Gene detail

Detailed information of ENSODKP00000031402.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_002161134.1, vacuolar-sorting protein SNF8 [Hydra vulgaris]
Species Millepora complanata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96H20	Vacuolar-sorting protein SNF8 OS=Homo sapiens OX=9606 GN=SNF8 PE=1 SV=1
Q9CZ28	Vacuolar-sorting protein SNF8 OS=Mus musculus OX=10090 GN=Snf8 PE=1 SV=1
Q5RK19	Vacuolar-sorting protein SNF8 OS=Rattus norvegicus OX=10116 GN=Snf8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007326 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04157 all species →	EAP30	EAP30/Vps36 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR016689 all species →	Family	ESCRT-2 complex, Snf8	Interproscan
IPR040608 all species →	Family	Snf8/Vps36 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12806 all species →	EAP30 SUBUNIT OF ELL COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000814 all species →	Cellular Component	ESCRT II complex	Interproscan
GO:0071985 all species →	Biological Process	multivesicular body sorting pathway	Interproscan
GO:0043328 all species →	Biological Process	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12188	SNF8, EAP30; ESCRT-II complex subunit VPS22	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.