Gene detail

Detailed information of ENSOFVP00000001031.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020628138.1, heat shock factor protein 1-like isoform X1 [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

ENSOFVT00000001138

TCTACCGCAAAGTCGagtaaaatttgtttactctcTCGAAGGTCAGCGACGCCCTCTGAGATTGAAACCCAGACCTCGACGCGTTTTAGGTCTCAAGGGATATAAAACCTGCGCGCGGGGGATGAAAAAATATGGCCGGGCTGTGAAGCGCTTGGGTAACTTATGCTTCTTTCGTCTGCACGCGAGCACACCAGCGAGAAAGCAATTTTCTTTGGGGGTCTATGAAAAGAATGCCGATGAAGACGGGAGACGGAGATTCGAGCGGTATTCCATCTAACGTCCCTGCGTTTTTAGTGAAACTGTGGAAACTGGTTGAAGATCCACAATACGAAGAGCACATTTCATGGAACAAGAATGGAAGCGGATTCCTGGTCCACGATCAGGCTACGTTTGCACGCGAAATCCTTCCCAAGTATTTCAAGCACAACAACTTTGCAAGCTTCGTTCGCCAGCTGAATATGTATGGCTTTCGAAAAGTCATTGGTGCTGAGCAAGGAGGTCTGCGGTCAGAGAAGGATGAGTGGGAATTTTTTAATGGAAATTTCAACAAGTATCATCCTGAATTGTTGGAGAATGTCAAGAGAAAGgcTACACcggaagaaaagaaaatgaaaaatgagGATGTGTCTAAAGTGTTGAATGATGTACAAGACATGAAAGGACGACAGGATGAAATGACCATGAAGCTTGACCAAATTAAGAGGGAAAATGTGACTCTTTGGAATGAGCTGGTAGAGTTGAGACAAAAACATCAAAGGCAACAGCAGATTGTCAACAAGTTGTTCCAGTATCTGATGCGCCTGATTTATCAAAATGATAAGCTCATGAATAGGAAAAGGTTGATGCTCCAGGACAGTACAGAGGAGCaatcttcttcttcctcttctccCAAGAGAGGACGATATGAATACAGAGATGGGTCTGGACCTAGCAGTGGGCAGCCTCCACCGAGCTACACTGCCCAGAGACCAAGCACTCAGACCCTCACAATCTCTGATATATCGAATGCTCCTTCATCAAGTGCTTCTACGAGTGGCCCACTAATAACTGCTTTACCAGATGATGACACTATCTCACATGCCAGACCGGTCATTAGGTTCCCGGAGGAGTCAGTACCATCGTCACAGCCTATTGTGTCTAGTCCTGTGTCTACATCAGCAACACCATCTTACCCACAAGCCTCAGTTGTTCACACACAGCCGTCAATGGGTGTGGTCACTTTTCCTGAGGAGCAGACACCTGTTGTGCACCCATCGCATGTGATAGAGCCTCAACAGTACGATGAGCGTCATCCTAGTTTAAGAAATATTCCTTTGACGCAGCGACTGTCTCAGGAAGATATCTCAGAGAGGAATTACATTGGTGACCAGGTGGACTACATTTCACAGAACCTTGATAACATCCAGTTTCAACTGGCAAATCAGTCTATGGTGTTGGATAATAGTTTATTCTATGATGTATTTGGCCATGAAGGGGTCCCTCCAGGCCAGGATCCCCTTGATCTTTTAGCTGACCGTGCTGCAGCGAGTCCTCTTCCAGGCGTTGGTCATAGTTCATCACAAGGTCACGAGCTCGTGCAGTATGGAATGCAGGGATCTGGCGCCAACAGCGGCGTTCCCCGGGGACCTCCGAGGTCCAGAGAACGTGAAGACCAATACGGACGAAGAGAGTGGCCCCAGGGACAGCAACATCCTGATTATGACGTTGTGCAGCACCTCTTCAACGGTTGAGACATTTTAATGCAAGTTCTTAACCGTATAGCTCTTAACTTGATCTTGGTGATGGTTTTAAAAGTGTAGCATTATTTTATTACATTGGTTATAAGCGAAAGCTCTCTTACTTTAGTCGATATTTTTAGTCAGTGTTGAATTTAGCAAAACAGAGCAAAGTTGAAGAGATTTCTGTTGACTTTCACACTGCGGATGAGAACCTTATGAACCAATAAGACTTGAACGACGTTCAATGAAAAGGGCGGGAAATGTCGCCAGTCGCCGGCCACGAAAAGTACAACGAGCCAATGAGAGCTTGAAGTGACAAAACGGCTGCCGgtgaaaagcgcgggaaagtcATGTTTGGGTTTTACTTGTGACTACTCTGATTGGTTGGGGCTTATTTCGTCGTTAACCAATCACTAAGCTCAGTTATTGCAAAACAGCAAACAGTAAACTTCTCTCGAAGTCGCCGGAGAACCGCTCCATCGTTTATTCAACCAGCAACCAGATTATAACCTTGTTATTGCACTTAATATTTTTAAAGCATTGTATAGTGTAACTCAGCTATAACTGTGACTAACTAAAATTAACAGGAGGTCTTGACCTACAATAGGCTAAATTGTAGTAACGCAACTTTAAAATTTATCTACTTGTACATTATGTTAAGTACAAACGACATTTTACAACCTAGCAAAAAACAATAAGCTCTTTATATTCAAGAGGTAGGCTTTTTAATGATTTAAGGGGTTGAACTTCTGCTTGTTAGAACGAGGTGTGAAGTAGTACAAAATACAtataaaaaaactaaaaataaataaagtatctAAGTAAAAGAGTTGAAGCATTGTATGTGTCTTCTTGCGTTATCTCGTTTTGCCACGTTATTGAGCGGCGAGGCAGTTGTccgtttcgtaaacggtcgatgccaatTTCGCGACACTTGGAAATATTTTAACTGTTAACGAATTCTTCTCTACGAAATtaaggaaaaagaaaacttgTAATTAACCACCCAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08DJ8	Heat shock factor protein 1 OS=Bos taurus OX=9913 GN=HSF1 PE=2 SV=1
P38529	Heat shock factor protein 1 OS=Gallus gallus OX=9031 GN=HSF1 PE=1 SV=1
P38532	Heat shock factor protein 1 OS=Mus musculus OX=10090 GN=Hsf1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003444 (this species only)
Transcription factor family	HSF · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00447 all species →	HSF_DNA-bind	HSF-type DNA-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000232 all species →	Domain	Heat shock factor (HSF)-type, DNA-binding	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR027725 all species →	Family	Heat shock transcription factor family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10015 all species →	HEAT SHOCK TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09414	HSF1; heat shock transcription factor 1	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.