Detailed information of ENSODKP00000030079.1 in Millepora complanata

Genomic Location: chr5:55552501...55557908
NR annotation: XP_002170688.4, 2',5'-phosphodiesterase 12 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6AXQ52',5'-phosphodiesterase 12 OS=Rattus norvegicus OX=10116 GN=Pde12 PE=2 SV=1
Q3TIU42',5'-phosphodiesterase 12 OS=Mus musculus OX=10090 GN=Pde12 PE=1 SV=2
Q08DF72',5'-phosphodiesterase 12 OS=Bos taurus OX=9913 GN=PDE12 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006892 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21171
all species →		PDE12-like_N2',5'-phosphodiesterase 12-like, N-terminal domainDomainInterproscan
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048821
all species →		Domain2',5'-phosphodiesterase 12-like, N-terminal domainInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR050410
all species →		FamilyCCR4/nocturin mRNA turnover and transcriptionInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12121
all species →		CARBON CATABOLITE REPRESSOR PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000288
all species →		Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSODKP00000030079.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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