Gene detail

Detailed information of ENSOFVP00000001343.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_027052217.1, Wilms tumor protein 1-interacting protein homolog isoform X2 [Pocillopora damicornis]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B7ZUL2	LIM domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=limd1 PE=2 SV=1
A6NIX2	Wilms tumor protein 1-interacting protein OS=Homo sapiens OX=9606 GN=WTIP PE=1 SV=3
Q06BR1	LIM domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=limd1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002717 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412 all species →	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR047172 all species →	Family	Ajuba-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24219 all species →	LIM DOMAIN-CONTAINING PROTEIN JUB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0001666 all species →	Biological Process	response to hypoxia	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0035331 all species →	Biological Process	negative regulation of hippo signaling	Interproscan
GO:2000637 all species →	Biological Process	positive regulation of miRNA-mediated gene silencing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOFVP00000001343.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.