Gene detail

Detailed information of ENSODKP00000014137.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_012558576.2, leucine-rich repeats and immunoglobulin-like domains protein 3 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000015701

ATGTTGTTATATGTAATATTTTATGTAGCATCCTTACATATTTATCTACTGCTTATGACAACTACCATTCAGGTTGCTGCCTGCCCAGTTGTTTGTAATTGTGTTAATACTACTGTGAAATGTATTGGGAGAGACTTGGATAGACTACCAACAGGATTGCTGGAAAACATTACAGCattATACCTGGATCACAACCAACTGACAACGATACCCAATATGTCTGAATTTTCCAGCTTGCGATTTTTGTCATTGTCAAACAACAAGATTTCGTTGTTGGAAGGAAATTCGTCCGaacatcttaaaaacattcgAACTTTaaACTTAAGTCGAAATGATATTGAGAAACTGCCAGACGCTGCATTTAAGGGCATGCCGGATGTTGAAATATTAGACTTTTCCAACAATCATCTAAATGATATCACTGGATTAGCAACATATTTGGATAACTTAAAGGAACTATACTTGGATCATAATAACTTGAAAGATATATGGCATATACGTAGAAATAAAATGCCAAACCTGCTCactttgagTGTTAGTTACAACAAGATTCAACGTTTAATTGCAGATATCGATAAAGGAAATGAAGCTTTTCCCAGACTTTATTTTATgaACTTGAGTCACAACTCGATTACCGATATTGATATGTTTCTTACTAGATTTAAATCTCTGAGGAAACTGCTCCTGTCATATAACAGATTGCGGTCTATTGTATCAGCGTCTCTCTTCGGAAATTACGATTTGCAGGAATTATATCTTGATCACAATGAGTTGGACGTAGTTACGAGTGCTTGGTTCACTTTCAAGGAAAATTTAAGAGTTCTAGATTTGCGTTTCAACAAGATATCTCGAATTAATCCTGGATCATTTGAAGGTGCCGTATTTATTAAACACCTAGATTTGTCCAATAATAAACTCAGGGGATTAGAAAGAGAAGCATTCCTACCGCTGAAGAATCTAACATACCTCAACCTACACAACAATAGTATCAGTTACGTATCCCAATATGCGTTCGAGGGATTAGACAACGTAAAGTTATtgaatatgagcaaaaatgacaTCTCAATTGGCGAACGGGAGTTTGATACTGCCTTCGAACCGCTGGTCAGTCTGCAATCATTGGATTTGTATGGTAATAAGATCTTGCTAATTCCAACTGGAGCGTTCCGTGGCTTGTCCAGTTTAAAGCACTTAAACTTGTCGGGAAATGCAATTAAAGTAGTAGAAGAGGATGCTTTCAAATATATCCCAGTAATTGAGGAAATATCTTTCCAAACAGACGATTTGCTTTGTGGTTGCTCGGCGAAATATCTCCGCAACTGGATCATTACAAATCAACTAGAAAGCAATATCCAAGTCACATGTTCGTCACCCATTTGGTTGAAAAACAGAAGTATTAAGGAAGTGCTTGATTTGGAATTAGTTTGTGTTAATCGCTCCTCCCAACCTATTCGTCCTAAAGTTACAAGTCAGCCATCgtcaaaaaacgttttaaaatatgGTAACGCAAATCTTACTTGTGCGGCATCATCATATATCAACACACCCATATTTATTTACTGGTACCATGGCAATGAACTTTTGCCCAGCAAACAGTCAATATCACAAAGACAAGAATTTATTCACAGCCTACAGTTGTATCAGCGAAAATCCACATTGCATTTAAGCAACATTAATTTCAAAGATGCTGGCTATTATTTTTGTCACgtgtcaaatatttatggaagTGATTGGTCCAATAGTGCTAATTTAACTGTTGTTGttacaccCGAACTCTCTcccaaaattaaaactaatatcgTAATGCGAAGTGGGGAAGATGTATTTATTCCTTGCGCGGCAACAGCAGGCCTCCCAGTGCCACGAGTTTTCTTTACGAAAATAAAACCCAAGAGACCATTTCCAGCTGCGTTAGAGAAACGTATTGTTTATCAGAACCATTTGATTGGGATTAAGAGATTAAAGATCAACGACAGTGGGTTGTATTCCTGCTCAGCTAAAAATATAGTTGGAAGGGTCAATGTCACCATCAAGTTGGATGTTATAGAGGAACCGAGATTTAGACGGTCtatgaaaaacaagaaagtgaAACTTGGAGCACAGGCTTTTCTTGATTGCATTGTTAGTGGAAACCCAATACCAGAGGTCACGTGGTTCAAAGGTAACCAAAAGTTGATGCCATCAAGACGTTTGCGATTGTCGAAGCATCTATTGGTGATAGTTCGATTTACGAATGATGATGAAGGGGAATATTCATGTGTAGCAAAAAATCGCTTAGGTTATGACAAACAATCCGCGCGTTTGTTGGTAGCCGGCCAAGTAGCTTCGACTAAACAGCAGTCAGATTTGCCacatggtgtttttattgctattatcatcgTTACCGTTATATCAGTAGTAGTTCTGACATCTTTAGTTTGGACAATGTTATTATGCTATTGTCGTAAAAAACGCCGCGAAAAAATTGAGCAAGAAAATAGGCAGTTAATAAGTTGCTATCAGGAGGATCCATTATTATGTGAGCTTCCAAAAAACTACACATTACGTTATCATGGCCAAACTGTCAAGGCTGCAGACTTACATAATGGTAGTAATGTAGCGTTACGTAACGAAAATTTGGCTCCAGACAATCGTAATAATCGAAACGAAGGTGGTGCCTTTGATGTTGAAGATGACAGTGGAATTGCTTTGTATTATCCGAAACGTATTTCATTAAGTTCTCAAGTCAGATCCGCAGGTAAAAATCAAAATCCAGAAGACATTAGATCTCTAAACAATAACCATCAAACCCGAAATGAAAGAAGTGGTTCTGCTTCAGGACTTAGgactttcaaagaaataaataatagtgGAGATAATGGTATTATCACCCAAActaattacttttcttatttaaacactagaataaataaaaagtttctatctAAAAACGAAAGGACTGTAGCAGTCGATGCATATGAACTTGATCATATTGAGTACGATCCAACTCGCCTTAAAAGTGTCTCACCATCTTcaagaaaaaaacgaaaagaatataaactttcaaaagaaaaagctcTGAGCCAGCAAAGTGAAGACATTCCCTCCTATGTGACATCATCTAGTGGAATAGAATCTGAATGTAGTGAAAGTTCTGAAACTGGGTCACTCAAGCATGAAGCTTTGGTGATAGCGGCTCCTCAGTCAATAGCGGCGGGGTGA

Transcript

ENSODKT00000015701

AACTCGCAGGGAATTTTAAAAACCATCATTCTGAAATCACACCGAAGCTAGGGAGAgttcaataaaaacattcaaaaaaagctGCTGTATCGCAACGCGAAGTTGATGGTTGAGCGTAGCTGTTATTTTGGAAACTGTAGGCTAGATGGGGAGTcagaaataatttaaagaaaacatgTATATGTCAAAGCTAACTATATCACCGAGTAACATTTCTCTCGCtccaaatacaaatatattgacAGTATTGTTTTGATAGAACTCAACAGTTGGCTACCTACCAGGGAAGCAGAAAGGCAATGTTGTTATATGTAATATTTTATGTAGCATCCTTACATATTTATCTACTGCTTATGACAACTACCATTCAGGTTGCTGCCTGCCCAGTTGTTTGTAATTGTGTTAATACTACTGTGAAATGTATTGGGAGAGACTTGGATAGACTACCAACAGGATTGCTGGAAAACATTACAGCattATACCTGGATCACAACCAACTGACAACGATACCCAATATGTCTGAATTTTCCAGCTTGCGATTTTTGTCATTGTCAAACAACAAGATTTCGTTGTTGGAAGGAAATTCGTCCGaacatcttaaaaacattcgAACTTTaaACTTAAGTCGAAATGATATTGAGAAACTGCCAGACGCTGCATTTAAGGGCATGCCGGATGTTGAAATATTAGACTTTTCCAACAATCATCTAAATGATATCACTGGATTAGCAACATATTTGGATAACTTAAAGGAACTATACTTGGATCATAATAACTTGAAAGATATATGGCATATACGTAGAAATAAAATGCCAAACCTGCTCactttgagTGTTAGTTACAACAAGATTCAACGTTTAATTGCAGATATCGATAAAGGAAATGAAGCTTTTCCCAGACTTTATTTTATgaACTTGAGTCACAACTCGATTACCGATATTGATATGTTTCTTACTAGATTTAAATCTCTGAGGAAACTGCTCCTGTCATATAACAGATTGCGGTCTATTGTATCAGCGTCTCTCTTCGGAAATTACGATTTGCAGGAATTATATCTTGATCACAATGAGTTGGACGTAGTTACGAGTGCTTGGTTCACTTTCAAGGAAAATTTAAGAGTTCTAGATTTGCGTTTCAACAAGATATCTCGAATTAATCCTGGATCATTTGAAGGTGCCGTATTTATTAAACACCTAGATTTGTCCAATAATAAACTCAGGGGATTAGAAAGAGAAGCATTCCTACCGCTGAAGAATCTAACATACCTCAACCTACACAACAATAGTATCAGTTACGTATCCCAATATGCGTTCGAGGGATTAGACAACGTAAAGTTATtgaatatgagcaaaaatgacaTCTCAATTGGCGAACGGGAGTTTGATACTGCCTTCGAACCGCTGGTCAGTCTGCAATCATTGGATTTGTATGGTAATAAGATCTTGCTAATTCCAACTGGAGCGTTCCGTGGCTTGTCCAGTTTAAAGCACTTAAACTTGTCGGGAAATGCAATTAAAGTAGTAGAAGAGGATGCTTTCAAATATATCCCAGTAATTGAGGAAATATCTTTCCAAACAGACGATTTGCTTTGTGGTTGCTCGGCGAAATATCTCCGCAACTGGATCATTACAAATCAACTAGAAAGCAATATCCAAGTCACATGTTCGTCACCCATTTGGTTGAAAAACAGAAGTATTAAGGAAGTGCTTGATTTGGAATTAGTTTGTGTTAATCGCTCCTCCCAACCTATTCGTCCTAAAGTTACAAGTCAGCCATCgtcaaaaaacgttttaaaatatgGTAACGCAAATCTTACTTGTGCGGCATCATCATATATCAACACACCCATATTTATTTACTGGTACCATGGCAATGAACTTTTGCCCAGCAAACAGTCAATATCACAAAGACAAGAATTTATTCACAGCCTACAGTTGTATCAGCGAAAATCCACATTGCATTTAAGCAACATTAATTTCAAAGATGCTGGCTATTATTTTTGTCACgtgtcaaatatttatggaagTGATTGGTCCAATAGTGCTAATTTAACTGTTGTTGttacaccCGAACTCTCTcccaaaattaaaactaatatcgTAATGCGAAGTGGGGAAGATGTATTTATTCCTTGCGCGGCAACAGCAGGCCTCCCAGTGCCACGAGTTTTCTTTACGAAAATAAAACCCAAGAGACCATTTCCAGCTGCGTTAGAGAAACGTATTGTTTATCAGAACCATTTGATTGGGATTAAGAGATTAAAGATCAACGACAGTGGGTTGTATTCCTGCTCAGCTAAAAATATAGTTGGAAGGGTCAATGTCACCATCAAGTTGGATGTTATAGAGGAACCGAGATTTAGACGGTCtatgaaaaacaagaaagtgaAACTTGGAGCACAGGCTTTTCTTGATTGCATTGTTAGTGGAAACCCAATACCAGAGGTCACGTGGTTCAAAGGTAACCAAAAGTTGATGCCATCAAGACGTTTGCGATTGTCGAAGCATCTATTGGTGATAGTTCGATTTACGAATGATGATGAAGGGGAATATTCATGTGTAGCAAAAAATCGCTTAGGTTATGACAAACAATCCGCGCGTTTGTTGGTAGCCGGCCAAGTAGCTTCGACTAAACAGCAGTCAGATTTGCCacatggtgtttttattgctattatcatcgTTACCGTTATATCAGTAGTAGTTCTGACATCTTTAGTTTGGACAATGTTATTATGCTATTGTCGTAAAAAACGCCGCGAAAAAATTGAGCAAGAAAATAGGCAGTTAATAAGTTGCTATCAGGAGGATCCATTATTATGTGAGCTTCCAAAAAACTACACATTACGTTATCATGGCCAAACTGTCAAGGCTGCAGACTTACATAATGGTAGTAATGTAGCGTTACGTAACGAAAATTTGGCTCCAGACAATCGTAATAATCGAAACGAAGGTGGTGCCTTTGATGTTGAAGATGACAGTGGAATTGCTTTGTATTATCCGAAACGTATTTCATTAAGTTCTCAAGTCAGATCCGCAGGTAAAAATCAAAATCCAGAAGACATTAGATCTCTAAACAATAACCATCAAACCCGAAATGAAAGAAGTGGTTCTGCTTCAGGACTTAGgactttcaaagaaataaataatagtgGAGATAATGGTATTATCACCCAAActaattacttttcttatttaaacactagaataaataaaaagtttctatctAAAAACGAAAGGACTGTAGCAGTCGATGCATATGAACTTGATCATATTGAGTACGATCCAACTCGCCTTAAAAGTGTCTCACCATCTTcaagaaaaaaacgaaaagaatataaactttcaaaagaaaaagctcTGAGCCAGCAAAGTGAAGACATTCCCTCCTATGTGACATCATCTAGTGGAATAGAATCTGAATGTAGTGAAAGTTCTGAAACTGGGTCACTCAAGCATGAAGCTTTGGTGATAGCGGCTCCTCAGTCAATAGCGGCGGGGTGAAAATTATGAGAAATATtgcattttgatataaaaaatcgtCTGAGGTAAAACGAGGCTTTCGTACGTACTACTGTTACTTAAACCAGCATGGCTTGATGGGATGTAAACATATTCAAAGCATCTAGGGAGACataacaatttttgaattatgttcagaattaattaaaaatactcgAAAGTCCTTTCAAttttgctatcatatagaaatcagtcaattgatttgttatgctaattaattgactggtttctgtgtgaaggcaacattggaagaaatttacattactattttttttgaacatatttcagatattttataCTACTGCCTCTATGACGTTTTCTTCTGCCATTACaggttatttttattaaatgtctCGTATTGTCCAAAAAGCGTCCGAAATCGGAGTTTTCTGGATTATATTTCCCTGTATTCGGACAGAGTaagggaaaatacagaccagaaaaaaactactaATTCGGATACTTTTCAAGCATTGCGAGTTCTCAAGCATTGTCTGCttgtgttttaaaatattgtctCTGAGTATAAATGTGGCATCATGGTCATCAAAGAAAgctgtttcataatttttttgggCAAATGCTCCTGATTACATTCATTGGAGAGACGACGATATTTGACATACGTCAGTCGCCTTTATTTGAATTcaacaaaaagcaaatataatAGTAATTGAACAAGTAATTGAAACACATTCACAAGAGATATAAAAAGTTCTTAAAGACAtgtgtgaaatttgctcaaagtttgcAATGAAAAGCACCCGAACAACTTCAAGGACGTCGTTCATGTTCCGTTATAGTAAACTATGAGTAAATGCTTTTACTTTACAGTATTGTTGATAAACACAACCGGTTGGATTGCTTTATGGAACGGTAATGTTGTAAATAAATCTCTTTACTACTTTGAGCCATTACGAATTATCTGGAAAATTTTTCGATCCAACTTTCCTTCCTGAAGAAGTACTTAGTGGGAGTTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96JA1	Leucine-rich repeats and immunoglobulin-like domains protein 1 OS=Homo sapiens OX=9606 GN=LRIG1 PE=1 SV=2
O94898	Leucine-rich repeats and immunoglobulin-like domains protein 2 OS=Homo sapiens OX=9606 GN=LRIG2 PE=1 SV=3
Q6UXM1	Leucine-rich repeats and immunoglobulin-like domains protein 3 OS=Homo sapiens OX=9606 GN=LRIG3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005677 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR000372 all species →	Domain	Leucine-rich repeat N-terminal domain	Interproscan
IPR050467 all species →	Family	Leucine-rich repeat and fibronectin type-III domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45842 all species →	SYNAPTIC ADHESION-LIKE MOLECULE SALM	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000014137.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.