Gene detail

Detailed information of ENSODKP00000032920.1 in Millepora complanata

Genomic Location: :...
NR annotation: XP_047134606.1, RNA polymerase-associated protein CTR9 homolog [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSODKT00000035407

ACACCATCCAGAGATAAATTGAAGGAGAAGAGACATCAAGAAAGAGCTATTGCCATGTTTAAGCAAGTGCTTCGAATTGACCCAAGAAATATATATGCAGCTAATGGAATTGATCGTACAGCGTAGAGGTGATGTTTTATCTGGCAAGGGCTTACTACAAAGCTGGTAGATTGGAAGATTGCAAACATTTATTGTTAAAGacTCGACACGTAGCACCTCACGACACGTTGCTCATGTTTAATTTGTCCTTAGTACAACAGAGGTTAGCAACAGGTGTCTTAAGAAACGAGAAAAGTCATTTGAAAGTTGTACTTTCGGCGGTGGCAGACCTGGAATTGGCACAAAGgAATTTCGATTATCTAAGTAAATATGGGGACAGAATGAAGTTCGATCTTGCCCATGCAAAATCTGAAGCAGGGCGTTGCTCTGATTTACTGAGTCAAGCACAATACCACGTGCAACGTGCGCGACGTGTTGACGAACAAGAGAAAGAACTACGAAAGAGACAAGAAGAAGAACGGGAATTACTCAAAAAGAAAGTTGAAGAAGATGAGtTGAAATTGGCGCAACAACGAGAGGAAGAAAAGaaacaacttttagaaaaacGTGCTGAATATAAAAAGAAGACAGAAGGCCTACTCAAATTTTCCGCTGCAGAAATGGCAGCCAAAGAGAGAGCAGCTGCTAGAGCTagaaagAAAAGAGATATTTCAGATGACATAATAGCAACAAGCAGTGATGAAGATGACAATGAAGGAAACACAATGAGAAAGAAACTCAAAGAAAGGAAAAAGAAGGCAACAGAATACGATGCCAATGGCGAACCGATAGGAAAGAAGAGACGTCAAAAGAAACAACGAGAACCAAAAGCTCCCAAACCAAGGAAAGAACCAAAAATGACAGTAAAGCAACAGCGTAAAGTCAAATCAAAAGCAGTAGTGTCTTCGTCATCCTCAGACAGTTCGGATGCAAGTGATGATGAAGCGCCCAAGAAGAAATCCAGAGTTGCACCAGTCGACAAGTCTTCAAGCGACAGTGATCTGATCGCATCGGATATTAGCGATAAGGAAGCAAAATCCCCCGAGGTCAGTGAAGATGATATTGATAGCCCACCACCACagattgaaaaacaatttgaagccaaaaaaaaatctaaaaagaaagcaaaactcGACTTTGAAGAAGACTCTTCAAGTAGTGATGATGAAAAAGATCAGGCAAATgaggaaaactttgaaaagtcTGATAAAGAGGATGATGATGAGCCAAAATCGAAAAAGAAATCAAGGATCATTAGTTCATCGGAATCTGATAGCGGGGAAGAAGTAGATGTTAATACGCAGTGAGACAAGAACGCAAGTTCCCAGGCGTCATTGTTTTGATACTGCTGCCCGTTGTTTGAAATTGGTGAAACAGTTATCCCACCAAATTTGATTCGGCATCCCAGTCGCGGATATGGTCGAACAAGATTACCCAACAAGATTTCACTTTTGAATCCTGTAAATAGTAAATAATCTTCCCAGTTACTTCAAAGAAATAGGCAGAATGCCTTGTAAAAATAGCAGTCGAACGATAAGCAGAAGATGCTATTgcttttggataaaaaagaacTGAGCACACCGTTTCACTCTTAACCCAGTGATTAGACTGTAATGTACATTTTGTTACAGATATaacaagataaaaattatttgtacaCCTGTCTTGCTgtcatcatttaaattttgagGCTTTTGGATGTGGTGCataaattttctgttttcctgTCACATCAACCAATTTTTAGTAGCAGCAGTTTTAGGTAAATAAAGCAACTCgaacttttattgaataaaagttaaactatgaaatattaaacattaaagtCGGCTAAAAAGTACTacataagttatattttttaacaacgtGATATTAACAAAGGTGCACGGCCGTCTTCCGGAGCAACTGAATATACAAAGGAATGTCAAGGCCGTTTCAAATAGTTACACCCGCAAAGCTCTCTTGATTAAAAATAGGTACCAT

Protein

Uniprot

Uniprot term	Description
Q6DEU9	RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis OX=8364 GN=ctr9 PE=2 SV=1
Q4QR29	RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1
Q62018	RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR031101	Family	RNA polymerase-associated protein Ctr9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14027	RNA POLYMERASE-ASSOCIATED PROTEIN CTR9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000993	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593	Cellular Component	Cdc73/Paf1 complex	Interproscan