Genomic Location: :...
NR annotation: XP_047130369.1, THO complex subunit 6 homolog isoform X3 [Hydra vulgaris]
| CDS | |||||
| ENSODKT00000041174 | |||||
| Transcript |
| ENSODKT00000041174 |
| Protein |
| ENSODKP00000037947.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21031 | WDR54 | WDR54 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR049546 | Repeat | WD repeat-containing protein 54-like beta-propeller | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR042626 | Family | THO complex subunit 6 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44411 | THO COMPLEX SUBUNIT 6 HOMOLOG | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000346 | Cellular Component | transcription export complex | Interproscan |
| GO:0000347 | Cellular Component | THO complex | Interproscan |
| GO:0006406 | Biological Process | mRNA export from nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13175 | THOC6; THO complex subunit 6 | - | Spliceosome | ko03041 | deepkoala |