Detailed information of ENSOFVP00000001999.1 in Cyphastrea salae

Genomic Location: :...
NR annotation: XP_020601384.1, splicing factor 3B subunit 3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A0JN52Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1
Q15393Splicing factor 3B subunit 3 OS=Homo sapiens OX=9606 GN=SF3B3 PE=1 SV=4
Q921M3Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12830SF3B3, SAP130, RSE1; splicing factor 3B subunit 3-Chromosome and associated proteinsko03036deepkoala

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