Gene detail

Detailed information of ENSODKP00000032562.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_012555897.2, cyclic AMP-dependent transcription factor ATF-6 beta isoform X1 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000034992

GCTCGACTGACCGTGGATGTTCTGCTGGTAGTAGCCCAACGGTAGCCAGTCGCCTTTGAGAGTGTATAAGGCTCGGAGTTTTGTAAAGAGATAAAAGCAGAGATGATGATATCAAACCAACTGTTACAGTTTACAAATTCTGAGAAGAGCTTCTTTGAAGATAATCTGCTTGATGCAGAAGATTGGGgcacaGACCTTGATTTACCCTATGGAAATATCAACTCCAGTCCATCATCTTCCAATGGTTCAGAGCAGTTTGATGATTGTAATTACAATCCCCAGTCTTGGTTATTGAGCAGAGAAGATACAGAAACATGGTTAAACCAGTGTTCTCCAATGGAATCACCAAAATCTGATCACTCTCCTGCAATCAAGGAAGAACCTCCATCACCACCAAAATCTAATATCAGTGAAATTCTGTCAGCTCTGGTAGATGATAATTCACCAAGTGAAATTATATCAAAACCAATCAATGCCTCTAAAGCTGAAGTGAGTGAAGTTGCAATGCAATCACATCTGTCCTATACAGCAAAAAGTAAACGTCATATCTCAAATCCGACCCTTTCAAAAActaatgacattaaaaaaataaattctcatGACACACTAAAACTTCTACAGAAAACATTTCTTCAAGAAAATCCAAAGGCACTTAGACCAGCTTGTAGCCAGAGTACTGCAAcaacttttccaaataaattaaaatcaattgaacccaaaaaaaatattattattcaaaatgtaAAACCAACGTTTTCATGCTCAGGTGGTGTATTAGTGGCATCAACGGATATCAAACCTACTGTATCATCTTTTCCAACAACTGCAATGGCaccaaaagttgtaaaattagAGAATGGACAGTATTATGTTCCTCCTTCGATAACGACACCAGTAAACAAGCACCAgGTTAGCATGAGCAAACCTCTACTGAAAAGACCAGCGAGTATCAATATAGAGAACTTACTGGCAGAAGCAAAAAACTTTGCTGAGaaCAAAGAGCTCCGAGAACAACCTTCAAAACCACTGAAAGTGAATGCAAAGAAAACCACGCTACTACTGGCTGTTTTACTCATATTTGCTTTCCACTCATTCAGGTCGAACGATGATCAGTCACTACAAAAACATCTTGGCTCTTTCTCCAAACCATATATTCATCGTGGTCGATCACTTTTACAGTTTGACAAttcaaatatcaataattatgAGTCATTAATGGAACAAGAATATCAGTATGATGCTGCTAGAGATATTTTTAATACAGACAAGACAAAAGAAATTCTGCGAATGATGCGGAGGAATAAActgaaaaagtttaatgaagaaaaatttccTTCATTTGATGTGAACAATGATATTGATAGCGACTGTGGGGGGCAGTATAATCAGTCTCACTTAACCAGAATCAACAAGGATCTTGAGGGGTTAGCGAATGGTTTTCACAAAGGAAAGAATAAATCAAGGAAGAAAAAGTCGTTGAATAACttggCAGTCCTCAATTCGACACATGTTAGAGAAAGTGAACATAACTGCAGCCAAACAGACAAAAAATCTTTACGGCGACATTTGACCACAGCTTCTTATGTCAAATTTGTCAGATCaccagaaaaactaaagaaacctTTTCCACAGCAACGACTACCGAGAAATGGCATTATGAACAGTGGTCATCAGCGAAGTGCCGACTCAAATAGTAATTCCTCCCAAGAATTAGCAAATCTCATTCAGAAATCAATTATAAGAAAACCGGACACCTTTTATGTGGTGTCATTACTTCAGGACATGTTGATATTACCTGCAACAAATTTTAGTAGCAAACAGCCTCCGAAAGTTACATTTATGTTGCCTGCGTACTTACCAAACAGTAATAACGACACACACATGCATGACGCTGATAAAGTTCCAATAATACAGATTGATTGTAATGTACTCGATACCAAGTTATTACGCATTCAAGGCAGTTCATTACCCAAACACCTTTAACAGAACTCAAAGGATGAGTTACAACGGTTTTATTATACAAGAtgagaatattttctaaacatttactGGCGTTCTAGCCGTTTTTTTCAAAAGGGAAGCAATATTTGAAGGGTACtatttttgatcatttgaaaGTGACactaaagtttttttgttgtttttttttttaattttttcaacgaTTCTGCAAAATGGTAAATTgtaaatatatcaacaaaattttatgcaTTCACCtatatattttcattctttattcAGTACGTCAATATTTGTAGTATTTGTGTTGCacattatttatgaaataaatttctgaaatggataaaatataa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F6VAN0	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Mus musculus OX=10090 GN=Atf6 PE=1 SV=2
G3V909	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Rattus norvegicus OX=10116 GN=Atf6 PE=2 SV=1
P18850	Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Homo sapiens OX=9606 GN=ATF6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005714 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSODKP00000032562.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR051882 all species →	Family	ATF bZIP Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46164 all species →	ATF6, ISOFORM C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09054	ATF6A; cyclic AMP-dependent transcription factor ATF-6 alpha	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.