Gene detail

Detailed information of ENSODKP00000029891.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_002167200.3, proteoglycan 4 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000032141

ATGAAAACAAAAGCTCACTTTCGACTGATAGTGGCATTAATTTGCTCGCTGAAACTTGTAAAGTCTGCTGACAAGCCGTTCACGGCGCAGGTTGTGGAGaatattgtgaaaaatgaaaTAGCAAGGAAGATGCCAGCTGCAGTTAATCACAAAAAATCAATGACAGGTATACATTTAAAGGAGGCCACTGATGCTATCAATAAGCTGGTGGATGAGAGCATAGttgACAGGGTTCAAGAAGCAGAGAAGGAAGTTTCACAGATGCTACTGAAAAGCATAGAGCGCCACATACAAGATGCTGGAAAAGTTCTCCTGAAGCAAGACGAAAaTACTTGCAAAGATAAGATTGAAAGTTGTGATAAACTTAAAGAAGGTGGTGTATGCGAGTCGTCCAAAGATGCGATGGTGGTCAACTGTCCTGCAACTTGCAATTTCTGTGGAATTTTAGACAATATGAAAGCTGCTAAAGCAGAGGAGAAGaaacaagaaaaggaaaaagaaacaaaacaagaaaaagaagaattgcAAACAATGGAAAATGAAGACAAGAAAGAAGAGGAACTAGCTGAAAAGCTAGAAGAAGATATGGAGAATGTAACATCGAAAAACGCcgctgaaaacacaaaaaatgataacaaaactaaaaaagataaaaagcgtAAGagcaaaaatctatttaaagttaaaacagcaAACCTCATTCCTGAGGAGGTACGTTTGATACATCAAAATATGGTTGATCAAGCTCTCGATCATTCTAATTTGCCTTTGGCTGTTAGCACAAGCCCAATGGAAGTTGATCCACTCACTGGAAAAACATACTTATCAGTCAAAGATGATGGAAAACATGACACAGGACAAGGAAGAGATGAAGCGCCAAgggaagaacaaaaagaagaaacagaacttgaaaatgaagaagcaatagcaaaagaaaaaaaagaaaaggaagttCAAGAGCGTAAAAAAAAAGagctgaaagaaaaacaaatacaagaggaaaaagaaagagaaagaaaagaaaaagaagaaagagaaagagcaaaaaaagaaaaggaagaaaaaagaaaagccgAGGAACGCAAAGCAAAGGAACTTGAAAAAGAACGCAAAGCCTTAGAGGCTAAACGCAAGAAAGTTCTTAGGAAAACAAAAGCATATCTTTCGACCAAACATGCACCAGCTAATTCAGGACACTCATCAAAGAAGTGTCATCCACTGTGCCTCCACATTTGTATACCTTCATGTGCTATCGGCTGCTGTGTtgcaaagaaaactaaaatgaaaagcACAAAGGTGAAACCCAAATCAAGTGAAAAATGTCATCCAATGtgtaaaagATTATGTTTACCATCCTGCGGAAAAGGATGTTGCGCACCTGGTGTGAAGCCTACCCCACATGAAAAAGAGGGTCTATGTCCTCCAGGATGCCCTCTAGAATGTGCACCGCAGTGTCTCGACAGTTGCTGCTTTAAAAGTGAAATGGCTAAACCACTACAACCACCGTTACCACCACCACCGCAAATTCCATCAGCGCCACAACTACTTCAGCAACAGCAAATGATGCCTCTGTCGCCTCCAGTTCCAATGTTACCCATGAATACTCCTAATGCAGTCTCACTTACACCTGAAGTTCTTCCCGTATGTTTTGGAAGTTGTGTAAATGCATGTGATGCAGCATGTCCTGCTAGTTGCTGTCCGAGCAATATGGAACCCCTACAAACTAGTGTTCACACTCTTAGATGCCCGTCTCCATGTCCACAGTCTTGTGGCCCAGCATGTCAACCAGCGTGCTGTTCTGCATATTCAAAACAACCTGCACCAGCTCCTagaccaccaccaccaccatcacGTCCACCTCCTCCACCACCTCCTCCTCCCCCACCTCCAGCCATGCTTCTTCCAGCTCCATTTGATACATGTCCAGGAACGTGTCCCCAAACATGTGCACCTGGCTGTGATTTTGATTGTTGCCGTCCCTTTCTCGATCCTACCATAGTTCAACAAATGCAGCAGCAGCTCATGCCACCTGCACCACCGGTTCAGGCTATGGCTCCAGTGTCATTTTTGCCACCTCCACCACCACCGCCACCTCCTCCACCAcctccaccaccaccactaccgCCACCTGTAcaaccagtgacaaaaattattcatATACAACATGTATTTacaccagaaaaaactccatcagTAAGTGAGACACCAGCACAGTGTCCTTCAGAATGTCAGCAACATTGTGGACCAGCATGTGCCAGGGATGGATGTTGTActgataaaaagagaaaaagaaatgaaacgcCTAAAGCTCCCATTCAGAGTGTCTTACTGAGAAAAGCATAA

Transcript

ENSODKT00000032141

TTGAATTTGATTAACACAATCTTGAGTATAGTAGAATGAAAAAGTAGaagctattttgattttttattataaaagttttggaaaatttttccaataagaggagtcaaaattgtttgttgaacaaattattttattaaaaggactATTCATAAGATGTACTTGTTATTCGAAAATATGGTTTAGCGTATTGTGGATCCCGCTGCCTGCGGCTTTTATTTAGTTCTATCCACAAATATTATTATCAAATAGAAAGACTTTGTAAGCATGAAAACAAAAGCTCACTTTCGACTGATAGTGGCATTAATTTGCTCGCTGAAACTTGTAAAGTCTGCTGACAAGCCGTTCACGGCGCAGGTTGTGGAGaatattgtgaaaaatgaaaTAGCAAGGAAGATGCCAGCTGCAGTTAATCACAAAAAATCAATGACAGGTATACATTTAAAGGAGGCCACTGATGCTATCAATAAGCTGGTGGATGAGAGCATAGttgACAGGGTTCAAGAAGCAGAGAAGGAAGTTTCACAGATGCTACTGAAAAGCATAGAGCGCCACATACAAGATGCTGGAAAAGTTCTCCTGAAGCAAGACGAAAaTACTTGCAAAGATAAGATTGAAAGTTGTGATAAACTTAAAGAAGGTGGTGTATGCGAGTCGTCCAAAGATGCGATGGTGGTCAACTGTCCTGCAACTTGCAATTTCTGTGGAATTTTAGACAATATGAAAGCTGCTAAAGCAGAGGAGAAGaaacaagaaaaggaaaaagaaacaaaacaagaaaaagaagaattgcAAACAATGGAAAATGAAGACAAGAAAGAAGAGGAACTAGCTGAAAAGCTAGAAGAAGATATGGAGAATGTAACATCGAAAAACGCcgctgaaaacacaaaaaatgataacaaaactaaaaaagataaaaagcgtAAGagcaaaaatctatttaaagttaaaacagcaAACCTCATTCCTGAGGAGGTACGTTTGATACATCAAAATATGGTTGATCAAGCTCTCGATCATTCTAATTTGCCTTTGGCTGTTAGCACAAGCCCAATGGAAGTTGATCCACTCACTGGAAAAACATACTTATCAGTCAAAGATGATGGAAAACATGACACAGGACAAGGAAGAGATGAAGCGCCAAgggaagaacaaaaagaagaaacagaacttgaaaatgaagaagcaatagcaaaagaaaaaaaagaaaaggaagttCAAGAGCGTAAAAAAAAAGagctgaaagaaaaacaaatacaagaggaaaaagaaagagaaagaaaagaaaaagaagaaagagaaagagcaaaaaaagaaaaggaagaaaaaagaaaagccgAGGAACGCAAAGCAAAGGAACTTGAAAAAGAACGCAAAGCCTTAGAGGCTAAACGCAAGAAAGTTCTTAGGAAAACAAAAGCATATCTTTCGACCAAACATGCACCAGCTAATTCAGGACACTCATCAAAGAAGTGTCATCCACTGTGCCTCCACATTTGTATACCTTCATGTGCTATCGGCTGCTGTGTtgcaaagaaaactaaaatgaaaagcACAAAGGTGAAACCCAAATCAAGTGAAAAATGTCATCCAATGtgtaaaagATTATGTTTACCATCCTGCGGAAAAGGATGTTGCGCACCTGGTGTGAAGCCTACCCCACATGAAAAAGAGGGTCTATGTCCTCCAGGATGCCCTCTAGAATGTGCACCGCAGTGTCTCGACAGTTGCTGCTTTAAAAGTGAAATGGCTAAACCACTACAACCACCGTTACCACCACCACCGCAAATTCCATCAGCGCCACAACTACTTCAGCAACAGCAAATGATGCCTCTGTCGCCTCCAGTTCCAATGTTACCCATGAATACTCCTAATGCAGTCTCACTTACACCTGAAGTTCTTCCCGTATGTTTTGGAAGTTGTGTAAATGCATGTGATGCAGCATGTCCTGCTAGTTGCTGTCCGAGCAATATGGAACCCCTACAAACTAGTGTTCACACTCTTAGATGCCCGTCTCCATGTCCACAGTCTTGTGGCCCAGCATGTCAACCAGCGTGCTGTTCTGCATATTCAAAACAACCTGCACCAGCTCCTagaccaccaccaccaccatcacGTCCACCTCCTCCACCACCTCCTCCTCCCCCACCTCCAGCCATGCTTCTTCCAGCTCCATTTGATACATGTCCAGGAACGTGTCCCCAAACATGTGCACCTGGCTGTGATTTTGATTGTTGCCGTCCCTTTCTCGATCCTACCATAGTTCAACAAATGCAGCAGCAGCTCATGCCACCTGCACCACCGGTTCAGGCTATGGCTCCAGTGTCATTTTTGCCACCTCCACCACCACCGCCACCTCCTCCACCAcctccaccaccaccactaccgCCACCTGTAcaaccagtgacaaaaattattcatATACAACATGTATTTacaccagaaaaaactccatcagTAAGTGAGACACCAGCACAGTGTCCTTCAGAATGTCAGCAACATTGTGGACCAGCATGTGCCAGGGATGGATGTTGTActgataaaaagagaaaaagaaatgaaacgcCTAAAGCTCCCATTCAGAGTGTCTTACTGAGAAAAGCATAAGGTTGTTATCAATGATGATTAAGCAAGTGCTAATCTCTTCAAATGGTATCATAAAATGCAAAACATAAAGCTATTACAAACATACACACCTACAGCATGAACCAAAAGTTTAAGTTAAAGCAGCTCCATAAATGGAATGACAGTAAAGTTTGTAGGTAAAGGAATGGGAATTGAAATTGATCAATATGAAAATGAATAACTTTTCCTAAAacaatatgttttgatgaaaataatgcataataagcaaaaaaagactattttaagTAAATCCATAAACTAATGAATTTGGTGGTATTTTGTGTTTtgtgcaaattaatttttttatttttgaatgccACAGAATTTGATTAGAATTTTTGTACATCGAAAGACTTACATACTATTCGTATTTGAGCTCAGGAAACGGTTCCATGCAGGAAATATGCGGAATAAAACGC

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007082 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSODKP00000029891.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR043197 all species →	Family	Plakin	Interproscan
IPR003582 all species →	Domain	ShKT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23169 all species →	ENVOPLAKIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0005200 all species →	Molecular Function	structural constituent of cytoskeleton	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005882 all species →	Cellular Component	intermediate filament	Interproscan
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan
GO:0008307 all species →	Molecular Function	structural constituent of muscle	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030056 all species →	Cellular Component	hemidesmosome	Interproscan
GO:0030506 all species →	Molecular Function	ankyrin binding	Interproscan
GO:0031581 all species →	Biological Process	hemidesmosome assembly	Interproscan
GO:0042060 all species →	Biological Process	wound healing	Interproscan
GO:0042383 all species →	Cellular Component	sarcolemma	Interproscan
GO:0045104 all species →	Biological Process	intermediate filament cytoskeleton organization	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0048471 all species →	Cellular Component	perinuclear region of cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSODKP00000029891.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.