Detailed information of ENSOFVP00000001411.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020619761.1, tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like [Orbicella faveolata]
Species abbreviation CSALA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4IGH4tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 OS=Danio rerio OX=7955 GN=wdr4 PE=2 SV=2
Q7ZY78tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 OS=Xenopus laevis OX=8355 GN=wdr4 PE=2 SV=2
Q5FVB6tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 OS=Xenopus tropicalis OX=8364 GN=wdr4 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006013 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for ENSOFVP00000001411.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR028884
all species →		FamilytRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16288
all species →		WD40 REPEAT PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0036265
all species →		Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527
all species →		Cellular ComponenttRNA methyltransferase complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOFVP00000001411.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP