Gene detail

Detailed information of ENSODKP00000028153.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047135916.1, nostrin-like [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000030293

ATATgccttctttaaaaaacaatatttgctgTCAATAAACTGAAATAGCGTCATCTTAGTTACAAGCATAATTTCTGTGATGAATAGTTCTTTCCGAAAGCCCTCACGACGGCTTTCTAAGAATTCAAATACAGTTGATGCTGGCGGCAACAATAGCAGTTCCAGTAATGAGaGTCATGCTGGATTTGACGATTTGAAAAAGTACTGtcataaaaacaatgaatttattcGTGATGTTTCACAGTTATTCCAAGAGAGGGCAAAGCTGGAACAACTCTATGCTGATGGACTTTCTAAAATTGCTTCAAAAGCTAAGAAAATTATCGGAGAGACTTTAGGAACAATGCGACAAACATGGGAAGACTTTGGTTCACAGGCTGAACAAGAGTCTTATTTGCACAAAGGTTTGGGTAACGATGTGcttgaagaaatttcaaaaccaCTGAGAGCATTTTCGGATCAACAAAAGGAGGCTCGAAAACCAGCAGAACAAGCAGTGGAGAAAgctttaaaatcatatattgaaagAAGAGCTAAAGAAGCGCAAGCCAAGAAGCTTGCATTTGTCAAGTCAAAAGAATCAGAAAATCTCACAGTGCAGTTGGAAGCAGGAAGGGCCAAAGCACTAACCGATAAAGAATTATCCAAGTTAGATGCgaaatgcaaaaaagctgaaGAGAGCGTTGCAAAAGCGGATGACGATTATATTTGTAAATTAGTAGAATCTGAACGAGCAAGGCTAACACTAGATAGTACAATACAAACTTCTACTCAGgcgcttcaaaaattggaagaagatagaattgaaaattttaaaaacttcttatcAAAGTTTTCCAATTTACTTCTCAATTCAACGCCAAAGCTAAAtgagATATTTATAACGTTAGAAAGTCAATCAAAAAATGTAAGCGTGGATTCAGATATCAGCACGATGGTGGAGACCAGAGGTTCAAAAAAACAGCCAGGGGAGCAAGTGTTATTCTCATGTTTTGAAGAAGACATGAATAACACAATGGACAACACACGGAGAAAACTTGCATTAGATAGTAAAGTTAGTAGGCTACAGCAATATCTGCTCGCTGAAAGAAAAGCTAGAAAAGGTTTGACGCGTTTGAATTCAGTATATTCTGATAACCCTCGCTTTAGCACTCTCTCTGGACAGCAAGATGTTGGCTTCCAGTTGTCTCACGCTACTTCAGTGATCAATTTGATCGAAGCTAGTATTTATCGTATGAGCAAAGCTGCTGCTTCAGTGGGCAATTACACAGCAAACAGTTACAGACTATCGAGTTATATCGAGGAGAGGAAGGACAAACAGGGAATATACCATTGCACACTTCGAGTTCCACTCGACTCAGCGGCATCACAAAATGTTGACGATGATGATTATATGCCATCGTTAGATACGAGGGCCACGGGAACGTATGATTACTCTGACGACGATTTTGACGATGTTGATCCGGAATTCGAAGATCATGTTGATGCTGCTCAACCGGCCTATCAAGCGATAGATCCTGATCAATATTGCATCGCCGATTACGAATACAGTGCCCAAGAAAACGACGAGTTGACGATACAGCCAGGcgacaaaattttgatattaacgcGTCATGATGACGGCTGGTGGAAAGGAGAATTAAACGGCAGGGCCGGCTTATTTCCATCATCCTATGTTCACgaaatatagttttatatttttaaatcgaATTTGTTAGGCTTCTAATGGGTAAAGAAAATCTTTGAAGTTGCATTGgtataactattttttcaatgaaactttacTTGCTTGAAAGCATGAATCTGAAATATTTCTATTGAATAAATTTTCTGGTTTTAGGGAGATTTCGGTTTTGGCAAACTTGCCAAACTGGCCAGAAAATGGCCAGAAATAGAGAATAGATAAAACCCGTTAAGAATGCTTGATGATATGCACGATGATATCCTGTGATAAATGTTCGTGAACAAGGCAACTTCGGTAAAAAGGTACAGTGCTTGTTCCAATTTAATAATGAACGGTTGATAGACATATGGAATATAGGTGAAGATGGCAAAAACATCAGCATTAAATCCGTCTTAAATATTTCTTCTCAGTATAACCTTGACTACTTCCAATGAGTTATTTgagtttcagaattttcataaataatttccaAGACACGATTAATAGTATCTGCTACTAACGTATTAAGGTAAATGCAAGTGGTGATGTGAACTTCTATGTAGTCTCATTTAATGAGAGTGTTCTATAAATCTTTTCTAAGTAGTATGCAGTTGAAGTAGAGACAATTTTCATAGATACAGTAGATACAGTTAGCACACTGAATTAATCATTCATTTGGGTATACAAGAGCatgaaatgcagaagcagccccCTAAAACTGTTTTGGAAACTAAGTAAGCATTTTCTATAATTAATTGCCCTCCCCCTCAACTTCCAAGTTCCGAATAATAATTTCCTTATTAGAGGGACTTTGACcgtaaaactttctgactttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O42287	Intersectin-1 OS=Xenopus laevis OX=8355 GN=itsn1 PE=1 SV=2
A0A0K3AV08	Mitogen-activated protein kinase kinase kinase mlk-1 OS=Caenorhabditis elegans OX=6239 GN=mlk-1 PE=1 SV=1
Q15811	Intersectin-1 OS=Homo sapiens OX=9606 GN=ITSN1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005407 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00611 all species →	FCH	Fes/CIP4, and EFC/F-BAR homology domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR001060 all species →	Domain	FCH domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR031160 all species →	Domain	F-BAR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23065 all species →	PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20126	NOSTRIN; nostrin	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.