Genomic Location: :...
NR annotation: XP_047137083.1, SCO-spondin isoform X1 [Hydra vulgaris]
| CDS | ||||
| ENSODKT00000031087 | ||||
| Transcript |
| ENSODKT00000031087 |
| Protein |
| ENSODKP00000028899.1 |
| Uniprot term | Description |
|---|---|
| Q2PC93 | SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1 |
| P04275 | von Willebrand factor OS=Homo sapiens OX=9606 GN=VWF PE=1 SV=4 |
| Q28295 | von Willebrand factor OS=Canis lupus familiaris OX=9615 GN=VWF PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00094 | VWD | von Willebrand factor type D domain | Domain | Interproscan |
| PF08742 | C8 | C8 domain | Domain | Interproscan |
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF01826 | TIL | Trypsin Inhibitor like cysteine rich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR014853 | Domain | VWF/SSPO/Zonadhesin-like, cysteine-rich domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR036084 | Homologous_superfamily | Serine protease inhibitor-like superfamily | Interproscan |
| IPR006207 | Domain | Cystine knot, C-terminal | Interproscan |
| IPR001007 | Domain | VWFC domain | Interproscan |
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR001846 | Domain | von Willebrand factor, type D domain | Interproscan |
| IPR050780 | Family | Mucin/von Willebrand/Thrombospondin superfamily | Interproscan |
| IPR002919 | Domain | Trypsin Inhibitor-like, cysteine rich domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11339 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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