Gene detail

Detailed information of ENSODKP00000030462.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_047137238.1, CLIP-associating protein 1 isoform X6 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

ENSODKT00000032746

ATGTATGCTAACGAGCATgcatattttcaccattcttcCACGATTAAACGCAATCAGAACGATGATAATGATAGTACTTATTCATCACTGATTTGTTCACTAGAATCGCAAAGTCTATCCTTATCAGAAGATATTTCTAAGGACTATGAAGAGATCTTGCTACTTTTACAACACGATTCTACGACATCAAAACGAGATGGATTGGTTTCATTTCAATCGTTTTTGCACGGAATGAATTCGATGATGCCTTCCGAAAtcgttaaaataaaagaaatatttaatcgttattttgcagaacagaatTCGAAAATCTACAGTTTGTTCTTGGATACAGTTAGTGAGTTTATTGTCCaatataaatatgatttacaAGATTGGTTATTTGTTTTGTTGACTCGACTCCTACAACGAATATCCACTGATATTTTACCGTCATCACAAACAAAGATCGCAAGAGTTCTCGATGTTGTCAGGGATTCGTTTCCATACGACCAACAGTTTCAAATCATCACCAAATATGTCACAGATAATACCCAGACGCCCACTCTCAAGATGAAGGTGGCTCTCTTGCAATATATGTTGGGGTTAATAGGCTCAATGGATGCTAGTGATTTTGTCAACAGTGGACCTATACGATTGGCGGTCTCCAGAATTATCACATGGATATCCGAGCCAAAAAGTGCAGATGTTCGAAAGGAAGCAGCTGCTGTAATTTTCGCTCTGTTCCAGTTAAATACACCAGAGTTCAGTGCAATGCTTTCAAATGTTCCAAATTCGATTCAGGAGGGAGCAACGCGTGTGATACAGATGAATTTAAAACAAGATGCGATGAAGCAACCACAATCCCAAACGCAGCACGAAACTATGACCAACGACTATACACAATACTCGCAACAAAATAAACAATCAGCAAGATCCCCAGTAAAGCCACACAGTAGACATTACACAAGAGAGGAACCTGTTTCAACACCAGTAGTCCGATCACATAGTAGACAAGATAATTTAGAAGGTGCAGAAACATCTCCAACTTCAAAAATACCTATTCGGCATAAACTATCATTTGATGGGGGTGAGTTTCATTCGCCACATAGTAATGGTATAACCCCATCTGTTTCAACTCCTTACACCCACGATACCCATTACAATGCGGATAATTCACCAGTATGGTTATCACAAACGAAAATGGCAAATTATAATCCGAGACAATATGAAGATTCGTTAATTGATACTCGTAGAGGTTCTCACGACGGTTCGTTTACAAGCAGCGATATAAATCGTGTGGCGGATGGTGCAGAACAGGCAGATATAGAAGAAAATATGACTGGTTCggtaaatttagtaaatcaagtatttacTGTATTATCTGGTCCGCAAAATTCCTCAGATTCAGAAGACATAAAAAGTGCACTATTGGAGTTGCTCAGATTGATTCGATCTGGGAGTAAGCAGTTAGTAGGACCacgaatgaaaacatttttaccgCTGGTGCTGGACTTACTTAAACATAAAGAGgCTACCATCCGATGCTTAGCGGCACGTGCCTTACGAGAGATTGCTGCATCACATCCCGATACATATAAAAGAGATTTGCAGGCCTTCATTTTACCACTTCTTGAAACAGAGGCTGATTCTCAAAAAGAgGTAGCGAAAACAGCAGAAGAATGCTGCTCATTAGTCAGCCAGAACCTTCATCCAAACGAAGTGTTTCCAGTCGTAGCACCCTTAGCTGGAGTGGCTGAGTATCCAACTAACGTGTCTGCTATCAAAATGTTGCAATCGGTTGTTGCAACGTGTGATGCACATACTATGACATCAAATTTGAACACTGTAGTACCAAACTTATTAAAAGCGTATGACCACCCTGAGAGCAGTGCTCGTAAGGCAGCTGTTTTTTGCTTAGTAGCAATTCACAACATTGCAGGTGGCGAGAACGTCAACCCATATTTTAAGCAGCTAGCAGGTTCCAAGATGAAATTGCTCAATTTATATATTCGACGATCGCAATCAACGAACGTGTAA

Transcript

ENSODKT00000032746

AAACAACAACCAGAAATTACTAGTTTCAATAATTTCCCAAGGAGTAAATCAGAAGTTGATTTAGCACTGTTGCGAAATAAGAGTAATGAAAAAAGGAGTTCTTCCTACTCAAGGTCGAGAGTCGTTCTTGCCTCAGACTCTATAGATCGTTTGAATGTTATGTATGCTAACGAGCATgcatattttcaccattcttcCACGATTAAACGCAATCAGAACGATGATAATGATAGTACTTATTCATCACTGATTTGTTCACTAGAATCGCAAAGTCTATCCTTATCAGAAGATATTTCTAAGGACTATGAAGAGATCTTGCTACTTTTACAACACGATTCTACGACATCAAAACGAGATGGATTGGTTTCATTTCAATCGTTTTTGCACGGAATGAATTCGATGATGCCTTCCGAAAtcgttaaaataaaagaaatatttaatcgttattttgcagaacagaatTCGAAAATCTACAGTTTGTTCTTGGATACAGTTAGTGAGTTTATTGTCCaatataaatatgatttacaAGATTGGTTATTTGTTTTGTTGACTCGACTCCTACAACGAATATCCACTGATATTTTACCGTCATCACAAACAAAGATCGCAAGAGTTCTCGATGTTGTCAGGGATTCGTTTCCATACGACCAACAGTTTCAAATCATCACCAAATATGTCACAGATAATACCCAGACGCCCACTCTCAAGATGAAGGTGGCTCTCTTGCAATATATGTTGGGGTTAATAGGCTCAATGGATGCTAGTGATTTTGTCAACAGTGGACCTATACGATTGGCGGTCTCCAGAATTATCACATGGATATCCGAGCCAAAAAGTGCAGATGTTCGAAAGGAAGCAGCTGCTGTAATTTTCGCTCTGTTCCAGTTAAATACACCAGAGTTCAGTGCAATGCTTTCAAATGTTCCAAATTCGATTCAGGAGGGAGCAACGCGTGTGATACAGATGAATTTAAAACAAGATGCGATGAAGCAACCACAATCCCAAACGCAGCACGAAACTATGACCAACGACTATACACAATACTCGCAACAAAATAAACAATCAGCAAGATCCCCAGTAAAGCCACACAGTAGACATTACACAAGAGAGGAACCTGTTTCAACACCAGTAGTCCGATCACATAGTAGACAAGATAATTTAGAAGGTGCAGAAACATCTCCAACTTCAAAAATACCTATTCGGCATAAACTATCATTTGATGGGGGTGAGTTTCATTCGCCACATAGTAATGGTATAACCCCATCTGTTTCAACTCCTTACACCCACGATACCCATTACAATGCGGATAATTCACCAGTATGGTTATCACAAACGAAAATGGCAAATTATAATCCGAGACAATATGAAGATTCGTTAATTGATACTCGTAGAGGTTCTCACGACGGTTCGTTTACAAGCAGCGATATAAATCGTGTGGCGGATGGTGCAGAACAGGCAGATATAGAAGAAAATATGACTGGTTCggtaaatttagtaaatcaagtatttacTGTATTATCTGGTCCGCAAAATTCCTCAGATTCAGAAGACATAAAAAGTGCACTATTGGAGTTGCTCAGATTGATTCGATCTGGGAGTAAGCAGTTAGTAGGACCacgaatgaaaacatttttaccgCTGGTGCTGGACTTACTTAAACATAAAGAGgCTACCATCCGATGCTTAGCGGCACGTGCCTTACGAGAGATTGCTGCATCACATCCCGATACATATAAAAGAGATTTGCAGGCCTTCATTTTACCACTTCTTGAAACAGAGGCTGATTCTCAAAAAGAgGTAGCGAAAACAGCAGAAGAATGCTGCTCATTAGTCAGCCAGAACCTTCATCCAAACGAAGTGTTTCCAGTCGTAGCACCCTTAGCTGGAGTGGCTGAGTATCCAACTAACGTGTCTGCTATCAAAATGTTGCAATCGGTTGTTGCAACGTGTGATGCACATACTATGACATCAAATTTGAACACTGTAGTACCAAACTTATTAAAAGCGTATGACCACCCTGAGAGCAGTGCTCGTAAGGCAGCTGTTTTTTGCTTAGTAGCAATTCACAACATTGCAGGTGGCGAGAACGTCAACCCATATTTTAAGCAGCTAGCAGGTTCCAAGATGAAATTGCTCAATTTATATATTCGACGATCGCAATCAACGAACGTGTAAAGCACTATCAATAGTAGGAGTTAATAGGAGGCCATTCAGGGCGAGTAATCATTCGAAATATTCAACTAAGCCGAAACTTCTTCACAGTGTAGAATAGGGCGAATTGAGAATCATATTTTGATCGAATTGATATGACAGTAGAGATCAGGAAGAATCAAGTCATGTAAATTTATCGAAACAGTCGCTGCTATTATAAAATACCTATGAAAGAATATATATGAACGGCGTTTAGGCATTGCGAGTAAGATCACCATCGCTTAAAGCACCCACTAAAGCTTTCGCTCCCCAGtaaaaagacaagaaaatattaaagtgacAATGTAATTAAAGGAAATAGAAATGAAGACCTTTCATTAGCTCTCGTGTTATAAGTTCGCGGAAATATATCAAACAAACCTTGTGGAGGAGCATGCACAATATCTTCAACTGTAAATGTGAACTCTACCATGGTTtcttataattgtttttattgaattatgtTTCCTAAAGTAAAACATGAGTTTCGAATGCATGCTATTTTATCAAAGGCAAGCCCTAGGAATCACTGTATAAACTTTCAATGCCCAAATCCCATACACAAATCAAGGGGAATTGAAAAAAAGCTCTCGAATTTCAAAGAccctgaaattaataaaaatgtggaaaatttaGTATTCTACCAAAAACGTAGGAATAACAGTAATATTGTTTTCGTTACGCGCTATGTCGTCATAAAGGGAGTTAAGTCCGTTTGATACTATGCGGCACCTATGGGCATTAAAGGTTTAATCGCCATCTTTATTATGGACtttacccagctaatatttactcaTTCAAAGTCagtaacagaaacactagaaaaaggtgcgaaatatgttcaaagttaacaataaaagcaccagaacgacatcattgacgtcgttctggtgtttttattgtttatttggaacacatttcgcaccattttcta

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1A5K2	CLIP-associating protein 1-B OS=Xenopus laevis OX=8355 GN=clasp1b PE=1 SV=1
A1A5G0	CLIP-associating protein 1 OS=Xenopus tropicalis OX=8364 GN=clasp1 PE=1 SV=1
Q4U0G1	CLIP-associating protein 1-A OS=Xenopus laevis OX=8355 GN=clasp1-a PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001513 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02985 all species →	HEAT	HEAT repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034085 all species →	Domain	TOG domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR000357 all species →	Repeat	HEAT repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21567 all species →	CLASP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0005815 all species →	Cellular Component	microtubule organizing center	Interproscan
GO:0005876 all species →	Cellular Component	spindle microtubule	Interproscan
GO:0005881 all species →	Cellular Component	cytoplasmic microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0040001 all species →	Biological Process	establishment of mitotic spindle localization	Interproscan
GO:0045180 all species →	Cellular Component	basal cortex	Interproscan
GO:0072686 all species →	Cellular Component	mitotic spindle	Interproscan
GO:0090307 all species →	Biological Process	mitotic spindle assembly	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16578	CLASP1_2; CLIP-associating protein 1/2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.