Gene detail

Detailed information of ENSODKP00000037662.1 in Millepora complanata

Genomic Location: not available for this species
NR annotation: XP_054713370.1, aromatic-L-amino-acid decarboxylase-like [Uloborus diversus]
Species abbreviation MCOMP · all data for this species · gene families

Sequence

CDS

Transcript

ENSODKT00000040838

GCTGTTCCACGGTCAACTTTGGGCCACAGTCGaaggggcagcctcactaacccgatgttaatcactgcgtttgataCTTATTTGATCCGAAGATCACCGagagcctcataatgaggttgaGTCCCAAAGCTGGCCAAACAGAAGAGGAACTTGTCGTATATTAGCAAAACGACTGACTACAACAAATTCAATAAATCAAAgATTAAAGCGTAATAAAAATAATCTCTGGTGAAAAAACAGCGATAAAGATGGCAAGTATcgaagaatttagaaaatgtgGGAAAGAGATGATTGACTATGTGGCAGATTATTTGAAGAATATTTCTGAAAGAGACGTCCTCCCTGATGTTCAACCTGGTTTTTTAGAAAGTCTTATCCCTCCAAGTGCACCAGAAGATCCTCAGTCTTTCACAGAGATAATGAAAGATGTAGAAAACCTTATTATGCCGGGAATGACACATTGGAGGCATCCGATGTTCAATGCGTTTTATCCGACTGCTAACGGTACACCTTCAATTTTGGCTGATATTTTAAGCACAGCAACAAGTAGTATTGGGTTTTCCTGGATTTCCAGCCCTGTAATGACAGAACTGGAAATGATAATGATGGACTGGTTAGCAAAACTGATTGATTTGCCTGAATACTTTCTATTCTCCTCGAAGGGAAAGGGAGGAGGTGTTATCCATGGCACTTCAAGTGAGGCTACTTTGTACTGTGTGCTAGCTGCTAGACGTTACTATGAATCGCATTACAATGTTAATCAGCTTGTCATTTACGCATCAAGTAGTGCTCATAGTTGCGTAGAAAAAGCTGCTGTAATTGCTGGGGTAAAATTTAGACTCCTAGAGACTGATACAAACTATTCTTTAAGAGGAGAAACTTTAGCAAAAGCTATCGAGGAAGACAGAGATTTAGGACTTATCCCTATTTGTGTTGTGGCAACACTTGGAACTACCAATTCTTGTGCGTTTGATAACTTGGAGGAAATAGGAAAAGTGtgtcaagaagaaaaaatatggcTCCATGTTGATGCAGCCTATGCCGGGTCAACATTTATTTGTGAAGAATATCGTTATTTAATGAAAGGTATTAGATATGTAGATTCCTATACTTTTAATCCCCATAAGTGCTTGCAAATCAATTTTGACTGCTGTGTCTTATGGTTCAAGGACGCTACAAGAGCTACTAAGCCTTTAAATACGGACCCTCAATATTTGAGACATGATAACGAAGGCAAAATCCCTGACTATCGACATTGGCAAATTCCGCTTGGTAGAAGATTCCGTTCCTTAAAGATTTGGTTTACTTTAAGATTGTATGGGAAATGTGGGTTGCAACAACATGTGCGCAATCATATTCAATGTGCCAAAGATTTCGAAAGCTTAATTCGTTCTGATAAGGATTTTGAAATTGTTGCACCAGTGGTGTTAGGACTTGTCTGTTTTCGCTTGAAAGGTAGTAAtgcattaaatgaaaaattgaacgGTAACGTAAACAAGGAGAGAAAGATGTTTATGTCACCAGGACGATTGGGTgatatgtattttttaagatattcagtTGGATCAGGtacagaaaataaatatgtgaaaacaGGATATGACATTTTAAGAAATTATGCAaacaaattacttgaaaaatagcCCGGCTGATACGGCTGCGTTTGATAAAttgaacaactaatttttcatTGCGTAAAAGGAAGACCCACACAATGACCCCATACATCATTTGACcctatacactgcgtgaaaagtgttcaaatttagatatttttttgtatttagacTGAATGCAGGGATTTACGGattaaatcttcgtattcagccGGAATgaaggaaaatacggaccagaaaaagcttcGAATTCAGAAACTTTTTACGGAATAACAAAGACGTTCTGTGCAGTTATTTGAAGATTTAATAGATAATGAGTAATAAGAAAATTGGAAGTTATTCTTGCTTCATTCaactttaatcttttgtttttaaactgaCAAGTTCTTGTACCATCTGTTTTTATATATCTCATTTGGATTATACAAACAGTCGTATCAAGAAAGTAACCGTACAATTGGGTTCTGAGGAAATGctattgaatgaaaaaatttggaaaatatctaGAGAAAATATCTGCAACagagggtattttttgtaaatttgcacagcagaaaatatgccagaatactcGTTTTCTCTAACCTGTATTtttccgtataaggacagaatctggGATTCTATGACTATAAGGGAAAATATGGGTCATAGAAAACCCTAATCCCGACATATTTTACGCGTTGGTTACACTTGGTCgtaaattttttccaaagaatttttcaaaaatttccaaagtGGCAGAAAGTGGTATATTTGGGACCCTGCCAAGTATCTATGAGTGAACCTTTTGAAAAGATAGATAGAGGCTTTTATCAGCATAGAATAGAACAAGGTAAATTATCTGATCTTGTACGATCAGTAGTGCTTAGGAAAGCGGGTTTTCCCTGACCTGTGATAATTATGCGTAGTGTAATTGTCGATAGTTCTCTGAATCTttcgcagtttttgtaaaaatacagaATGAAAGGTTccattaaatttgtaaatttttgtctgGAGTCTATAAGTTTGTTTGGCATTAAGTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14173	Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1
O88533	Aromatic-L-amino-acid decarboxylase OS=Mus musculus OX=10090 GN=Ddc PE=1 SV=1
P22781	Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus OX=10141 GN=DDC PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005722 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282 all species →	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR010977 all species →	Family	Aromatic-L-amino-acid decarboxylase	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR002129 all species →	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11999 all species →	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016831 all species →	Molecular Function	carboxy-lyase activity	Interproscan
GO:0004058 all species →	Molecular Function	aromatic-L-amino-acid decarboxylase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006584 all species →	Biological Process	catecholamine metabolic process	Interproscan
GO:0042427 all species →	Biological Process	serotonin biosynthetic process	Interproscan
GO:0016830 all species →	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0019752 all species →	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01593	DDC, TDC; aromatic-L-amino-acid/L-tryptophan decarboxylase	EC:4.1.1.28 EC:4.1.1.105	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.