Detailed information of ENSODKP00000034990.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_012557587.1, transcription intermediary factor 1-alpha isoform X2 [Hydra vulgaris]
Species abbreviation MCOMP · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q64127Transcription intermediary factor 1-alpha OS=Mus musculus OX=10090 GN=Trim24 PE=1 SV=1
O15164Transcription intermediary factor 1-alpha OS=Homo sapiens OX=9606 GN=TRIM24 PE=1 SV=3
Q9UPN9E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens OX=9606 GN=TRIM33 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005605 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan
PF00439
all species →		BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487
all species →		DomainBromodomainInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036427
all species →		Homologous_superfamilyBromodomain-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45915
all species →		TRANSCRIPTION INTERMEDIARY FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000790
all species →		Cellular ComponentchromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSODKP00000034990.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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