Gene detail

Detailed information of ENSODKP00000029351.1 in Millepora complanata

Genomic Location: chr4:13524275...13596185
NR annotation: XP_012562837.1, chondroitin sulfate glucuronyltransferase [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSODKT00000031569

atgataattgaaaataaaaataatttgaatagtATGAGAAGAACAATGCGCTTTAAATCGTTTATTCCATTGTTCATTGGTGTAGTGAttggtttttgtttgtcttttgtgTTTATGCCGCCTCCAGATCTTCACTGTGacattgtaaaaaaatcaaatattaaaccatccTCACGCCAGACCCTAGAGAGGAACACGAAAGATAAGCCATCATCAACAAAGTTACCTCAATCAGATCCTGAACCAGTCAAACCAAAAGACAGTCATTTTAATTATGACTTTAGACCATACTTCGTTTATAGCGAGTTAGGCTTCCATTTTCAAGTAATTGTTGCAGTAATTACAAGTGAGGCGCAGCTACTGAACTATGGTGTTGCAATTAATAATACATGGTTGCAAAACCTTCCAAAGGTTTTGTTTTTCACTCCTTATtccaaaaatgcaaattttcatgaACGTTTCAACACCCACCTTAATTTAAATGTTATTCAGCTACCAGATATTTTGGAGGATTCTCTTCACATTGAAATAACTTTACGTGTGTTACAGTATTTGAAAGAGCATTATATAAACACCTACAATTGGTTTATGGTCATCCATGATCAGGCGTATGTTAATACAGAAAATACAATGAGGTTCTTAAAATCATTGAATTCCTCAACAGATATATTTCTTGGCCATCCCAAAGAGTTTCAGAATTTGAATCCTGCCATATCTTTACCAAATGGAGGTGTACTTAATAGTTACTGTGATGATAAAACTGGAATTATATTAAGTcgcaatattttgttaaaattagatcaGTTCACTGTTGCAAACTTAAAAACTAGAGACAATCCTGCAATTTTGttagcaaaaacaatatttttgagtaCTGGTGCTGAATGTATCAATGATCAAAGTatgcaaaaattgttttatcagcgGCAACAGAAGGACACGTTTTCTGCGTACAATCTCAAGTACAAAGGTGAATTATCCAATGCATTAGTTTTGTACCCAGTTGCCAGTTCGAAGCAGATGTTGGAAATTCATCGCCATTTTACGTTGCCACTCCTGCAGCAGGCATATGATGGAATACACCAGTTACAGGGAAACATCAAGGAATTACAGGAAAAAATCCCGGAAGATGTTCCTGAAAAAACCCTTCATTGGCCTGTTGGGTTTACGGCACCATTTAAACCATCCAGTAGATTTGAAGTTATTCAGTGGACATATTTtgataacaagaatttatatggTTACACAGATGTTGAACCCGTTTCCAACTTTAGCGCTGCAAACAGGAAAGATGTTAATGATATCATGAATATAGTGAAGCAAGCCATTCAAAGGGAATATGGTCACTCTAACGAATATAATTTTAGGTTGATGAATGGATACAGGCGACTCGATCCTCAAAGAGGAGCAGAGTATATCATAGACTTAGAAAAAAGTCACAGAAAGAGGGATATTTCGGAGACAAAGCGGGTCTACTTGTTACGTCCTTTTACTAAACTTGAAGCGTTACCAATGCCAGCTGCAACGGAACAAAAAGGAATACATTTGGTACTGCCAGAGATATCACAGTATGAGCGTTTTCTTCAAATGTACAAACGTGTATGTTTACAAACTGGAGAAAATGTCGTGCTGCTAACTGTATTCATCAATATTCGAGTTGGTCAATTTGAAGGGGAGGACAAAGAAGATCCATTCATTGAATCAAAAAATCTAATTGCAAGATACAAGCACTCATATATGTGGGCTCAATTACCATGGTTGCAAGTGGGTGTAAAAAATGTGTCACCAGTATTAGTAATGGATATTGTATCAATGAAATTACCATCAAATGCGCTGATACTTATAGTGAGTTTATCCACGGACTTCACTACGAATTTTATGAACAGATGTCGAGTGAACGTAGTCAGTGGTGCACAGGTGTTTTTTCCGATTCCGTTTGCTGAGTACAATCCACAGTTAGTTTACAAGACAAAGCAAAAGCCAACTTTTGTAGAAGTGCATCGAAATAACGGGTTTTGGGATCGTTTGGATAGTACCACtgcttgttttaataacaaagattACAAAGACATCCGAATGTTAAAGGatgattttttagatgaaaatcagTCTGCTAAACGCACACTTTTAGATGTATTCAATGAATCCAAATTGCAAGTTTTCCGTGCAGTCGATGCCGAATTGCGAGAGAGGTACAGAGCTACAGCGTGCTCCAAGAATGAAAACGTAACGTTTTATCGCGCGTGCACTCAAAATGCTGGACAAAGACTTGGATCGCGAGCTCAATTAGCGCAACTACTTTTCCAAAACGAAAGGTTTGCATCATGA

Transcript

ENSODKT00000031569

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6IQX7	Chondroitin sulfate synthase 2 OS=Mus musculus OX=10090 GN=Chpf PE=1 SV=1
Q8IZ52	Chondroitin sulfate synthase 2 OS=Homo sapiens OX=9606 GN=CHPF PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007883 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05679 all species →	CHGN	Chondroitin N-acetylgalactosaminyltransferase	Family	Interproscan
PF02434 all species →	Fringe	Fringe-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051227 all species →	Family	Chondroitin sulfate glycosyltransferase	Interproscan
IPR008428 all species →	Family	Chondroitin N-acetylgalactosaminyltransferase	Interproscan
IPR003378 all species →	Domain	Fringe-like, glycosyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12369 all species →	CHONDROITIN SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008376 all species →	Molecular Function	acetylgalactosaminyltransferase activity	Interproscan
GO:0030206 all species →	Biological Process	chondroitin sulfate biosynthetic process	Interproscan
GO:0047238 all species →	Molecular Function	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Interproscan
GO:0032580 all species →	Cellular Component	Golgi cisterna membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000029351.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.