTACAGAAGTTATtaacagttttacaaaagaaaaaagataaagtgCTGATATTTTCCCATTCCACTCAACTATTAAACATCCTTGAAGCATATATGATAAGCCGTGGTATGCTATATCGTCGTTTGGATGGTTCAACAAACGTTTCGCATAGGAATATCatagttaaagaatttaataaagatccTTCCATATTTGTCTGCTTAATTTCAACAACTGCAGGATCACTTGGTTTAAATTTTGTTGGTGCAAATGTGGTGATAATATTTGACCCAATGTGGAACCCGACTTACGACCAACAAGCCCAAGATCGTGCATATCGAATAGGTCAACAGCGGAATGTGCATGTGTATCGATTAATAAGTATAGGTAGCatagaagaaaatatatatatgagaCAAATTTACAAACAAcaaCTCGCGAAGATTgcagttgaaaaatcaaatgagCGTCGGTATTTTGCAGGTATGCCAAGCAATAGTCGTTGCCATGGTGAATTATTTGGAATTTCAAACATGTTTAAATTCAATGCAGATCACACTAGTATATTCGCGAAAGAAGTATTCGAAAAGATCAAACAAATAGAGAACGATGTGGTTGTAGCGAAGTATGAAGCACCCAGTAAAAAGGACAATAAAGAGAAGGATCCCAAAGGTTTATTTAATTTACAAGAAGGAGATTCCCCTGCAGATATTGATGATGATTCCGATAGTGATCTGATCGATTCAGTTTTAAATGACTCCCTCAGCCAAGAATTAGAGAGTAGTAAAACTTTAGAAGAacgtgaaaataacaaagataaagTTGAGAAGGAACCAGAAAGCAACATGAATAatcactttgaaaatatattagGTATGTGTGGTGTGCAGTACGCTCATTCAACCAAATCTGTTGTTGGGTCAGATCAACACGAGGAAAAAATGTCCCGCACAGCTATAAGAGATGTATTCTGGAATGGAGTGCACTCGCAACAACTGGCCaatgaagacaatgaaaatttaGCTAATGGAGACAATGATTCTCTAgaaGAAATTGAGTCGCAGAGAGAAAccgaatcaaataaaaataaaagtcgaTCCATCTCTGTTAAACCAACCATGCACATTCATGGTGGTATATTTGAAAGGATTGACTCTAATATGTATATAATTGGTTCAACACCACGAACTGTCAAAGATCGACAGTTTCAACAAATGGCAGAGATGAAAGGATACTCAAACATAAAAGATTTTGCCTCATATATTTTGGCAAGTAATCCTAGTGAATggaaaaatatcctaaaaaattattatattgtaACAGAACCAGAATGTAAAAAAATACCCACGTTTTCCAAGATTTATAACGTgggaaacaaaatattaagacAGGATAAACATGtcacaataaatcaaaaaagaaagattgatcggctgaaaaaagctaaaaatacttttaaatatacaGCTAAAACAAGGACGTTTAATACAATTACATACGATACCGATGATGAAATAAGTGATAGTAGTGACCTGGCAATGAAAACTGAAACAATTACCaagactaaaaaaaagaaaataaaaaataaaaaccgtAAACCTTTACAGTCTTTTATTATCAGTAGCAGTGAAAGTGAATTTGAAAGTGCAGAGGgaaaaaacttgacaaaatttaacaaaagaaataatttgaaaaattgtccAAAACCGATAACAAAGAGACAAGTAGATGTGTGTCCTATTAATGATATGCCTCCCAAACAAAAACCAAAGCTTGATTTAACAATTACGAAATCATCACAACAAGAAAAAGAGACGTCCTCAACAGACACTCACGAAGAGATCACTAACATTCTGGACACTAATTCTGATgtattgaaatatgaaaataatgataatgatcgaACGTTAGGACACAAACCAGTAGCAATTTCAGCACCTTCAAAACGGAAGCCATATTCAGTGTTGGACGAACTTCTTTCCTCGCAAAATCAGATGGCTGAAGAGATTTCTGTAAGTTCTCCGTCAAAACCTGAAACAGATTACATTAAATTAACTAAACCCAACGCTGAATTATCTCCATGTACTATTATCTTATCGAGAAATGCTCCACCAAAGAAGAAAAGTACTAATTACAAATTCTCAGTGTTAGATTCTTTACTAGATGATAGCTGTGTAGATGAACAAACAGCTGCTGCAACAAACAAGCAGGCACTTGAAATTTCAACTGAGCAACATCTAGCAATACTGGCAACAAAAATGACACCTCTAACCTTCCTGCATTACCATCTCTTAGATTCATTATTGAGGAGGATAGTGTGGACAGCAGTGGATGAGAGCCAAATATTGCCTTAG

Transcript

ENSODKT00000011853

ATATgggaaagaaaaggaaatataCAAAAACGAAccaaatggaaagaaaaatatttcataaagctCAAGTTGTGCCGTAATACTGCACCAGATTTTATTAAGTGGTGAGAAGTCGGGTAAGATAAAGGTTCAAGATGGAGCAAGATTCAGCGTATGATAAATACATGAGTGAGAAGTATGCAGACTCAAGTGATGAAGAAAAAGGGAAAAcagATCAAAACATTGCGATGTGGAATAGACCGTTCAGACTGAAGAAAAGGGCTACCAAAACCAGATCTCCTGTGAAATCAGGGTGCTCAAAAAGTCATGataccAATGATTCGGAAGAGAGACCATGCCTGAGTCAAGTACCTTCATGTGAGAAGCAAGACTGTATATTGTCACCTAATGTGAAGGTCCCAGGTTTGATAAACCAATACCTTCGAAATTATCAGCGCGATGGAATCAagtttctatttaaaaaatatagagaaaatacaGGCTGCATTTTGGCTGATGATATGGGCTTGGGGAAGACCATTCAAGTAATCGGATTCCTTGCATCATTATTGGGAAAGACAGGTGTCAAGCAACAGGATATCGCAAAGAAGacAAAGTATGTGTTTCTAATCGTTTCACCAACCTCGGTCCTCTACAACTGGTTAGACGAATTGGAGGTCTGGGGCTACTTTAAAGTCGGCAAATTTCATAGAAACAGCAAGGAAGAGGTTATAGATTTAGTGAAACAAAAGCAGGTAGAATTAGTGCTCACGACACACGAAACCATGAGAATTTATGTCGACATATTAAATCAGATACCCTGGTCAGCAGTGATATTCGATGAGGCGCATCGTATTAAAGGCGTAGACGCTCAAGTGACAGTTGCTGCGAAAGAGTTGAAAACTAAATGCAGAATAGGCCTCACTGGAACACCACTGCAGAATCAATTAAAGGAATTCTGGTGTTTACTGGATTGGGCTAACCCAGGATGTTTGGGATCGTATGAGGAATTCGATCAGAATTTTGCCCAACCTATTTATTTCGGACAAAGGTTTACCGCAACAAAGAGAGAACTAGCGACTGCAAGGAAAAAGCAACAGGAATTAACTTTACTTCACAAGAGGTGGCTACTCAGACGAACAAAAGATATGATAGCAGACCAGCTTCCTGAGAAAGATGAAAAGatcgttttttgtaaattatcacCGATACAAGTTGCAATTTATCAAGAGATACTGAAACAACCTAAAGTAAAAATGCTGGTGGGGCTCGATGTACATTGCAAATGTGGTAGCGACATTATTGCAAGGAAATGTTGCATGAAGTCATTCAACTGGCGACGTTGGTTGTTTCCTTACATGCATTTGCTTCTGAAGATTTCCAATCACGCAGGTTTATTGTTACCACATCATAGTCAAAGTGAAGAACAAAAAATACTGGCTAAAGAATTATGCGCATGCTTATTTAAACGCTATCCTATCCTTGAAGACGTATGTACAAAGCGAAAACTGTCACAGATATCAAACCCAATGTTTTGTGGGAAGATGGAGGTGCTACAGAAGTTATtaacagttttacaaaagaaaaaagataaagtgCTGATATTTTCCCATTCCACTCAACTATTAAACATCCTTGAAGCATATATGATAAGCCGTGGTATGCTATATCGTCGTTTGGATGGTTCAACAAACGTTTCGCATAGGAATATCatagttaaagaatttaataaagatccTTCCATATTTGTCTGCTTAATTTCAACAACTGCAGGATCACTTGGTTTAAATTTTGTTGGTGCAAATGTGGTGATAATATTTGACCCAATGTGGAACCCGACTTACGACCAACAAGCCCAAGATCGTGCATATCGAATAGGTCAACAGCGGAATGTGCATGTGTATCGATTAATAAGTATAGGTAGCatagaagaaaatatatatatgagaCAAATTTACAAACAAcaaCTCGCGAAGATTgcagttgaaaaatcaaatgagCGTCGGTATTTTGCAGGTATGCCAAGCAATAGTCGTTGCCATGGTGAATTATTTGGAATTTCAAACATGTTTAAATTCAATGCAGATCACACTAGTATATTCGCGAAAGAAGTATTCGAAAAGATCAAACAAATAGAGAACGATGTGGTTGTAGCGAAGTATGAAGCACCCAGTAAAAAGGACAATAAAGAGAAGGATCCCAAAGGTTTATTTAATTTACAAGAAGGAGATTCCCCTGCAGATATTGATGATGATTCCGATAGTGATCTGATCGATTCAGTTTTAAATGACTCCCTCAGCCAAGAATTAGAGAGTAGTAAAACTTTAGAAGAacgtgaaaataacaaagataaagTTGAGAAGGAACCAGAAAGCAACATGAATAatcactttgaaaatatattagGTATGTGTGGTGTGCAGTACGCTCATTCAACCAAATCTGTTGTTGGGTCAGATCAACACGAGGAAAAAATGTCCCGCACAGCTATAAGAGATGTATTCTGGAATGGAGTGCACTCGCAACAACTGGCCaatgaagacaatgaaaatttaGCTAATGGAGACAATGATTCTCTAgaaGAAATTGAGTCGCAGAGAGAAAccgaatcaaataaaaataaaagtcgaTCCATCTCTGTTAAACCAACCATGCACATTCATGGTGGTATATTTGAAAGGATTGACTCTAATATGTATATAATTGGTTCAACACCACGAACTGTCAAAGATCGACAGTTTCAACAAATGGCAGAGATGAAAGGATACTCAAACATAAAAGATTTTGCCTCATATATTTTGGCAAGTAATCCTAGTGAATggaaaaatatcctaaaaaattattatattgtaACAGAACCAGAATGTAAAAAAATACCCACGTTTTCCAAGATTTATAACGTgggaaacaaaatattaagacAGGATAAACATGtcacaataaatcaaaaaagaaagattgatcggctgaaaaaagctaaaaatacttttaaatatacaGCTAAAACAAGGACGTTTAATACAATTACATACGATACCGATGATGAAATAAGTGATAGTAGTGACCTGGCAATGAAAACTGAAACAATTACCaagactaaaaaaaagaaaataaaaaataaaaaccgtAAACCTTTACAGTCTTTTATTATCAGTAGCAGTGAAAGTGAATTTGAAAGTGCAGAGGgaaaaaacttgacaaaatttaacaaaagaaataatttgaaaaattgtccAAAACCGATAACAAAGAGACAAGTAGATGTGTGTCCTATTAATGATATGCCTCCCAAACAAAAACCAAAGCTTGATTTAACAATTACGAAATCATCACAACAAGAAAAAGAGACGTCCTCAACAGACACTCACGAAGAGATCACTAACATTCTGGACACTAATTCTGATgtattgaaatatgaaaataatgataatgatcgaACGTTAGGACACAAACCAGTAGCAATTTCAGCACCTTCAAAACGGAAGCCATATTCAGTGTTGGACGAACTTCTTTCCTCGCAAAATCAGATGGCTGAAGAGATTTCTGTAAGTTCTCCGTCAAAACCTGAAACAGATTACATTAAATTAACTAAACCCAACGCTGAATTATCTCCATGTACTATTATCTTATCGAGAAATGCTCCACCAAAGAAGAAAAGTACTAATTACAAATTCTCAGTGTTAGATTCTTTACTAGATGATAGCTGTGTAGATGAACAAACAGCTGCTGCAACAAACAAGCAGGCACTTGAAATTTCAACTGAGCAACATCTAGCAATACTGGCAACAAAAATGACACCTCTAACCTTCCTGCATTACCATCTCTTAGATTCATTATTGAGGAGGATAGTGTGGACAGCAGTGGATGAGAGCCAAATATTGCCTTAGAGCCCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5T890	DNA excision repair protein ERCC-6-like 2 OS=Homo sapiens OX=9606 GN=ERCC6L2 PE=1 SV=3
A3KMX0	DNA excision repair protein ERCC-6-like 2 OS=Bos taurus OX=9913 GN=ERCC6L2 PE=2 SV=4
Q9JIM3	DNA excision repair protein ERCC-6-like 2 OS=Mus musculus OX=10090 GN=Ercc6l2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002555 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14773 all species →	VIGSSK	Helicase-associated putative binding domain, C-terminal	Family	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00176 all species →	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029256 all species →	Domain	Helicase-associated putative binding domain	Interproscan
IPR049730 all species →	Domain	SNF2/RAD5-like, C-terminal helicase domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038718 all species →	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR002464 all species →	Conserved_site	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR050496 all species →	Family	SNF2/RAD54 Helicase and DNA Repair	Interproscan
IPR000330 all species →	Domain	SNF2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45629 all species →	SNF2/RAD54 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140658 all species →	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000010990.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.