Gene detail

Detailed information of ENSODKP00000014041.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047122840.1, mRNA-decapping enzyme 1A isoform X2 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000015586

AGTAACCATCATGGCCGACGTATCTGGTAAGTCGGAAgctgaaatgaaaattaatttatcaGCTTTAAAGAAGCATGACcctgaaattgatgaaattattgacacAGCATCTGGAGTGGCACACTACAAATTTCGATCCGATTCAGGCGTCTGGGAAAAGACCGACGTTGAAGGCTCACTGTTTCTTTACTCAAGGAAAGTTTCACCTTACATTATTGTCTTTATCATGAATCGATTAAACAAAGAGAATACAAGTTTACCAGTTACACAACATATGGAATTCAAagttcaaaaaccttttttgttatGTAAAGGAGAAAATAGTGAAATTATAGGTTTATGGTTTTATGATCCAAGAGAATGTCAAAGATTTGGAACACTGTTGAGTAGGTTATCAGTATTATCCAAAGATGAACGATCTTTGAAAATTGCCATCATGATGGAAATCCAGAAAAGACAAGCTGTATCATCTGAAATCCAGCAAGTGAAGCAACCCAAACCAAATGGACTTCTCTCAATGTTTACTAAAGCACAGCAGGAATTTGAACAGTCGCGAGGTCGAACAAAGAATGCACGTGATAAAAATAAGCAGGGTAAAAAGCATAACGATTCTGCGAGGCGGAAATCAACACCAAGCTTGCAAACAGATCAAATCAAGGGAAAAACTAGTccatcaaatgaaaaagaaaaccaaaaagcTTATCAACAGAGAAAATTCATCAAAGATCATCAGAAAGAGCAAGAAATACTTCTTCGAATATTACATGGTAATAGTGACTTCTCATCTGGGACATTAAATGGAAACTTTGATCCAGCTCAAAGAGTTATTCGTACTCGTACAATGTCATCAAGTCATGATTTAGACACTGAATCAAGTCAACGTGAGAGTATCCATAAGTTTTCTTCTCAGGCTGGTGATTTAGCTATTTTTAACAAGTTGGGAATCATAACCGAAAACTCAAACCaaaatatcaaccaaaaaaaagtaattggttgtGCAGAGTTAGAGTCTGAGCTACTAAATCGTAATAGAAGTGATAATGATTTGAAGCTTCTACACCGCAGTGTGAGTTGTGATAGCTCAACAATAAGAACTGCTAAAAGTACACCCAATGTTGGTGAGTATCTACTATCATCAAAGGAGGAGAAACCAGAGAAAGTCACAgatctattggaaaataaatcaGTGGTTACTAGTTCAAATGTGGGGATTACTTCTAATGTGAGTCTTTTGTCTCCAAGTTCAATGAAGAGCAAGTCTTCAGGCAAAGGAAGAGGCACAATAATGACCACATTGATGAATGGGCAGCAAAAAATTTCTCTGGCTGcaaatttcaatCAATCAACGAAATCCTTGAAGAAGctaTTTCCAGACGATTCCAAAACCGAAAACAAACTCTCTGAAGCGCCATCTAGTGCAGCTGTCAACTCTTTAATTACCCCTGCAGCTTTCCAACAGAGCACTTCTGCAACACATGGTACCACCAAGCCAAATGGTAACAATATTGAAATGCTTCTGGATAAAGAGCAATTCCAAGAGGCATTAATTCATCTTATAAAGACAGATGACAAATTTGTGACAACCTTGCATGATGCTTACCTAGAAGTGAAAGCTAATCGATGAGTTTGGGAAAAGATTAGATCTGGAGTAAGCGAGACTTTGTCAAATGGTTCAAGCATTCCTCGTAAGATCAAGATGTGAAATATTGAAAAGCAACCGTTGAAGGTTGTCTTAAATTGAGAGGAACAAATATAAAGCGTGCATTCAGAGTAGCATTTTCGATTTCAGAATATTGAGATGCTCTTCACATGCAGAAAACAGATCCTCCATCACacttgttttttcaaagattttctgaacatttttggaTAAAAGCTTTTTTATCGAATTAGTGTTGAGAAAATTATTCTAATCATTAGCAACGTGTGGCAATAAAAGCAAAGGCAGTAGTGACTGGTTTTCTGAAAAGGGATCATAgactaatatttgtaaaaattttcaaaaccattgtagatgttttttgtgcaatcttgttaatttttttaaaagaagtcaTGAGAGGGTATGAGGAGAGGGGTATGAGTGTTACCTGACGGAATTTGTACATTTTTGTTACTTTCCATTGGTGATAGAGGGTGTTGAAAGACTGCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SZL6	mRNA-decapping enzyme 1B OS=Bos taurus OX=9913 GN=DCP1B PE=2 SV=1
Q5R413	mRNA-decapping enzyme 1B OS=Pongo abelii OX=9601 GN=DCP1B PE=2 SV=1
Q8IZD4	mRNA-decapping enzyme 1B OS=Homo sapiens OX=9606 GN=DCP1B PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006381 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16741 all species →	mRNA_decap_C	mRNA-decapping enzyme C-terminus	Domain	Interproscan
PF06058 all species →	DCP1	Dcp1-like decapping family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010334 all species →	Family	mRNA-decapping enzyme subunit 1	Interproscan
IPR031953 all species →	Domain	mRNA-decapping enzyme, C-terminal	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16290 all species →	TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000290 all species →	Biological Process	deadenylation-dependent decapping of nuclear-transcribed mRNA	Interproscan
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0008047 all species →	Molecular Function	enzyme activator activity	Interproscan
GO:0031087 all species →	Biological Process	deadenylation-independent decapping of nuclear-transcribed mRNA	Interproscan
GO:0043085 all species →	Biological Process	positive regulation of catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12611	DCP1B; mRNA-decapping enzyme 1B	EC:3.-.-.-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.