Gene detail

Detailed information of ENSODKP00000016159.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047128774.1, glutamic acid-rich protein isoform X2 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

ENSODKT00000017846

ATGTTTCTTGATGCAGAAGAAGGAGCAAATGAAAGAAACCTCAGTGACTGTTGCAGTGATGACGACATTGACGACCTAGAGACAATATTGTATGGACAAGTGCATTTTGCATCAGCTTTAAATGTTGACATTAGCAAGAATGAAAGACCTGCAGGAAAGACTGACTCTGAATGTCCAAGTGGAGATAAAGAACAGGAGGAGATCACAATTACTGAAGAGCCAATTATTCCAGAAGTACTTGTCGAAGATCAGTGGGCACATTTTGTCCTTGGGAGAGAGAAAGACAACTGTGCACTAAACGAGGAATcCCAGAAAAAAGTGGAATGGCATGTGGATGAGTTTGATGGCGATacTAAAGCAGCTCCACAAAAGTATCCAAGATATTATACATCCAATATTGGAAAACTTCCAGAGATATATTGCTACAATTGTGATAAAAAAGGACATTTGGGAAGAGATTGTACaaataaaaagAAGATTCCGTCGTGTTATCTTTGTGGAGAGAAAGGGCACATACGCTCCAGCTGTCAGAACGACTTGTGTTATAACTGTATGGATGTTGGTCATATTTCGAAGGATTGTAGGAAGAGAAAGAAGAAGTTTGCAAAACAACGGCCATGCAAAAGATGTAAACTTCAGGGCCATATTTCGGAAgaGTGCACAGAAATATGGCGACAGTATCACATCACACGTTGCTTGCAAGACCGCTATTCAAAAAGACTGGTTTTTTCACCATTCATTGTGAACTATGATAAGTGCCAAGAAATCGACAATGTCGATATAACCTATAAAGAACAGGTGAAGTCTCAAATGGAACATCAACTCAAAactcagaagaagaagaagaagaagaagaaaggaaAACATTCAACTGATAtgacaaacaaagaaaataaaactaataataaatcgagttctggagatattttgagaaaagaaaCCATGACCAAACGTGACATTAAAGAAGGCAAAGTAAGGAAATCAGGGGCCTCAAACACTAACGGTCatggaagtaataaaaaatcaaattcaaggGATAACAAATCGAGTGAAAACAAAAGTTCAGTCCTCGTTGATAAAGCGAATGAAATTATTGCTGCAACatcagagaaaatgaaaaagaataagaaaaagaaaaagaaagggagTAAATGCaaggaaaacattgaaaaaatcagTCAGTCATTTGTAGTAAAAGAGGTAACTCCGGATAACCAATTAAAGAAAGACACACcagaagaagaatcaaaagatagaattaaaaattgtcgaaagcctgaGGAAAATTTAGTAAGTCTCACTGATTCCAAAAGATCTAAAAAGTTGAAGAAGAAAGTACTGGCAAAAGAGCAAGTTAAagtaaagactaaaaaaagttGCATGAATAGCATCATTGAATCAGGAGAACATGGGCAACAAGGAGCAGATCATAAGCCAGAGGAAACCCCCAAATCACGTAAAAGAAAGATTAGTTTAAATCCTTGGATATCTGAGGAAGGTAGCATGAGTGCTTTGTCAGAACAGAATAATTCATGGTCTTTAGCAGATCATCTTGGAATAACAGACAATAGCGGTCACCAGTTGGAAAgtgaaaagaagaaacaaaagaggaATTTTGAAACAGGAGAAGAATTTATTGTAGTAGAcgaaattttagatgaatctgaAAATGAGATAGAGAACAAGAACAGTAAAGTGAATAATAGGAGTGCTCCAAGTCCTACAGAGTGGGAAATGAAGGAAAGtgctttaataaagttggagaaAAAGAATACTACCCCCAAAAGCTCTATAACTGAAAATTATGATTTTGTCCCCacagagaaaaatgaaaaaaaagaaagcaaaggaGGCAGTTATGATGAGTCAGGGAGTGAAACAGAAAgcaagaaaacagaaaaagtactTGGTATTAAGTCGTTGACTCCGAGTAGAATGGACAGTACCTCACGTACTTCTCTAAAAATAGAGAATGAAAAAACTActgcaaaaaactcaaaaactaatGACCGTGATTTTATCcctttggaaaaatttgaaaaaatagaaaacatgaaGAACATGCAAAAACAACCTAGAAGTGATAGGGACAATGGCAAAAGAAATTCGAACTCCAGTAGCACATCAAGAAATGCTACGGCACTGGAAAGTAAGGAAAATGCGACACTGAGTTTCGAAAAAAGCAAGGCTGCTACTAAAAATTTGTTTGCAGAAAACTGTGATTTTGTCtctttgggcaaaaatgaaaaagtagaaaatagcGAGAAACGCAATCAACGGAAAGCAAGTCGTGTTGTGGTTGAAAAGGAGATatcgagaaaacaaaaaaagagttgGAGGCGAGAAGATGACTTAGACTATATTACACTAAGtaagcttgaaaaaatattgcagtcAGATGAAGAATCAGACGCTGGCTATAAAGAGAACACTACAAAAAATATCTCAAGTCCAGAGATCAACTTATCAGTTAACGAATCAGTAAATCCAGAAAGTGTCAGTCAAAAATCTTCTTCACCGAGAACTAAAGGAAACATGGCCAGTGCAGATCCATCCTGTTATCAAATAGACTATACCCGTTACGATCCCTGTGAAGTGAAATTGGAAGGTTTGGAAGACTATGGTCTAGTGGGTGGAACAAAGAAATTTCCTGACAGTAGCACCCCAGTTCCAAATAATGGGCAGCCCAAGATGATAACTAAAGATGGTGTAAGGTTTCAGTGGAATCCATACAGAAGGCAGTACGTGGATTATaacaaGAAAGAggcaaagaagaagaaaaacagagaaaaaaaggATCGTTTAAAGCTTGAACAAGCTATGAGAAAAGCAAATGAGAAGAAGTTGCATGAAGCATCGATAAAAACTAGTCGACGAGTACAACAACATTTCGGGCCGCGATATAGACCTCAAACAGTACCACAATATGTCAGTCCTTTGCACAGACCGCCTCTCCCACCAAACCGTATTCCTAGAggatttacttttaataattacggttttccttttcaataa

Transcript

ENSODKT00000017846

agataccataaatgaaaaatatattgaaaccagtAATATTTACTGTTATATGGTATGATTGGTCAAGAATAAATGTTCATTATTCAGAATAAAATCATATATCTTCACTTCACTGAGCTGACTTTGAATTTAAAACGTGCTAGCCTGGTTCTTGAATTGACACTAAAGATTTTGAGAACCAAAAACAAAGATGACGCAAGATGTTTCTTGATGCAGAAGAAGGAGCAAATGAAAGAAACCTCAGTGACTGTTGCAGTGATGACGACATTGACGACCTAGAGACAATATTGTATGGACAAGTGCATTTTGCATCAGCTTTAAATGTTGACATTAGCAAGAATGAAAGACCTGCAGGAAAGACTGACTCTGAATGTCCAAGTGGAGATAAAGAACAGGAGGAGATCACAATTACTGAAGAGCCAATTATTCCAGAAGTACTTGTCGAAGATCAGTGGGCACATTTTGTCCTTGGGAGAGAGAAAGACAACTGTGCACTAAACGAGGAATcCCAGAAAAAAGTGGAATGGCATGTGGATGAGTTTGATGGCGATacTAAAGCAGCTCCACAAAAGTATCCAAGATATTATACATCCAATATTGGAAAACTTCCAGAGATATATTGCTACAATTGTGATAAAAAAGGACATTTGGGAAGAGATTGTACaaataaaaagAAGATTCCGTCGTGTTATCTTTGTGGAGAGAAAGGGCACATACGCTCCAGCTGTCAGAACGACTTGTGTTATAACTGTATGGATGTTGGTCATATTTCGAAGGATTGTAGGAAGAGAAAGAAGAAGTTTGCAAAACAACGGCCATGCAAAAGATGTAAACTTCAGGGCCATATTTCGGAAgaGTGCACAGAAATATGGCGACAGTATCACATCACACGTTGCTTGCAAGACCGCTATTCAAAAAGACTGGTTTTTTCACCATTCATTGTGAACTATGATAAGTGCCAAGAAATCGACAATGTCGATATAACCTATAAAGAACAGGTGAAGTCTCAAATGGAACATCAACTCAAAactcagaagaagaagaagaagaagaagaaaggaaAACATTCAACTGATAtgacaaacaaagaaaataaaactaataataaatcgagttctggagatattttgagaaaagaaaCCATGACCAAACGTGACATTAAAGAAGGCAAAGTAAGGAAATCAGGGGCCTCAAACACTAACGGTCatggaagtaataaaaaatcaaattcaaggGATAACAAATCGAGTGAAAACAAAAGTTCAGTCCTCGTTGATAAAGCGAATGAAATTATTGCTGCAACatcagagaaaatgaaaaagaataagaaaaagaaaaagaaagggagTAAATGCaaggaaaacattgaaaaaatcagTCAGTCATTTGTAGTAAAAGAGGTAACTCCGGATAACCAATTAAAGAAAGACACACcagaagaagaatcaaaagatagaattaaaaattgtcgaaagcctgaGGAAAATTTAGTAAGTCTCACTGATTCCAAAAGATCTAAAAAGTTGAAGAAGAAAGTACTGGCAAAAGAGCAAGTTAAagtaaagactaaaaaaagttGCATGAATAGCATCATTGAATCAGGAGAACATGGGCAACAAGGAGCAGATCATAAGCCAGAGGAAACCCCCAAATCACGTAAAAGAAAGATTAGTTTAAATCCTTGGATATCTGAGGAAGGTAGCATGAGTGCTTTGTCAGAACAGAATAATTCATGGTCTTTAGCAGATCATCTTGGAATAACAGACAATAGCGGTCACCAGTTGGAAAgtgaaaagaagaaacaaaagaggaATTTTGAAACAGGAGAAGAATTTATTGTAGTAGAcgaaattttagatgaatctgaAAATGAGATAGAGAACAAGAACAGTAAAGTGAATAATAGGAGTGCTCCAAGTCCTACAGAGTGGGAAATGAAGGAAAGtgctttaataaagttggagaaAAAGAATACTACCCCCAAAAGCTCTATAACTGAAAATTATGATTTTGTCCCCacagagaaaaatgaaaaaaaagaaagcaaaggaGGCAGTTATGATGAGTCAGGGAGTGAAACAGAAAgcaagaaaacagaaaaagtactTGGTATTAAGTCGTTGACTCCGAGTAGAATGGACAGTACCTCACGTACTTCTCTAAAAATAGAGAATGAAAAAACTActgcaaaaaactcaaaaactaatGACCGTGATTTTATCcctttggaaaaatttgaaaaaatagaaaacatgaaGAACATGCAAAAACAACCTAGAAGTGATAGGGACAATGGCAAAAGAAATTCGAACTCCAGTAGCACATCAAGAAATGCTACGGCACTGGAAAGTAAGGAAAATGCGACACTGAGTTTCGAAAAAAGCAAGGCTGCTACTAAAAATTTGTTTGCAGAAAACTGTGATTTTGTCtctttgggcaaaaatgaaaaagtagaaaatagcGAGAAACGCAATCAACGGAAAGCAAGTCGTGTTGTGGTTGAAAAGGAGATatcgagaaaacaaaaaaagagttgGAGGCGAGAAGATGACTTAGACTATATTACACTAAGtaagcttgaaaaaatattgcagtcAGATGAAGAATCAGACGCTGGCTATAAAGAGAACACTACAAAAAATATCTCAAGTCCAGAGATCAACTTATCAGTTAACGAATCAGTAAATCCAGAAAGTGTCAGTCAAAAATCTTCTTCACCGAGAACTAAAGGAAACATGGCCAGTGCAGATCCATCCTGTTATCAAATAGACTATACCCGTTACGATCCCTGTGAAGTGAAATTGGAAGGTTTGGAAGACTATGGTCTAGTGGGTGGAACAAAGAAATTTCCTGACAGTAGCACCCCAGTTCCAAATAATGGGCAGCCCAAGATGATAACTAAAGATGGTGTAAGGTTTCAGTGGAATCCATACAGAAGGCAGTACGTGGATTATaacaaGAAAGAggcaaagaagaagaaaaacagagaaaaaaaggATCGTTTAAAGCTTGAACAAGCTATGAGAAAAGCAAATGAGAAGAAGTTGCATGAAGCATCGATAAAAACTAGTCGACGAGTACAACAACATTTCGGGCCGCGATATAGACCTCAAACAGTACCACAATATGTCAGTCCTTTGCACAGACCGCCTCTCCCACCAAACCGTATTCCTAGAggatttacttttaataattacggttttccttttcaataattACTAATTATGAAATGTCAGGGACTTTTATGAGAGAATTACTGTTTCCATGGAGTATTTTCTATTTACTAGTTCAGTGCTTTATACCTTATTTGGAAAGGGAAGACGGCAAGACACAATTATCACTGAATTATGTAATTAAAGAAACTTCCACTGTTAACCTTTTTCGGAATGATTGCCAATTTTGTGGTTATAGAATAATATATATAGTTTCGATCTTTTAACGAAAACTTTTGATATAACAAGTTTGGTGTACAAGTTCAAT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005521 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098 all species →	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR051644 all species →	Family	TRAMP complex component and AT-rich DNA-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46543 all species →	ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0031499 all species →	Cellular Component	TRAMP complex	Interproscan
GO:0043629 all species →	Biological Process	obsolete ncRNA polyadenylation	Interproscan
GO:0071031 all species →	Biological Process	nuclear mRNA surveillance of mRNA 3'-end processing	Interproscan
GO:0071035 all species →	Biological Process	nuclear polyadenylation-dependent rRNA catabolic process	Interproscan
GO:0071036 all species →	Biological Process	nuclear polyadenylation-dependent snoRNA catabolic process	Interproscan
GO:0071037 all species →	Biological Process	nuclear polyadenylation-dependent snRNA catabolic process	Interproscan
GO:0071038 all species →	Biological Process	TRAMP-dependent tRNA surveillance pathway	Interproscan
GO:0071039 all species →	Biological Process	nuclear polyadenylation-dependent CUT catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000016159.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.