Gene detail

Detailed information of ENSODKP00000017141.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047128927.1, transcription initiation factor TFIID subunit 12 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000018830

agaaaaatatgtaaattattatggTACAGAAATCAGCCAATGAAACTTGTTAAGAAACAATTTTGGAACTTCTACGGATATCATCTTCATTTATGAGCCCTAACACCAccacatattttatttattcagcAATATTAGCATTAAAACTGTAGTAAATATGAACACTCAGCAAGCAGGTACACCCGCTGCATCAACACAGCAAGTTGTTGGAACATTAGGATTAGTAAACCACCAGGGAATGAATGTACTGCAAGGTCAGCTAACACCCCAACAGATCGCTGCATTATCACAGCAACAAGCAACAAGTCAGCAGCAGTTAGCTGGAGTAGGAGTCCGACCAATTGTTAACATTGTTGGAAATCAAGTGTTAGGTGGTCAAACATATGCTTTAGCATCCAACTTACAAGCAGGAGTTGCAACAAATAGTATCCCAACGCAAATGCAGATTCGCTCTTTAGCTCCAAATGCTGCAGCAGTGGTTAATCAACTAAATGCCAATCAAATGCAACAAGTTCGAGCAGCTGGTTTACAACAGACGCGAGTGCAAgCATCGCCGAATGTAGCACCAGTAAACTCGCCGAGTCAACATGGAAAACCCCCACAACCAGTTAATCTAAGTTTACAAGTTCAGGGAACTTCACCCAGCCCTGCAGCCACACCAGCGCCAACATCACGACACAATCAAATGTTATCTAAACGTAAACTGCAAGATCTTTTGCATGAAATCGACCCTAGCGAAACACTAGATGATGATGTGGAAGAAATCTTATTGCAAATTGCAGATGATTTTATTGAGAATGTTATCAGCACATCATGTCAAATTGCGAAACATAGAAAATCTAACACTTTAGAAGTAAAAGATGTCCAACTTCATTTAGatcGAAATTGGAATATGTGGATCCCTGGTTTCGGAAGTGAAGACCTGAGACCTTACAAAAAGTTACCTTCGACTGAAGCACATAGACAGCGACTTGCATTAATCAAGAAAGCgatgaagaagtaaaattgaCCGGCTTTGGCAGGGTGTTTTTGCATTCATTTTGGCAGCTGTAAAAGCTTCACGTTTTGCTGGTATATGCGACAGAAAAGTTAAATTGGCGTATTAACAGACCGTCCGTAATTTTAGCACATCATGTTTTGATATACACGTTAAAATTGGAAGTGAGCTGAAGCGTTAGGCTGAAATGCAGTTAATGACGTACAGATCAAATTGTCACTTGTTATTGTAAGCCTAGCGCGTGACCTGCGAATGTTCATTGACTAGAGACAATTACGAGAATGTTTAAAATTAGGTTTATGCATGACTGTGGGAGACGTTATGTTTTGTCATCCGCAGAAATGCTAATCATTGTAAAGACAAATTTTCGAGGCTGGGATTTGTAAAACATAcaaatatctttaatttctttaatttatttgataaaactacaaaaatatacaCCTTGCTTTTTAATTTACCGTAAAATCAATGTACTACGTCGGCCTCGATACGGACAAAAATCGTATCATCAATAAGATATCTTCGctctaataatttttcatgtgaaataaagtCATCAAAACCGACAATCAACGCTTTGGTACTGTCACTTGGCCGTGGTATACCTCCATGCTTAGCAATTAAATTATTGCCCTTATCAGCGATATCCATTACACGACGTACTTTTACATGATCCTCGCGCTTTAGAATATCTCCACGTTGATCAATTAAAGTAAAACTATATGTAGGTTTGATAGGCCATGGTAAAATTGCGTCATACTCACCAACAACGACGCAAACGTAAATAGAGATATAAGTATCTCTCATTCGACCTCGACCATTCAAATATAGCCACGACGTCATTTTGTACCCATAAGTATCTGTTAAAAATGGCGGACTTACTAAGACATCCTCCATAAGCCCTGACTTTATACGTGTCAATCTGGACATAGTTTCACTTAATTTCCAAATATGAAATCCGGAAGTACCGATTTTACTAAGTGACACTCTTGGAGATAATGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91858	Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=taf12 PE=2 SV=1
Q16514	Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF12 PE=1 SV=1
Q8VE65	Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf12 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005618 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03847 all species →	TFIID_20kDa	Transcription initiation factor TFIID subunit A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003228 all species →	Domain	Transcription initiation factor TFIID subunit 12 domain	Interproscan
IPR009072 all species →	Homologous_superfamily	Histone-fold	Interproscan
IPR037794 all species →	Family	Transcription initiation factor TFIID subunit 12	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12264 all species →	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan
GO:0051123 all species →	Biological Process	RNA polymerase II preinitiation complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03126	TAF12; transcription initiation factor TFIID subunit 12	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.