Gene detail

Detailed information of ENSODKP00000012778.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_012556830.2, probable RNA helicase SDE3 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000014023

ATGGTGTTGCAGCCATTGGATGAAACGAAGCTTTATATTGATTTTAAACCGAGgatTTTAGGTAAAGCCAATGTCATTATGGTTTGTGCTTTTGTGGGATTTAAAGTTGAAGTGGTTATTACAGCAAATGTCACTAACAATCTTGAAAGAGATGTATGCACAGTAAACCCCAAGTTGAAGCAAGAACCAGCTTTTTTGGGGAAGAAAATTAAGACAAGTCTCGTAGACATGGCAGATGTTATACCTGGAGAGCGTCTAATCCAcaAAAAAACAATATCCCTTCCAAAGAAGTTAGCAAAGTATCCCATACCATCGTATTTGAGAGAAATGGTTTTACATTGTGCAGATGATTGTGAGTCCACAGTTCCTGAGTTAGGTCAGccATTGGACATCAGGAATTATAGACGAAAATTGGAAACATTACTGCACATAGAAGAACTACAAAATCATGTTGAAATGAGGCAGTACAATCAAGCATCTGTGTTTCTACGACAGAAAGGTGAGTTTTTATCATTGGAGGTTCCAGGTTTAGCAGAAGGTCGACCATCTCTATTGTTAGGTGACAGAGTTGTTGTTTCACTGCACAgcAGCTCTTCCCAGAGACCAAGATATGAGGGTTACATTCACGAGATACATGCAGAGGAGATATTTCTAAAGTTTAATGTGACATTCCACAATTTATATTCAAACGATGCAGTAGATGTTGAATTTCAAATTAATAGaactccGTTCAGACGGGCCCACCAAGCTGTTGAACATGCCATCAATTTGGGAGAAGAAGtttTATTCCCAAAGATTATCACACCAAAAGATCCCTTGGTAGATGCATTGCAAGCCCCATTGCAGCTATTCAGTTCTATGTTAAATGAAAGGCAGCAGACTGCAGTCCAACATATATTAGAAGCACGAGGGCGTCCAGTACCATACATACTATTTGGTCCTCCTGGAACTGGGAAAAGTGTCGTTATTGTGGAAGCTATCCTgcagatttttaaatgtataGATTCCAGTCGTGTATTAATTTGTGCACCATCAAATTCAGCTGCTGATCTTCTTgcagaaagactccatcatagtggtatcataaaaaaacatgatatggTGCGGCTGAATGCATTTCAACGTTCAACTTTGAACCTTCCAGAGTGTATTGAACAATATTGCTCAAATGATGTTGGCAATTTACAATTCTTAGCACGTCATCGAATTTTTATTGCCACATGTAATATGGCAGGTTTTTTGTATTCATTGGACTTGAAAGTTGGTCATTTTACACATATATTTGTTGACGAGGCTGGTCAAGCAACAGAGCCAGAGTGTTTAATACCAATTGGTTTTGCAGCTGGCACAGAAGAATCCCAGgtaGTTCTTGCTGGTGATCCTCATCAACTTGGTCCAGTGTTACGATCCTCTTTGGCTGAAGAATTCGGgcttaatatatcttttttggAAAGGTTGTCTTTATCAAAGCTTTATGAGCGTGATGAAGTTTCATATGCAAGTTCTGGTTATTATAATCCACAGGTAGCTACAAAACTGCTCAAGAATTACAGGTCCCATAAAGATTTGCTGAAATTGCCATCAACAATATTTTATGACAGTGAATTGGTTTCTTGTGCCAACAAAAAACTGGTTGATGTATTTATGGGAAGTAGTATTTTACCAAACCCAAATATTCCTCTCATACTACATGGTCTTCGGAGTGATGATTTGCGTGAGGGAACAAGCCCCTCTTGGTTTAACCCAATGGAAGCAGTACAAGTGGTCAAGTACGTACAAGCTATTCTTAGTCTTTTCAGAGAAAATATCACAGTGGATGACATAGGAATTGTAACACCTTATCGGAAACAGGTAGAGAAAATACGTCTACTGTTGGAACAGTTCTTCTTGGTAGGTATAAAAGTTGGATCAGTAGAAGAATTTCAAGGTCAAGAGAGGCGATGTATCATTCTGTCGGCAGTGCGCTCGAATGAAATGTTTGTTGGTTATGATTCTCACCATAACATTGGATTTTTAAGAAATGCCAAACGATTTAATGTATCAATCACAAGATCACAAGCTTTGCTGATAGTTGTTGGGAATCCAGTTGTTTTATGTTATGATCCGTATTGGTGTGCTTTGCTTCAATATGCTGTGATGAACAACTGTTACACTGGATGTGATCTCCCCAAACTACAGAAGGAAGTTATCCAAgaaaattttaagaaagccATTCAACTTTTATCTCTACTACCAAATTCCGAATCTAATATTGTTGACAGACATGATATGATGGAGCAGTAA

Transcript

ENSODKT00000014023

TAATGgaaatgtttattttacattcACCTCAGTTGAGAAAGGATATAGATTAAAACAGGGAGACCATGTCATTGCTTTAGTGCTTGAGTCAAAACAAGTGAGAGGAGAATGGCGAGCAAATTATGTTATTAGGAAAAGCAAAGGAAAAGTCCAGAACAGTGGAGTTAGAGCTAGTAAAAACTTTGAAGACAATAGTCATTTTGTTCCAACATTTGATAATTGCGGTATTGAGATATTGGGAGAGGCAAATTTTGGTGATGTTTTGGTTGATCAAACATGTAAAGCAGAGTTTTTAGTCAGGAACTCAAGTGAAACAGAGGTTGTGTTCAAGGATATCAAGTTAATTGGTAAGAATGCAGACAGCTTCATTTATAGGCTGGGACCAAgctcaaaaatactgaaaagtaaaGATGTATCTAcggaaattttgaaagaagaacaGAACGTTTTACAAGgaTATTTGATGGTGTTGCAGCCATTGGATGAAACGAAGCTTTATATTGATTTTAAACCGAGgatTTTAGGTAAAGCCAATGTCATTATGGTTTGTGCTTTTGTGGGATTTAAAGTTGAAGTGGTTATTACAGCAAATGTCACTAACAATCTTGAAAGAGATGTATGCACAGTAAACCCCAAGTTGAAGCAAGAACCAGCTTTTTTGGGGAAGAAAATTAAGACAAGTCTCGTAGACATGGCAGATGTTATACCTGGAGAGCGTCTAATCCAcaAAAAAACAATATCCCTTCCAAAGAAGTTAGCAAAGTATCCCATACCATCGTATTTGAGAGAAATGGTTTTACATTGTGCAGATGATTGTGAGTCCACAGTTCCTGAGTTAGGTCAGccATTGGACATCAGGAATTATAGACGAAAATTGGAAACATTACTGCACATAGAAGAACTACAAAATCATGTTGAAATGAGGCAGTACAATCAAGCATCTGTGTTTCTACGACAGAAAGGTGAGTTTTTATCATTGGAGGTTCCAGGTTTAGCAGAAGGTCGACCATCTCTATTGTTAGGTGACAGAGTTGTTGTTTCACTGCACAgcAGCTCTTCCCAGAGACCAAGATATGAGGGTTACATTCACGAGATACATGCAGAGGAGATATTTCTAAAGTTTAATGTGACATTCCACAATTTATATTCAAACGATGCAGTAGATGTTGAATTTCAAATTAATAGaactccGTTCAGACGGGCCCACCAAGCTGTTGAACATGCCATCAATTTGGGAGAAGAAGtttTATTCCCAAAGATTATCACACCAAAAGATCCCTTGGTAGATGCATTGCAAGCCCCATTGCAGCTATTCAGTTCTATGTTAAATGAAAGGCAGCAGACTGCAGTCCAACATATATTAGAAGCACGAGGGCGTCCAGTACCATACATACTATTTGGTCCTCCTGGAACTGGGAAAAGTGTCGTTATTGTGGAAGCTATCCTgcagatttttaaatgtataGATTCCAGTCGTGTATTAATTTGTGCACCATCAAATTCAGCTGCTGATCTTCTTgcagaaagactccatcatagtggtatcataaaaaaacatgatatggTGCGGCTGAATGCATTTCAACGTTCAACTTTGAACCTTCCAGAGTGTATTGAACAATATTGCTCAAATGATGTTGGCAATTTACAATTCTTAGCACGTCATCGAATTTTTATTGCCACATGTAATATGGCAGGTTTTTTGTATTCATTGGACTTGAAAGTTGGTCATTTTACACATATATTTGTTGACGAGGCTGGTCAAGCAACAGAGCCAGAGTGTTTAATACCAATTGGTTTTGCAGCTGGCACAGAAGAATCCCAGgtaGTTCTTGCTGGTGATCCTCATCAACTTGGTCCAGTGTTACGATCCTCTTTGGCTGAAGAATTCGGgcttaatatatcttttttggAAAGGTTGTCTTTATCAAAGCTTTATGAGCGTGATGAAGTTTCATATGCAAGTTCTGGTTATTATAATCCACAGGTAGCTACAAAACTGCTCAAGAATTACAGGTCCCATAAAGATTTGCTGAAATTGCCATCAACAATATTTTATGACAGTGAATTGGTTTCTTGTGCCAACAAAAAACTGGTTGATGTATTTATGGGAAGTAGTATTTTACCAAACCCAAATATTCCTCTCATACTACATGGTCTTCGGAGTGATGATTTGCGTGAGGGAACAAGCCCCTCTTGGTTTAACCCAATGGAAGCAGTACAAGTGGTCAAGTACGTACAAGCTATTCTTAGTCTTTTCAGAGAAAATATCACAGTGGATGACATAGGAATTGTAACACCTTATCGGAAACAGGTAGAGAAAATACGTCTACTGTTGGAACAGTTCTTCTTGGTAGGTATAAAAGTTGGATCAGTAGAAGAATTTCAAGGTCAAGAGAGGCGATGTATCATTCTGTCGGCAGTGCGCTCGAATGAAATGTTTGTTGGTTATGATTCTCACCATAACATTGGATTTTTAAGAAATGCCAAACGATTTAATGTATCAATCACAAGATCACAAGCTTTGCTGATAGTTGTTGGGAATCCAGTTGTTTTATGTTATGATCCGTATTGGTGTGCTTTGCTTCAATATGCTGTGATGAACAACTGTTACACTGGATGTGATCTCCCCAAACTACAGAAGGAAGTTATCCAAgaaaattttaagaaagccATTCAACTTTTATCTCTACTACCAAATTCCGAATCTAATATTGTTGACAGACATGATATGATGGAGCAGTAAGAGGCGAATGATAAAAGTCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BXT6	RNA helicase Mov10l1 OS=Homo sapiens OX=9606 GN=MOV10L1 PE=1 SV=1
Q99MV5	RNA helicase Mov10l1 OS=Mus musculus OX=10090 GN=Mov10l1 PE=1 SV=1
Q8GYD9	Probable RNA helicase SDE3 OS=Arabidopsis thaliana OX=3702 GN=SDE3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000828 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13087 all species →	AAA_12	AAA domain	Domain	Interproscan
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan
PF21634 all species →	MOV-10_beta-barrel	Helicase MOV-10, beta-barrel domain	Domain	Interproscan
PF21635 all species →	Mov-10_helical	Helicase MOV-10, helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR047187 all species →	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR041679 all species →	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR049080 all species →	Domain	Helicase MOV-10-like, beta-barrel domain	Interproscan
IPR049079 all species →	Domain	Helicase MOV-10, helical domain	Interproscan
IPR045055 all species →	Family	DNA2/NAM7-like helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887 all species →	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0035194 all species →	Biological Process	regulatory ncRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0043186 all species →	Cellular Component	P granule	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000012778.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.