Gene detail

Detailed information of ENSOFVP00000001686.1 in Cyphastrea salae

Genomic Location: not available for this species
NR annotation: XP_020605841.1, tRNA wybutosine-synthesizing protein 2 homolog [Orbicella faveolata]
Species Cyphastrea salae · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q58D65	tRNA wybutosine-synthesizing protein 2 homolog OS=Bos taurus OX=9913 GN=TRMT12 PE=2 SV=1
Q4V8B8	tRNA wybutosine-synthesizing protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Trmt12 PE=2 SV=2
Q53H54	tRNA wybutosine-synthesizing protein 2 homolog OS=Homo sapiens OX=9606 GN=TRMT12 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007857 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02475 all species →	Met_10	Met-10+ like-protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030382 all species →	Domain	SAM-dependent methyltransferase TRM5/TYW2-type	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23245 all species →	TRNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008175 all species →	Molecular Function	tRNA methyltransferase activity	Interproscan
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan
GO:0031591 all species →	Biological Process	wybutosine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07055	TRM12, TYW2; tRNA wybutosine-synthesizing protein 2	EC:2.5.1.114	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.